Strain Fitness in Pseudomonas putida KT2440 around PP_0958

Experiment: 2-Ethylhexanol 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Ethylhexanol 0.4 vol%
1,099,602	-				-0.6
1,099,649	+				-0.4
1,099,649	+				-1.0
1,099,718	+				+0.7
1,099,718	+				-0.6
1,099,719	-				-2.6
1,099,719	-				-1.5
1,099,720	+				-3.8
1,099,720	+				-1.6
1,099,720	+				-2.3
1,099,720	+				-0.9
1,099,720	+				-2.7
1,099,721	-				-2.9
1,099,721	-				-2.2
1,099,721	-				-1.0
1,099,721	-				-1.4
1,099,721	-				-2.2
1,099,721	-				-1.0
1,099,721	-				-2.1
1,099,721	-				-2.0
1,099,783	+				+0.2
1,099,783	+				-0.3
1,099,799	+				-0.7
1,099,800	-				-2.7
1,099,811	+				-1.2
1,099,812	-				-1.9
1,099,855	-				-2.1
1,100,007	+		PP_0958	0.24	-0.9
1,100,007	+		PP_0958	0.24	-1.2
1,100,008	-		PP_0958	0.24	-3.4
1,100,008	-		PP_0958	0.24	-2.1
1,100,008	-		PP_0958	0.24	-2.4
1,100,152	+		PP_0958	0.42	-1.2
1,100,153	-		PP_0958	0.42	-3.3
1,100,316	-		PP_0958	0.62	+0.2
1,100,453	+		PP_0958	0.79	-1.2
1,100,453	+		PP_0958	0.79	-1.4
1,100,454	-		PP_0958	0.79	-3.2
1,100,459	+		PP_0958	0.80	-0.4
1,100,459	+		PP_0958	0.80	-0.8
1,100,459	+		PP_0958	0.80	-2.3
1,100,459	+		PP_0958	0.80	-2.8
1,100,460	-		PP_0958	0.80	-3.0
1,100,460	-		PP_0958	0.80	-2.8
1,100,460	-		PP_0958	0.80	-2.3
1,100,460	-		PP_0958	0.80	-0.0
1,100,460	-		PP_0958	0.80	-2.9
1,100,460	-		PP_0958	0.80	-2.1
1,100,466	+		PP_0958	0.80	-0.0
1,100,466	+		PP_0958	0.80	-2.0
1,100,467	-		PP_0958	0.81	-1.4
1,100,467	-		PP_0958	0.81	-3.6
1,100,742	+		PP_0959	0.15	+1.0
1,100,780	-		PP_0959	0.20	-1.2
1,100,876	-		PP_0959	0.32	-2.8
1,101,059	-		PP_0959	0.55	+0.2
1,101,133	-		PP_0959	0.64	-1.8
1,101,356	-				-1.8
1,101,356	-				-2.3
1,101,388	-				-2.3
1,101,388	-				-1.1
1,101,388	-				-2.4
1,101,533	+		PP_0960	0.23	-3.0
1,101,533	+		PP_0960	0.23	-2.3
1,101,533	+		PP_0960	0.23	-2.7
1,101,534	-		PP_0960	0.23	-1.5
1,101,534	-		PP_0960	0.23	-2.5
1,101,534	-		PP_0960	0.23	-1.6
1,101,534	-		PP_0960	0.23	-2.4
1,101,534	-				+1.6
1,101,538	-		PP_0960	0.24	-3.5
1,101,538	-		PP_0960	0.24	-2.4
1,101,538	-		PP_0960	0.24	-2.5
1,101,540	-		PP_0960	0.25	-2.8
1,101,552	+		PP_0960	0.27	-1.7
1,101,552	+		PP_0960	0.27	-0.1
1,101,553	-		PP_0960	0.27	-2.3