Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2449

Experiment: m.b. pH5.5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2448 and B158DRAFT_2449 are separated by 312 nucleotidesB158DRAFT_2449 and B158DRAFT_2450 are separated by 185 nucleotides B158DRAFT_2448: B158DRAFT_2448 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 621,102 to 621,833 _2448 B158DRAFT_2449: B158DRAFT_2449 - TonB family C-terminal domain, at 622,146 to 623,378 _2449 B158DRAFT_2450: B158DRAFT_2450 - Predicted carboxypeptidase, at 623,564 to 624,691 _2450 Position (kb) 622 623 624Strain fitness (log2 ratio) -3 -2 -1 0 1at 621.193 kb on - strand, within B158DRAFT_2448at 621.241 kb on + strand, within B158DRAFT_2448at 621.257 kb on - strand, within B158DRAFT_2448at 621.257 kb on - strand, within B158DRAFT_2448at 621.321 kb on + strand, within B158DRAFT_2448at 621.393 kb on + strand, within B158DRAFT_2448at 621.438 kb on + strand, within B158DRAFT_2448at 621.438 kb on + strand, within B158DRAFT_2448at 621.438 kb on + strand, within B158DRAFT_2448at 621.438 kb on + strand, within B158DRAFT_2448at 621.446 kb on - strand, within B158DRAFT_2448at 621.446 kb on - strand, within B158DRAFT_2448at 621.446 kb on - strand, within B158DRAFT_2448at 621.446 kb on - strand, within B158DRAFT_2448at 621.446 kb on - strand, within B158DRAFT_2448at 621.446 kb on - strand, within B158DRAFT_2448at 621.581 kb on - strand, within B158DRAFT_2448at 621.582 kb on - strand, within B158DRAFT_2448at 621.602 kb on + strand, within B158DRAFT_2448at 621.781 kb on - strandat 621.858 kb on + strandat 621.866 kb on - strandat 622.014 kb on + strandat 622.014 kb on + strandat 622.014 kb on + strandat 622.014 kb on - strandat 622.014 kb on - strandat 622.022 kb on - strandat 622.024 kb on - strandat 622.224 kb on + strandat 622.232 kb on - strandat 622.243 kb on + strandat 622.259 kb on + strandat 622.264 kb on + strandat 622.272 kb on - strand, within B158DRAFT_2449at 622.272 kb on - strand, within B158DRAFT_2449at 622.272 kb on - strand, within B158DRAFT_2449at 622.272 kb on - strand, within B158DRAFT_2449at 622.274 kb on + strand, within B158DRAFT_2449at 622.277 kb on - strand, within B158DRAFT_2449at 622.284 kb on - strand, within B158DRAFT_2449at 622.364 kb on + strand, within B158DRAFT_2449at 622.372 kb on - strand, within B158DRAFT_2449at 622.385 kb on + strand, within B158DRAFT_2449at 622.393 kb on - strand, within B158DRAFT_2449at 622.397 kb on + strand, within B158DRAFT_2449at 622.405 kb on - strand, within B158DRAFT_2449at 622.457 kb on + strand, within B158DRAFT_2449at 622.460 kb on + strand, within B158DRAFT_2449at 622.465 kb on - strand, within B158DRAFT_2449at 622.470 kb on - strand, within B158DRAFT_2449at 622.507 kb on + strand, within B158DRAFT_2449at 622.507 kb on + strand, within B158DRAFT_2449at 622.507 kb on + strand, within B158DRAFT_2449at 622.507 kb on + strand, within B158DRAFT_2449at 622.507 kb on + strand, within B158DRAFT_2449at 622.515 kb on - strand, within B158DRAFT_2449at 622.560 kb on + strand, within B158DRAFT_2449at 622.560 kb on + strand, within B158DRAFT_2449at 622.560 kb on + strand, within B158DRAFT_2449at 622.560 kb on + strand, within B158DRAFT_2449at 622.560 kb on + strand, within B158DRAFT_2449at 622.560 kb on + strand, within B158DRAFT_2449at 622.560 kb on + strand, within B158DRAFT_2449at 622.568 kb on - strand, within B158DRAFT_2449at 622.568 kb on - strand, within B158DRAFT_2449at 622.568 kb on - strand, within B158DRAFT_2449at 622.568 kb on - strand, within B158DRAFT_2449at 622.573 kb on - strand, within B158DRAFT_2449at 622.588 kb on + strand, within B158DRAFT_2449at 622.596 kb on - strand, within B158DRAFT_2449at 622.691 kb on - strand, within B158DRAFT_2449at 622.701 kb on + strand, within B158DRAFT_2449at 622.701 kb on + strand, within B158DRAFT_2449at 622.701 kb on + strand, within B158DRAFT_2449at 622.701 kb on + strand, within B158DRAFT_2449at 622.701 kb on + strand, within B158DRAFT_2449at 622.709 kb on - strand, within B158DRAFT_2449at 622.730 kb on + strand, within B158DRAFT_2449at 622.730 kb on + strand, within B158DRAFT_2449at 622.738 kb on - strand, within B158DRAFT_2449at 622.738 kb on - strand, within B158DRAFT_2449at 622.739 kb on + strand, within B158DRAFT_2449at 622.808 kb on + strand, within B158DRAFT_2449at 622.830 kb on - strand, within B158DRAFT_2449at 622.845 kb on + strand, within B158DRAFT_2449at 622.863 kb on + strand, within B158DRAFT_2449at 622.863 kb on + strand, within B158DRAFT_2449at 622.863 kb on + strand, within B158DRAFT_2449at 622.863 kb on + strand, within B158DRAFT_2449at 622.863 kb on - strand, within B158DRAFT_2449at 622.890 kb on - strand, within B158DRAFT_2449at 622.914 kb on - strand, within B158DRAFT_2449at 622.933 kb on + strand, within B158DRAFT_2449at 622.950 kb on - strand, within B158DRAFT_2449at 622.981 kb on - strand, within B158DRAFT_2449at 623.055 kb on + strand, within B158DRAFT_2449at 623.063 kb on - strand, within B158DRAFT_2449at 623.063 kb on - strand, within B158DRAFT_2449at 623.109 kb on - strand, within B158DRAFT_2449at 623.129 kb on + strand, within B158DRAFT_2449at 623.178 kb on - strand, within B158DRAFT_2449at 623.182 kb on + strand, within B158DRAFT_2449at 623.189 kb on + strand, within B158DRAFT_2449at 623.189 kb on + strand, within B158DRAFT_2449at 623.197 kb on - strand, within B158DRAFT_2449at 623.216 kb on + strand, within B158DRAFT_2449at 623.221 kb on + strand, within B158DRAFT_2449at 623.229 kb on + strand, within B158DRAFT_2449at 623.229 kb on - strand, within B158DRAFT_2449at 623.247 kb on - strand, within B158DRAFT_2449at 623.265 kb on + strandat 623.265 kb on + strandat 623.294 kb on + strandat 623.294 kb on + strandat 623.294 kb on + strandat 623.302 kb on - strandat 623.382 kb on + strandat 623.390 kb on + strandat 623.390 kb on - strandat 623.390 kb on - strandat 623.406 kb on - strandat 623.475 kb on + strandat 623.475 kb on + strandat 623.483 kb on - strandat 623.487 kb on + strandat 623.661 kb on - strandat 623.842 kb on - strand, within B158DRAFT_2450at 623.867 kb on - strand, within B158DRAFT_2450at 623.915 kb on + strand, within B158DRAFT_2450at 623.943 kb on + strand, within B158DRAFT_2450at 623.951 kb on - strand, within B158DRAFT_2450at 623.951 kb on - strand, within B158DRAFT_2450at 623.951 kb on - strand, within B158DRAFT_2450at 624.015 kb on - strand, within B158DRAFT_2450at 624.053 kb on + strand, within B158DRAFT_2450at 624.065 kb on + strand, within B158DRAFT_2450at 624.065 kb on + strand, within B158DRAFT_2450at 624.077 kb on + strand, within B158DRAFT_2450at 624.077 kb on + strand, within B158DRAFT_2450at 624.077 kb on + strand, within B158DRAFT_2450at 624.085 kb on - strand, within B158DRAFT_2450at 624.085 kb on - strand, within B158DRAFT_2450at 624.087 kb on + strand, within B158DRAFT_2450at 624.087 kb on + strand, within B158DRAFT_2450at 624.120 kb on - strand, within B158DRAFT_2450at 624.307 kb on + strand, within B158DRAFT_2450at 624.350 kb on + strand, within B158DRAFT_2450at 624.358 kb on - strand, within B158DRAFT_2450at 624.360 kb on + strand, within B158DRAFT_2450

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. pH5.5
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621,193 - B158DRAFT_2448 0.12 -0.2
621,241 + B158DRAFT_2448 0.19 -0.4
621,257 - B158DRAFT_2448 0.21 +0.2
621,257 - B158DRAFT_2448 0.21 -0.3
621,321 + B158DRAFT_2448 0.30 +0.8
621,393 + B158DRAFT_2448 0.40 +0.2
621,438 + B158DRAFT_2448 0.46 +0.4
621,438 + B158DRAFT_2448 0.46 +1.1
621,438 + B158DRAFT_2448 0.46 +0.0
621,438 + B158DRAFT_2448 0.46 -0.2
621,446 - B158DRAFT_2448 0.47 +0.9
621,446 - B158DRAFT_2448 0.47 +0.1
621,446 - B158DRAFT_2448 0.47 +0.8
621,446 - B158DRAFT_2448 0.47 +0.2
621,446 - B158DRAFT_2448 0.47 -0.6
621,446 - B158DRAFT_2448 0.47 +0.0
621,581 - B158DRAFT_2448 0.65 -0.4
621,582 - B158DRAFT_2448 0.66 +0.5
621,602 + B158DRAFT_2448 0.68 -0.9
621,781 - -1.1
621,858 + +0.1
621,866 - +0.8
622,014 + -0.7
622,014 + +0.4
622,014 + -0.3
622,014 - -0.3
622,014 - -0.0
622,022 - +0.3
622,024 - -0.6
622,224 + -0.4
622,232 - -0.3
622,243 + -0.2
622,259 + +0.1
622,264 + -0.1
622,272 - B158DRAFT_2449 0.10 -0.2
622,272 - B158DRAFT_2449 0.10 -0.2
622,272 - B158DRAFT_2449 0.10 +0.1
622,272 - B158DRAFT_2449 0.10 -0.6
622,274 + B158DRAFT_2449 0.10 +0.3
622,277 - B158DRAFT_2449 0.11 +0.1
622,284 - B158DRAFT_2449 0.11 +0.2
622,364 + B158DRAFT_2449 0.18 +0.3
622,372 - B158DRAFT_2449 0.18 +0.0
622,385 + B158DRAFT_2449 0.19 +0.4
622,393 - B158DRAFT_2449 0.20 -0.4
622,397 + B158DRAFT_2449 0.20 -0.3
622,405 - B158DRAFT_2449 0.21 -0.4
622,457 + B158DRAFT_2449 0.25 -0.4
622,460 + B158DRAFT_2449 0.25 -0.1
622,465 - B158DRAFT_2449 0.26 -0.6
622,470 - B158DRAFT_2449 0.26 +0.2
622,507 + B158DRAFT_2449 0.29 -0.3
622,507 + B158DRAFT_2449 0.29 -0.4
622,507 + B158DRAFT_2449 0.29 -0.1
622,507 + B158DRAFT_2449 0.29 +0.7
622,507 + B158DRAFT_2449 0.29 -0.0
622,515 - B158DRAFT_2449 0.30 +0.7
