Strain Fitness in Pseudomonas putida KT2440 around PP_2077

Experiment: 2-Ethylhexanol 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Ethylhexanol 0.4 vol%
2,363,324	-		PP_2076	0.80	-1.5
2,363,399	-		PP_2076	0.82	+1.5
2,363,399	-		PP_2076	0.82	-1.4
2,363,399	-		PP_2076	0.82	-0.2
2,363,489	-		PP_2076	0.86	-1.1
2,363,489	-		PP_2076	0.86	-0.4
2,363,537	-		PP_2076	0.88	-1.0
2,363,827	+				-0.9
2,363,827	+				-0.1
2,363,827	+				-0.2
2,363,827	+				-1.2
2,363,827	+				-1.5
2,363,827	+				-1.0
2,363,827	+				-1.0
2,363,828	-				-0.0
2,363,828	-				-0.9
2,363,828	-				+1.0
2,363,828	-				-0.3
2,363,828	-				+0.2
2,363,828	-				-0.8
2,363,829	+				-1.3
2,363,830	-				-0.7
2,363,830	-				+0.1
2,363,848	+				-0.0
2,363,849	-				+0.5
2,363,936	+				-1.2
2,363,936	+				-2.7
2,363,945	-				-2.3
2,364,071	+				-2.0
2,364,210	+				-0.4
2,364,283	-				+0.4
2,364,318	+				-2.0
2,364,319	-				+0.1
2,364,319	-				+0.5
2,364,343	-		PP_2077	0.11	-0.2
2,364,488	+		PP_2077	0.23	-1.3
2,364,488	+		PP_2077	0.23	-0.6
2,364,489	-		PP_2077	0.23	-0.9
2,364,537	+		PP_2077	0.27	-0.3
2,364,537	+		PP_2077	0.27	-2.1
2,364,578	-		PP_2077	0.30	+0.1
2,364,589	+		PP_2077	0.31	-1.6
2,364,589	+		PP_2077	0.31	-1.4
2,364,590	-		PP_2077	0.31	-0.4
2,364,633	+		PP_2077	0.34	-1.0
2,364,634	-		PP_2077	0.34	-0.7
2,364,876	+		PP_2077	0.54	+0.5
2,365,322	+				+0.8
2,365,322	+				+1.0
2,365,322	+				+0.5
2,365,322	+				-0.8
2,365,322	+				+0.7
2,365,377	+				-0.5
2,365,377	+				+0.8
2,365,378	-				-0.6
2,365,378	-				-1.5
2,365,386	-				-0.5
2,365,386	-				-0.0
2,365,456	+				+0.6
2,365,456	+				+0.8
2,365,456	+				-0.6
2,365,456	+				-0.3
2,365,457	-				+0.3
2,365,457	-				-0.8
2,365,457	-				+0.0
2,365,457	-				-0.9
2,365,458	+				+0.1
2,365,458	+				-0.3
2,365,459	-				+0.2
2,365,459	-				+0.1
2,365,459	-				-0.3
2,365,535	-				-0.5
2,365,559	-				+0.4
2,365,784	+		PP_2078	0.24	-1.1
2,366,036	+		PP_2078	0.52	-0.0
2,366,138	+		PP_2078	0.63	-0.0
2,366,165	-		PP_2078	0.66	+0.5
2,366,377	-		PP_2078	0.90	+0.5
2,366,377	-		PP_2078	0.90	-0.7
2,366,377	-		PP_2078	0.90	-2.0