Experiment: L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1534 and PfGW456L13_1535 are separated by 215 nucleotides PfGW456L13_1535 and PfGW456L13_1536 are separated by 16 nucleotides PfGW456L13_1536 and PfGW456L13_1537 overlap by 1 nucleotides
PfGW456L13_1534 - FIG00955330: hypothetical protein, at 1,686,325 to 1,687,881
_1534
PfGW456L13_1535 - Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-), at 1,688,097 to 1,690,316
_1535
PfGW456L13_1536 - FOG: TPR repeat, at 1,690,333 to 1,691,070
_1536
PfGW456L13_1537 - Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C), at 1,691,070 to 1,691,405
_1537
Position (kb)
1688
1689
1690
1691 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1687.145 kb on + strand, within PfGW456L13_1534 at 1687.146 kb on - strand, within PfGW456L13_1534 at 1687.146 kb on - strand, within PfGW456L13_1534 at 1687.146 kb on - strand, within PfGW456L13_1534 at 1687.236 kb on + strand, within PfGW456L13_1534 at 1687.573 kb on + strand, within PfGW456L13_1534 at 1687.574 kb on - strand, within PfGW456L13_1534 at 1687.574 kb on - strand, within PfGW456L13_1534 at 1687.574 kb on - strand, within PfGW456L13_1534 at 1687.574 kb on - strand, within PfGW456L13_1534 at 1687.574 kb on - strand, within PfGW456L13_1534 at 1687.574 kb on - strand, within PfGW456L13_1534 at 1687.574 kb on - strand, within PfGW456L13_1534 at 1687.574 kb on - strand, within PfGW456L13_1534 at 1687.574 kb on - strand, within PfGW456L13_1534 at 1687.574 kb on - strand, within PfGW456L13_1534 at 1687.574 kb on - strand, within PfGW456L13_1534 at 1687.577 kb on + strand, within PfGW456L13_1534 at 1687.577 kb on + strand, within PfGW456L13_1534 at 1687.577 kb on + strand, within PfGW456L13_1534 at 1687.577 kb on + strand, within PfGW456L13_1534 at 1687.577 kb on + strand, within PfGW456L13_1534 at 1687.578 kb on - strand, within PfGW456L13_1534 at 1687.578 kb on - strand, within PfGW456L13_1534 at 1687.578 kb on - strand, within PfGW456L13_1534 at 1687.578 kb on - strand, within PfGW456L13_1534 at 1687.650 kb on - strand, within PfGW456L13_1534 at 1687.761 kb on + strand at 1687.761 kb on + strand at 1687.762 kb on - strand at 1687.762 kb on - strand at 1687.762 kb on - strand at 1687.762 kb on - strand at 1687.762 kb on - strand at 1687.762 kb on - strand at 1687.762 kb on - strand at 1687.763 kb on + strand at 1687.763 kb on + strand at 1687.763 kb on + strand at 1687.763 kb on + strand at 1687.763 kb on + strand at 1687.764 kb on - strand at 1687.764 kb on - strand at 1687.764 kb on - strand at 1687.764 kb on - strand at 1687.764 kb on - strand at 1687.770 kb on - strand at 1687.797 kb on + strand at 1687.797 kb on + strand at 1687.797 kb on + strand at 1687.798 kb on - strand at 1687.798 kb on - strand at 1687.921 kb on + strand at 1687.921 kb on + strand at 1687.975 kb on + strand at 1687.976 kb on - strand at 1687.976 kb on - strand at 1687.976 kb on - strand at 1687.976 kb on - strand at 1687.984 kb on + strand at 1687.985 kb on - strand at 1687.985 kb on - strand at 1687.985 kb on - strand at 1687.985 kb on - strand at 1687.985 kb on - strand at 1687.985 kb on - strand at 1687.986 