Strain Fitness in Pseudomonas putida KT2440 around PP_0432

Experiment: 3-methyl-1-butanol 0.4 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 0.4 vol%
517,695	+		PP_0430	0.66	-0.6
517,695	+		PP_0430	0.66	-0.1
517,695	+		PP_0430	0.66	+0.1
517,696	-		PP_0430	0.67	+0.7
517,696	-		PP_0430	0.67	+0.0
517,726	-		PP_0430	0.70	+0.7
517,726	-		PP_0430	0.70	+0.7
517,726	-		PP_0430	0.70	-0.0
517,801	+		PP_0430	0.78	+0.3
518,007	+				+0.4
518,008	-				+0.3
518,008	-				-0.8
518,041	-				+0.8
518,041	-				-0.7
518,489	-				+2.6
518,505	+				-1.4
518,505	+				-2.2
518,505	+				+1.1
518,505	+				+0.6
518,506	-				+0.5
518,506	-				+0.8
518,506	-				-1.2
518,508	+				+0.0
518,508	+				+0.8
518,508	+				+0.5
518,509	-				+0.9
518,509	-				+0.1
518,509	-				+0.3
518,546	+				+2.5
518,547	-				+0.5
518,566	-				+0.3
518,568	+				+0.1
518,569	-				+0.3
518,598	-				+0.9
518,611	+				+0.5
518,747	+		PP_0432	0.13	-1.0
518,747	+		PP_0432	0.13	+0.0
518,748	-		PP_0432	0.13	-1.1
518,768	+		PP_0432	0.15	-0.5
518,768	+		PP_0432	0.15	+0.3
518,951	+		PP_0432	0.33	-0.2
518,996	+		PP_0432	0.37	-1.1
518,997	-		PP_0432	0.37	-0.6
518,997	-		PP_0432	0.37	-1.8
518,997	-		PP_0432	0.37	+0.2
519,367	+		PP_0432	0.73	-0.3
519,764	+				-2.0
520,142	+				-1.2
520,143	-				+0.1
520,155	+				-0.4
520,155	+				-0.7
520,205	+				+0.6
520,337	-		PP_0434	0.12	+2.8
520,343	+		PP_0434	0.13	+2.0
520,375	+		PP_0434	0.16	+2.7
520,375	+		PP_0434	0.16	+2.4
520,376	-		PP_0434	0.16	+2.1