Strain Fitness in Pseudomonas putida KT2440 around PP_1259

Experiment: 2-Ethylhexanol 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Ethylhexanol 0.4 vol%
1,437,168	-				+0.2
1,437,168	-				+1.1
1,437,168	-				+0.2
1,437,341	+		PP_1258	0.25	-1.0
1,437,342	-		PP_1258	0.25	+0.7
1,437,342	-		PP_1258	0.25	+0.2
1,437,342	-		PP_1258	0.25	+0.1
1,437,479	+		PP_1258	0.40	-0.1
1,437,480	-		PP_1258	0.40	+0.6
1,437,736	+		PP_1258	0.68	+0.1
1,437,737	-		PP_1258	0.68	-0.4
1,437,843	-		PP_1258	0.80	+0.7
1,437,843	-		PP_1258	0.80	+0.9
1,438,023	+				+0.6
1,438,049	+				-1.1
1,438,050	-				-0.5
1,438,085	+				+0.6
1,438,168	+				-0.8
1,438,171	+				-1.9
1,438,172	-				+0.1
1,438,172	-				+0.0
1,438,172	-				-0.6
1,438,172	-				-2.6
1,438,424	-		PP_1259	0.23	-0.9
1,438,550	-		PP_1259	0.31	-0.2
1,438,550	-		PP_1259	0.31	+0.6
1,438,724	-		PP_1259	0.41	-0.2
1,438,750	+		PP_1259	0.43	-0.4
1,438,750	+		PP_1259	0.43	-1.2
1,438,750	+		PP_1259	0.43	-0.1
1,438,750	+		PP_1259	0.43	+0.7
1,438,751	-		PP_1259	0.43	+0.3
1,438,751	-		PP_1259	0.43	+0.6
1,438,751	-		PP_1259	0.43	-0.2
1,438,751	-		PP_1259	0.43	+0.2
1,438,751	-		PP_1259	0.43	-0.0
1,438,802	-		PP_1259	0.46	+0.9
1,439,042	-		PP_1259	0.61	-0.9
1,439,148	+		PP_1259	0.68	+1.0
1,439,338	+		PP_1259	0.79	-0.6
1,439,411	-		PP_1259	0.84	-1.0
1,439,434	+		PP_1259	0.85	-0.1
1,439,491	+		PP_1259	0.89	-0.6
1,439,491	+		PP_1259	0.89	+0.3
1,439,492	-		PP_1259	0.89	-1.3
1,439,512	-				-0.1
1,439,643	+				+0.1
1,439,643	+				+0.1
1,439,643	+				+0.6
1,439,698	-				-0.7
1,439,772	+				-0.0
1,439,772	+				+1.1
1,439,995	-				+0.6