kb on + strand at 1687.986 kb on + strand at 1687.986 kb on + strand at 1687.986 kb on + strand at 1687.987 kb on - strand at 1687.987 kb on - strand at 1688.121 kb on + strand at 1688.122 kb on - strand at 1688.122 kb on - strand at 1688.184 kb on + strand at 1688.349 kb on + strand, within PfGW456L13_1535 at 1688.349 kb on + strand, within PfGW456L13_1535 at 1688.349 kb on + strand, within PfGW456L13_1535 at 1688.349 kb on + strand, within PfGW456L13_1535 at 1688.349 kb on + strand, within PfGW456L13_1535 at 1688.350 kb on - strand, within PfGW456L13_1535 at 1688.350 kb on - strand, within PfGW456L13_1535 at 1688.350 kb on - strand, within PfGW456L13_1535 at 1688.350 kb on - strand, within PfGW456L13_1535 at 1688.350 kb on - strand, within PfGW456L13_1535 at 1688.400 kb on + strand, within PfGW456L13_1535 at 1688.400 kb on + strand, within PfGW456L13_1535 at 1688.400 kb on + strand, within PfGW456L13_1535 at 1688.532 kb on + strand, within PfGW456L13_1535 at 1688.532 kb on + strand, within PfGW456L13_1535 at 1688.532 kb on + strand, within PfGW456L13_1535 at 1688.532 kb on + strand, within PfGW456L13_1535 at 1688.533 kb on - strand, within PfGW456L13_1535 at 1688.533 kb on - strand, within PfGW456L13_1535 at 1688.533 kb on - strand, within PfGW456L13_1535 at 1688.575 kb on - strand, within PfGW456L13_1535 at 1688.575 kb on - strand, within PfGW456L13_1535 at 1688.660 kb on + strand, within PfGW456L13_1535 at 1688.666 kb on + strand, within PfGW456L13_1535 at 1688.667 kb on - strand, within PfGW456L13_1535 at 1688.667 kb on - strand, within PfGW456L13_1535 at 1688.691 kb on + strand, within PfGW456L13_1535 at 1688.692 kb on - strand, within PfGW456L13_1535 at 1688.763 kb on + strand, within PfGW456L13_1535 at 1688.790 kb on + strand, within PfGW456L13_1535 at 1688.790 kb on + strand, within PfGW456L13_1535 at 1688.791 kb on - strand, within PfGW456L13_1535 at 1688.791 kb on - strand, within PfGW456L13_1535 at 1688.791 kb on - strand, within PfGW456L13_1535 at 1688.791 kb on - strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.940 kb on + strand, within PfGW456L13_1535 at 1688.941 kb on - strand, within PfGW456L13_1535 at 1688.941 kb on - strand, within PfGW456L13_1535 at 1688.941 kb on - strand, within PfGW456L13_1535 at 1688.941 kb on - strand, within PfGW456L13_1535 at 1688.954 kb on + strand, within PfGW456L13_1535 at 1689.415 kb on - strand, within PfGW456L13_1535 at 1689.415 kb on - strand, within PfGW456L13_1535 at 1689.444 kb on + strand, within PfGW456L13_1535 at 1689.444 kb on + strand, within PfGW456L13_1535 at 1689.445 kb on - strand, within PfGW456L13_1535 at 1689.522 kb on + strand, within PfGW456L13_1535 at 1689.522 kb on + strand, within PfGW456L13_1535 at 1689.522 kb on + strand, within PfGW456L13_1535 at 1689.523 kb on - strand, within PfGW456L13_1535 at 1689.523 kb on - strand, within PfGW456L13_1535 at 1689.523 kb on - strand, within PfGW456L13_1535 at 1689.542 kb on + strand, within PfGW456L13_1535 at 1689.555 kb on + strand, within PfGW456L13_1535 at 1689.555 kb on + strand, within PfGW456L13_1535 at 1689.556 kb on - strand, within PfGW456L13_1535 at 1689.576 