Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2695

Experiment: LB_plus_SM_buffer with 6F2_phage 15 MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF2694 and GFF2695 are separated by 465 nucleotides GFF2694 - FIG01046389: hypothetical protein, at 214,713 to 215,309 GFF2694 GFF2695 - Putative inner membrane protein, at 215,775 to 216,752 GFF2695 Position (kb) 215 216 217Strain fitness (log2 ratio) -2 -1 0 1 2at 214.918 kb on - strand, within GFF2694at 214.950 kb on + strand, within GFF2694at 215.013 kb on + strand, within GFF2694at 215.014 kb on - strand, within GFF2694at 215.014 kb on - strand, within GFF2694at 215.026 kb on - strand, within GFF2694at 215.410 kb on + strandat 215.483 kb on + strandat 215.574 kb on + strandat 215.575 kb on - strandat 216.171 kb on - strand, within GFF2695at 216.623 kb on + strand, within GFF2695at 216.627 kb on - strand, within GFF2695at 216.627 kb on - strand, within GFF2695at 217.192 kb on + strandat 217.334 kb on + strandat 217.406 kb on + strandat 217.438 kb on - strandat 217.438 kb on - strandat 217.495 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with 6F2_phage 15 MOI
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214,918 - GFF2694 0.34 -0.4
214,950 + GFF2694 0.40 +0.6
215,013 + GFF2694 0.50 +1.9
215,014 - GFF2694 0.50 +0.2
215,014 - GFF2694 0.50 +0.3
215,026 - GFF2694 0.52 -2.4
215,410 + -0.8
215,483 + -1.6
215,574 + +0.3
215,575 - +0.2
216,171 - GFF2695 0.40 -0.7
216,623 + GFF2695 0.87 -1.2
216,627 - GFF2695 0.87 -0.6
216,627 - GFF2695 0.87 +0.1
217,192 + -0.0
217,334 + -0.4
217,406 + +0.1
217,438 - -0.7
217,438 - -0.6
217,495 - -0.1

Or see this region's nucleotide sequence