622,560 + B158DRAFT_2449 0.34 +0.2
622,560 + B158DRAFT_2449 0.34 +0.1
622,560 + B158DRAFT_2449 0.34 +0.3
622,560 + B158DRAFT_2449 0.34 -0.3
622,560 + B158DRAFT_2449 0.34 -0.3
622,560 + B158DRAFT_2449 0.34 -0.5
622,560 + B158DRAFT_2449 0.34 -0.0
622,568 - B158DRAFT_2449 0.34 -0.1
622,568 - B158DRAFT_2449 0.34 -0.5
622,568 - B158DRAFT_2449 0.34 +0.2
622,568 - B158DRAFT_2449 0.34 +0.5
622,573 - B158DRAFT_2449 0.35 -0.4
622,588 + B158DRAFT_2449 0.36 -1.6
622,596 - B158DRAFT_2449 0.36 -0.7
622,691 - B158DRAFT_2449 0.44 -0.1
622,701 + B158DRAFT_2449 0.45 -0.2
622,701 + B158DRAFT_2449 0.45 -1.2
622,701 + B158DRAFT_2449 0.45 -0.1
622,701 + B158DRAFT_2449 0.45 -1.2
622,701 + B158DRAFT_2449 0.45 -0.2
622,709 - B158DRAFT_2449 0.46 -0.7
622,730 + B158DRAFT_2449 0.47 -0.3
622,730 + B158DRAFT_2449 0.47 +0.1
622,738 - B158DRAFT_2449 0.48 -0.6
622,738 - B158DRAFT_2449 0.48 -0.2
622,739 + B158DRAFT_2449 0.48 -0.6
622,808 + B158DRAFT_2449 0.54 -0.5
622,830 - B158DRAFT_2449 0.55 +0.2
622,845 + B158DRAFT_2449 0.57 -0.1
622,863 + B158DRAFT_2449 0.58 -0.9
622,863 + B158DRAFT_2449 0.58 -0.2
622,863 + B158DRAFT_2449 0.58 -0.3
622,863 + B158DRAFT_2449 0.58 +0.0
622,863 - B158DRAFT_2449 0.58 +0.2
622,890 - B158DRAFT_2449 0.60 -0.4
622,914 - B158DRAFT_2449 0.62 -0.3
622,933 + B158DRAFT_2449 0.64 -0.1
622,950 - B158DRAFT_2449 0.65 -0.8
622,981 - B158DRAFT_2449 0.68 +0.5
623,055 + B158DRAFT_2449 0.74 -0.3
623,063 - B158DRAFT_2449 0.74 -0.3
623,063 - B158DRAFT_2449 0.74 -0.9
623,109 - B158DRAFT_2449 0.78 -0.7
623,129 + B158DRAFT_2449 0.80 +0.1
623,178 - B158DRAFT_2449 0.84 -1.1
623,182 + B158DRAFT_2449 0.84 -1.0
623,189 + B158DRAFT_2449 0.85 +0.5
623,189 + B158DRAFT_2449 0.85 -0.5
623,197 - B158DRAFT_2449 0.85 -0.3
623,216 + B158DRAFT_2449 0.87 -0.3
623,221 + B158DRAFT_2449 0.87 +0.2
623,229 + B158DRAFT_2449 0.88 -0.6
623,229 - B158DRAFT_2449 0.88 +0.2
623,247 - B158DRAFT_2449 0.89 -0.5
623,265 + +0.9
623,265 + -0.1
623,294 + +0.3
623,294 + -0.0
623,294 + -0.3
623,302 - -1.5
623,382 + +0.2
623,390 + +0.1
623,390 - -0.0
623,390 - +0.0
623,406 - -0.1
623,475 + -0.1
623,475 + -0.6
623,483 - +0.9
623,487 + +1.0
623,661 - -0.3
623,842 - B158DRAFT_2450 0.25 +0.3
623,867 - B158DRAFT_2450 0.27 -2.8
623,915 + B158DRAFT_2450 0.31 -0.2
623,943 + B158DRAFT_2450 0.34 +0.3
623,951 - B158DRAFT_2450 0.34 +0.4
623,951 - B158DRAFT_2450 0.34 -0.1
623,951 - B158DRAFT_2450 0.34 +0.2
624,015 - B158DRAFT_2450 0.40 +0.1
624,053 + B158DRAFT_2450 0.43 -0.2
624,065 + B158DRAFT_2450 0.44 -1.0
624,065 + B158DRAFT_2450 0.44 -0.0
624,077 + B158DRAFT_2450 0.45 -0.2
624,077 + B158DRAFT_2450 0.45 -0.3
624,077 + B158DRAFT_2450 0.45 -0.9
624,085 - B158DRAFT_2450 0.46 -0.1
624,085 - B158DRAFT_2450 0.46 -0.2
624,087 + B158DRAFT_2450 0.46 -0.3
624,087 + B158DRAFT_2450 0.46 -0.2
624,120 - B158DRAFT_2450 0.49 -0.7
624,307 + B158DRAFT_2450 0.66 -0.3
624,350 + B158DRAFT_2450 0.70 +0.4
624,358 - B158DRAFT_2450 0.70 -0.3
624,360 + B158DRAFT_2450 0.71 +0.4

Or see this region's nucleotide sequence