kb on + strand, within PfGW456L13_1535 at 1689.576 kb on + strand, within PfGW456L13_1535 at 1689.576 kb on + strand, within PfGW456L13_1535 at 1689.577 kb on - strand, within PfGW456L13_1535 at 1689.577 kb on - strand, within PfGW456L13_1535 at 1689.577 kb on - strand, within PfGW456L13_1535 at 1689.577 kb on - strand, within PfGW456L13_1535 at 1689.625 kb on + strand, within PfGW456L13_1535 at 1689.625 kb on + strand, within PfGW456L13_1535 at 1689.626 kb on - strand, within PfGW456L13_1535 at 1689.626 kb on - strand, within PfGW456L13_1535 at 1689.729 kb on + strand, within PfGW456L13_1535 at 1689.729 kb on + strand, within PfGW456L13_1535 at 1689.729 kb on + strand, within PfGW456L13_1535 at 1689.729 kb on + strand, within PfGW456L13_1535 at 1689.729 kb on + strand, within PfGW456L13_1535 at 1689.729 kb on + strand, within PfGW456L13_1535 at 1689.729 kb on + strand, within PfGW456L13_1535 at 1689.730 kb on - strand, within PfGW456L13_1535 at 1689.859 kb on - strand, within PfGW456L13_1535 at 1689.916 kb on - strand, within PfGW456L13_1535 at 1690.097 kb on + strand at 1690.221 kb on + strand at 1690.221 kb on + strand at 1690.221 kb on + strand at 1690.221 kb on + strand at 1690.221 kb on + strand at 1690.221 kb on + strand at 1690.222 kb on - strand at 1690.222 kb on - strand at 1690.222 kb on - strand at 1690.222 kb on - strand at 1690.223 kb on + strand at 1690.224 kb on - strand at 1690.314 kb on + strand at 1690.314 kb on + strand at 1690.315 kb on - strand at 1690.315 kb on - strand at 1690.315 kb on - strand at 1690.367 kb on + strand at 1690.367 kb on + strand at 1690.368 kb on - strand at 1690.368 kb on - strand at 1690.389 kb on + strand at 1690.390 kb on - strand at 1690.394 kb on + strand at 1690.394 kb on + strand at 1690.394 kb on + strand at 1690.394 kb on + strand at 1690.394 kb on + strand at 1690.395 kb on - strand at 1690.395 kb on - strand at 1690.395 kb on - strand at 1690.395 kb on - strand at 1690.678 kb on + strand, within PfGW456L13_1536 at 1690.678 kb on + strand, within PfGW456L13_1536 at 1690.678 kb on + strand, within PfGW456L13_1536 at 1690.678 kb on + strand, within PfGW456L13_1536 at 1690.678 kb on + strand, within PfGW456L13_1536 at 1690.678 kb on + strand, within PfGW456L13_1536 at 1690.678 kb on + strand, within PfGW456L13_1536 at 1690.678 kb on + strand, within PfGW456L13_1536 at 1690.679 kb on - strand, within PfGW456L13_1536 at 1690.679 kb on - strand, within PfGW456L13_1536 at 1690.679 kb on - strand, within PfGW456L13_1536 at 1690.890 kb on - strand, within PfGW456L13_1536 at 1691.060 kb on + strand at 1691.060 kb on + strand at 1691.060 kb on + strand at 1691.060 kb on + strand at 1691.060 kb on + strand at 1691.061 kb on - strand at 1691.061 kb on - strand at 1691.061 kb on - strand at 1691.061 kb on - strand at 1691.061 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (N) remove 1,687,145 + PfGW456L13_1534 0.53 -0.6 1,687,146 - PfGW456L13_1534 0.53 +3.0 1,687,146 - PfGW456L13_1534 0.53 -0.3 1,687,146 - PfGW456L13_1534 0.53 -0.5 1,687,236 + PfGW456L13_1534 0.59 +0.7 1,687,573 + PfGW456L13_1534 0.80 -0.6 1,687,574 - PfGW456L13_1534 0.80 -1.2 1,687,574 - PfGW456L13_1534 0.80 -0.2 1,687,574 - PfGW456L13_1534 0.80 -1.0 1,687,574 - PfGW456L13_1534 0.80 +0.9 1,687,574 - PfGW456L13_1534 0.80 -0.4 1,687,574 - PfGW456L13_1534 0.80 -0.6 1,687,574 - PfGW456L13_1534 0.80 +0.7 1,687,574 - PfGW456L13_1534 0.80 -1.2 1,687,574 - PfGW456L13_1534 0.80 -0.3 1,687,574 - PfGW456L13_1534 0.80 -1.0 1,687,574 - PfGW456L13_1534 0.80 -0.3 1,687,577 + PfGW456L13_1534 0.80 -0.1 1,687,577 + PfGW456L13_1534 0.80 -1.1 1,687,577 + PfGW456L13_1534 0.80 +0.5 1,687,577 + PfGW456L13_1534 0.80 -1.3 1,687,577 + PfGW456L13_1534 0.80 -0.8 1,687,578 - PfGW456L13_1534 0.80 -0.7 1,687,578 - PfGW456L13_1534 0.80 -0.6 1,687,578 - PfGW456L13_1534 0.80 +0.1 1,687,578 - PfGW456L13_1534 0.80 +1.2 1,687,650 - PfGW456L13_1534 0.85 +0.2 1,687,761 + +0.1 1,687,761 + +0.9 1,687,762 - +1.1 1,687,762 - -2.1 1,687,762 - -1.2 1,687,762 - -0.6 1,687,762 - +0.1 1,687,762 - +0.8 1,687,762 - +0.3 1,687,763 + +0.3 1,687,763 + -0.9 1,687,763 + -1.1 1,687,763 + +0.2 1,687,763 + +2.2 1,687,764 - -2.4 1,687,764 - -0.0 1,687,764 - -0.4 1,687,764 - +0.3 1,687,764 - +0.9 1,687,770 - +0.5 1,687,797 + +0.2 1,687,797 + +1.7 1,687,797 + -1.5 1,687,798 - +0.7 1,687,798 - +0.2 1,687,921 + -0.2 1,687,921 + -1.6 1,687,975 + +0.2 1,687,976 - -0.8 1,687,976 - -0.2 1,687,976 - +0.5 1,687,976 - +0.7 1,687,984 + +1.2 1,687,985 - +0.1 1,687,985 - -0.8 1,687,985 - -2.0 1,687,985 - +0.9 1,687,985 - +0.2 1,687,985 - -0.0 1,687,986 + +1.7 1,687,986 + -0.6 1,687,986 + +0.6 1,687,986 + +0.4 1,687,987 - -0.8 1,687,987 - -1.8 1,688,121 + +0.3 1,688,122 - +1.0 1,688,122 - -2.0 1,688,184 + -0.6 1,688,349 + PfGW456L13_1535 0.11 -0.5 1,688,349 + PfGW456L13_1535 0.11 -0.1 1,688,349 + PfGW456L13_1535 0.11 +1.9 1,688,349 + PfGW456L13_1535 0.11 -0.4 1,688,349 + PfGW456L13_1535 0.11 -0.7 1,688,350 - PfGW456L13_1535 0.11 -0.2 1,688,350 - PfGW456L13_1535 0.11 -1.6 1,688,350 - PfGW456L13_1535 0.11 -0.3 1,688,350 - PfGW456L13_1535 0.11 -0.3 1,688,350 - PfGW456L13_1535 0.11 -1.7 1,688,400 + PfGW456L13_1535 0.14 -0.4 1,688,400 + PfGW456L13_1535 0.14 -2.3 1,688,400 + PfGW456L13_1535 0.14 -1.5 1,688,532 + PfGW456L13_1535 0.20 -0.8 1,688,532 + PfGW456L13_1535 0.20 -0.8 1,688,532 + PfGW456L13_1535 0.20 -1.3 1,688,532 + PfGW456L13_1535 0.20 -0.3 1,688,533 - PfGW456L13_1535 0.20 +0.5 1,688,533 - PfGW456L13_1535 0.20 -0.9 1,688,533 - PfGW456L13_1535 0.20 +0.1 1,688,575 - PfGW456L13_1535 0.22 -1.5 1,688,575 - PfGW456L13_1535 0.22 +0.3 1,688,660 + PfGW456L13_1535 0.25 -0.7 1,688,666 + PfGW456L13_1535 0.26 -2.4 1,688,667 - PfGW456L13_1535 0.26 +0.8 1,688,667 - PfGW456L13_1535 0.26 +0.5 1,688,691 + PfGW456L13_1535 0.27 -1.1 1,688,692 - PfGW456L13_1535 0.27 -2.0 1,688,763 + PfGW456L13_1535 0.30 -1.0 1,688,790 + PfGW456L13_1535 0.31 -1.3 1,688,790 + PfGW456L13_1535 0.31 -1.2 1,688,791 - PfGW456L13_1535 0.31 +0.3 1,688,791 - PfGW456L13_1535 0.31 -0.3 1,688,791 - PfGW456L13_1535 0.31 -0.7 1,688,791 - PfGW456L13_1535 0.31 +0.5 1,688,940 + PfGW456L13_1535 0.38 +0.8 1,688,940 + PfGW456L13_1535 0.38 +0.4 1,688,940 + PfGW456L13_1535 0.38 -1.7 1,688,940 + PfGW456L13_1535 0.38 -1.1 1,688,940 + PfGW456L13_1535 0.38 -2.2 1,688,940 + PfGW456L13_1535 0.38 +0.4 1,688,940 + PfGW456L13_1535 0.38 -1.0 1,688,940 + PfGW456L13_1535 0.38 -0.2 1,688,940 + PfGW456L13_1535 0.38 -1.0 1,688,940 + PfGW456L13_1535 0.38 +0.5 1,688,940 + PfGW456L13_1535 0.38 -0.7 1,688,940 + PfGW456L13_1535 0.38 -1.1 1,688,940 + PfGW456L13_1535 0.38 -1.6 1,688,940 + PfGW456L13_1535 0.38 -0.5 1,688,940 + PfGW456L13_1535 0.38 -0.2 1,688,941 - PfGW456L13_1535 0.38 -0.1 1,688,941 - PfGW456L13_1535 0.38 -0.5 1,688,941 - PfGW456L13_1535 0.38 -0.1 1,688,941 - PfGW456L13_1535 0.38 -0.6 1,688,954 + PfGW456L13_1535 0.39 +0.7 1,689,415 - PfGW456L13_1535 0.59 -1.9 1,689,415 - PfGW456L13_1535 0.59 -0.1 1,689,444 + PfGW456L13_1535 0.61 +0.3 1,689,444 + PfGW456L13_1535 0.61 -0.7 1,689,445 - PfGW456L13_1535 0.61 -1.2 1,689,522 + PfGW456L13_1535 0.64 -0.3 1,689,522 + PfGW456L13_1535 0.64 -0.1 1,689,522 + PfGW456L13_1535 0.64 +0.1 1,689,523 - PfGW456L13_1535 0.64 -0.6 1,689,523 - PfGW456L13_1535 0.64 +0.4 1,689,523 - PfGW456L13_1535 0.64 -0.2 1,689,542 + PfGW456L13_1535 0.65 +0.5 1,689,555 + PfGW456L13_1535 0.66 -1.1 1,689,555 + PfGW456L13_1535 0.66 -0.3 1,689,556 - PfGW456L13_1535 0.66 -0.9 1,689,576 + PfGW456L13_1535 0.67 -1.1 1,689,576 + PfGW456L13_1535 0.67 -0.1 1,689,576 + PfGW456L13_1535 0.67 -1.3 1,689,577 - PfGW456L13_1535 0.67 +1.1 1,689,577 - PfGW456L13_1535 0.67 +0.1 1,689,577 - PfGW456L13_1535 0.67 -1.0 1,689,577 - PfGW456L13_1535 0.67 -0.3 1,689,625 + PfGW456L13_1535 0.69 -1.1 1,689,625 + PfGW456L13_1535 0.69 -0.5 1,689,626 - PfGW456L13_1535 0.69 -1.3 1,689,626 - PfGW456L13_1535 0.69 +0.1 1,689,729 + PfGW456L13_1535 0.74 -0.9 1,689,729 + PfGW456L13_1535 0.74 -0.9 1,689,729 + PfGW456L13_1535 0.74 -0.3 1,689,729 + PfGW456L13_1535 0.74 -0.8 1,689,729 + PfGW456L13_1535 0.74 +0.2 1,689,729 + PfGW456L13_1535 0.74 -0.8 1,689,729 + PfGW456L13_1535 0.74 -0.3 1,689,730 - PfGW456L13_1535 0.74 -0.5 1,689,859 - PfGW456L13_1535 0.79 +0.1 1,689,916 - PfGW456L13_1535 0.82 +0.2 1,690,097 + +0.3 1,690,221 + -0.5 1,690,221 + -0.5 1,690,221 + +0.1 1,690,221 + -0.0 1,690,221 + +0.7 1,690,221 + -0.3 1,690,222 - -1.0 1,690,222 - -0.1 1,690,222 - -0.3 1,690,222 - -1.9 1,690,223 + -0.7 1,690,224 - -1.7 1,690,314 + -0.1 1,690,314 + -1.0 1,690,315 - +0.5 1,690,315 - +0.9 1,690,315 - +0.4 1,690,367 + -0.2 1,690,367 + +0.6 1,690,368 - +0.6 1,690,368 - +0.7 1,690,389 + +0.2 1,690,390 - -0.1 1,690,394 + +0.5 1,690,394 + -0.8 1,690,394 + -0.0 1,690,394 + -0.7 1,690,394 + -0.3 1,690,395 - +2.3 1,690,395 - -1.8 1,690,395 - +0.5 1,690,395 - +0.7 1,690,678 + PfGW456L13_1536 0.47 -0.8 1,690,678 + PfGW456L13_1536 0.47 +0.1 1,690,678 + PfGW456L13_1536 0.47 +0.7 1,690,678 + PfGW456L13_1536 0.47 -1.5 1,690,678 + PfGW456L13_1536 0.47 -1.6 1,690,678 + PfGW456L13_1536 0.47 +0.5 1,690,678 + PfGW456L13_1536 0.47 +0.7 1,690,678 + PfGW456L13_1536 0.47 +0.5 1,690,679 - PfGW456L13_1536 0.47 -1.0 1,690,679 - PfGW456L13_1536 0.47 +0.6 1,690,679 - PfGW456L13_1536 0.47 +1.3 1,690,890 - PfGW456L13_1536 0.75 -0.2 1,691,060 + +0.9 1,691,060 + +0.0 1,691,060 + -0.3 1,691,060 + -0.2 1,691,060 + +0.1 1,691,061 - +0.1 1,691,061 - +0.4 1,691,061 - -1.1 1,691,061 - +0.9 1,691,061 - +0.3
Or see this region's nucleotide sequence