Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4219

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPfGW456L13_4217 and PfGW456L13_4218 are separated by 131 nucleotidesPfGW456L13_4218 and PfGW456L13_4219 are separated by 126 nucleotidesPfGW456L13_4219 and PfGW456L13_4220 are separated by 110 nucleotides PfGW456L13_4217 - Sodium-dependent transporter, at 4,730,046 to 4,731,011 _4217 PfGW456L13_4218 - Quaternary ammonium compound-resistance protein SugE, at 4,731,143 to 4,731,457 _4218 PfGW456L13_4219 - 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51), at 4,731,584 to 4,733,458 _4219 PfGW456L13_4220 - C4-dicarboxylate transporter/malic acid transport protein, at 4,733,569 to 4,734,720 _4220 Position (kb) 4731 4732 4733 4734Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4730.767 kb on - strand, within PfGW456L13_4217at 4730.767 kb on - strand, within PfGW456L13_4217at 4730.949 kb on + strandat 4730.950 kb on - strandat 4731.005 kb on + strandat 4731.005 kb on + strandat 4731.006 kb on - strandat 4731.006 kb on - strandat 4731.006 kb on - strandat 4731.048 kb on - strandat 4731.060 kb on + strandat 4731.060 kb on + strandat 4731.060 kb on + strandat 4731.060 kb on + strandat 4731.060 kb on + strandat 4731.060 kb on + strandat 4731.060 kb on + strandat 4731.060 kb on + strandat 4731.060 kb on + strandat 4731.060 kb on + strandat 4731.060 kb on + strandat 4731.061 kb on - strandat 4731.061 kb on - strandat 4731.061 kb on - strandat 4731.061 kb on - strandat 4731.061 kb on - strandat 4731.061 kb on - strandat 4731.061 kb on - strandat 4731.061 kb on - strandat 4731.061 kb on - strandat 4731.061 kb on - strandat 4731.061 kb on - strandat 4731.062 kb on + strandat 4731.062 kb on + strandat 4731.062 kb on + strandat 4731.062 kb on + strandat 4731.062 kb on + strandat 4731.062 kb on + strandat 4731.062 kb on + strandat 4731.062 kb on + strandat 4731.062 kb on + strandat 4731.062 kb on + strandat 4731.062 kb on + strandat 4731.063 kb on - strandat 4731.063 kb on - strandat 4731.063 kb on - strandat 4731.063 kb on - strandat 4731.105 kb on + strandat 4731.106 kb on - strandat 4731.106 kb on - strandat 4731.206 kb on + strand, within PfGW456L13_4218at 4731.318 kb on - strand, within PfGW456L13_4218at 4731.585 kb on + strandat 4731.841 kb on + strand, within PfGW456L13_4219at 4731.842 kb on - strand, within PfGW456L13_4219at 4731.883 kb on - strand, within PfGW456L13_4219at 4731.912 kb on + strand, within PfGW456L13_4219at 4731.912 kb on + strand, within PfGW456L13_4219at 4731.912 kb on + strand, within PfGW456L13_4219at 4731.912 kb on + strand, within PfGW456L13_4219at 4731.912 kb on + strand, within PfGW456L13_4219at 4731.912 kb on + strand, within PfGW456L13_4219at 4731.912 kb on + strand, within PfGW456L13_4219at 4731.912 kb on + strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strandat 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.913 kb on - strand, within PfGW456L13_4219at 4731.914 kb on + strand, within PfGW456L13_4219at 4731.914 kb on + strand, within PfGW456L13_4219at 4731.914 kb on + strand, within PfGW456L13_4219at 4731.914 kb on + strand, within PfGW456L13_4219at 4731.914 kb on + strand, within PfGW456L13_4219at 4731.914 kb on + strand, within PfGW456L13_4219at 4731.914 kb on + strand, within PfGW456L13_4219at 4731.914 kb on + strand, within PfGW456L13_4219at 4731.914 kb on + strand, within PfGW456L13_4219at 4731.914 kb on + strand, within PfGW456L13_4219at 4731.915 kb on - strand, within PfGW456L13_4219at 4731.915 kb on - strand, within PfGW456L13_4219at 4731.915 kb on - strand, within PfGW456L13_4219at 4731.915 kb on - strand, within PfGW456L13_4219at 4731.915 kb on - strand, within PfGW456L13_4219at 4731.915 kb on - strand, within PfGW456L13_4219at 4731.993 kb on + strand, within PfGW456L13_4219at 4731.993 kb on + strand, within PfGW456L13_4219at 4731.993 kb on + strand, within PfGW456L13_4219at 4731.993 kb on + strand, within PfGW456L13_4219at 4731.994 kb on - strand, within PfGW456L13_4219at 4731.994 kb on - strand, within PfGW456L13_4219at 4732.002 kb on + strand, within PfGW456L13_4219at 4732.002 kb on + strand, within PfGW456L13_4219at 4732.002 kb on + strand, within PfGW456L13_4219at 4732.002 kb on + strand, within PfGW456L13_4219at 4732.002 kb on + strand, within PfGW456L13_4219at 4732.002 kb on + strand, within PfGW456L13_4219at 4732.002 kb on + strand, within PfGW456L13_4219at 4732.003 kb on - strand, within PfGW456L13_4219at 4732.003 kb on - strand, within PfGW456L13_4219at 4732.003 kb on - strand, within PfGW456L13_4219at 4732.003 kb on - strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.005 kb on + strand, within PfGW456L13_4219at 4732.006 kb on - strand, within PfGW456L13_4219at 4732.006 kb on - strand, within PfGW456L13_4219at 4732.006 kb on - strand, within PfGW456L13_4219at 4732.006 kb on - strand, within PfGW456L13_4219at 4732.006 kb on - strand, within PfGW456L13_4219at 4732.006 kb on - strand, within PfGW456L13_4219at 4732.137 kb on + strand, within PfGW456L13_4219at 4732.137 kb on + strand, within PfGW456L13_4219at 4732.204 kb on - strand, within PfGW456L13_4219at 4732.204 kb on - strand, within PfGW456L13_4219at 4732.204 kb on - strand, within PfGW456L13_4219at 4732.204 kb on - strand, within PfGW456L13_4219at 4732.204 kb on - strand, within PfGW456L13_4219at 4732.369 kb on + strand, within PfGW456L13_4219at 4732.369 kb on + strand, within PfGW456L13_4219at 4732.389 kb on + strand, within PfGW456L13_4219at 4732.389 kb on + strand, within PfGW456L13_4219at 4732.390 kb on - strand, within PfGW456L13_4219at 4732.390 kb on - strand, within PfGW456L13_4219at 4732.404 kb on + strand, within PfGW456L13_4219at 4732.405 kb on - strand, within PfGW456L13_4219at 4732.405 kb on - strand, within PfGW456L13_4219at 4732.405 kb on - strand, within PfGW456L13_4219at 4732.405 kb on - strand, within PfGW456L13_4219at 4732.701 kb on + strand, within PfGW456L13_4219at 4732.701 kb on + strand, within PfGW456L13_4219at 4732.701 kb on + strand, within PfGW456L13_4219at 4732.722 kb on + strand, within PfGW456L13_4219at 4732.722 kb on + strand, within PfGW456L13_4219at 4732.723 kb on - strand, within PfGW456L13_4219at 4732.942 kb on - strand, within PfGW456L13_4219at 4732.960 kb on + strand, within PfGW456L13_4219at 4733.030 kb on + strand, within PfGW456L13_4219at 4733.070 kb on + strand, within PfGW456L13_4219at 4733.496 kb on - strandat 4733.511 kb on + strandat 4733.511 kb on + strandat 4733.516 kb on + strandat 4733.516 kb on + strandat 4733.516 kb on + strandat 4733.517 kb on - strandat 4733.517 kb on - strandat 4733.517 kb on - strandat 4733.517 kb on - strandat 4733.552 kb on + strandat 4733.552 kb on + strandat 4733.553 kb on - strandat 4733.553 kb on - strandat 4733.553 kb on - strandat 4733.553 kb on - strandat 4733.553 kb on - strandat 4733.556 kb on + strandat 4733.557 kb on - strandat 4733.557 kb on - strandat 4733.557 kb on - strandat 4733.557 kb on - strandat 4733.571 kb on - strandat 4733.571 kb on - strandat 4733.571 kb on - strandat 4733.718 kb on + strand, within PfGW456L13_4220at 4733.718 kb on + strand, within PfGW456L13_4220at 4733.718 kb on + strand, within PfGW456L13_4220at 4733.747 kb on + strand, within PfGW456L13_4220at 4733.747 kb on + strand, within PfGW456L13_4220at 4733.748 kb on - strand, within PfGW456L13_4220at 4733.748 kb on - strand, within PfGW456L13_4220at 4733.748 kb on - strand, within PfGW456L13_4220at 4733.959 kb on + strand, within PfGW456L13_4220at 4733.960 kb on - strand, within PfGW456L13_4220at 4733.960 kb on - strand, within PfGW456L13_4220at 4734.040 kb on - strand, within PfGW456L13_4220at 4734.113 kb on + strand, within PfGW456L13_4220at 4734.113 kb on + strand, within PfGW456L13_4220at 4734.113 kb on + strand, within PfGW456L13_4220at 4734.113 kb on + strand, within PfGW456L13_4220at 4734.114 kb on - strand, within PfGW456L13_4220at 4734.114 kb on - strand, within PfGW456L13_4220at 4734.269 kb on + strand, within PfGW456L13_4220at 4734.269 kb on + strand, within PfGW456L13_4220at 4734.270 kb on - strand, within PfGW456L13_4220at 4734.270 kb on - strand, within PfGW456L13_4220at 4734.270 kb on - strand, within PfGW456L13_4220at 4734.270 kb on - strand, within PfGW456L13_4220at 4734.270 kb on - strand, within PfGW456L13_4220at 4734.270 kb on - strand, within PfGW456L13_4220at 4734.270 kb on - strand, within PfGW456L13_4220

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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4,730,767 - PfGW456L13_4217 0.75 -1.6
4,730,767 - PfGW456L13_4217 0.75 +0.6
4,730,949 + -0.1
4,730,950 - -0.2
4,731,005 + -0.7
4,731,005 + +0.7
4,731,006 - -0.0
4,731,006 - +0.3
4,731,006 - +0.7
4,731,048 - -1.2
4,731,060 + -0.6
4,731,060 + -0.5
4,731,060 + +1.0
4,731,060 + +0.2
4,731,060 + -0.2
4,731,060 + +0.9
4,731,060 + -2.4
4,731,060 + -0.5
4,731,060 + +0.2
4,731,060 + +0.7
4,731,060 + -0.3
4,731,061 - -0.7
4,731,061 - -0.4
4,731,061 - -0.7
4,731,061 - +0.2
4,731,061 - +0.7
4,731,061 - -0.9
4,731,061 - -0.1
4,731,061 - +0.0
4,731,061 - -1.0
4,731,061 - +0.3
4,731,061 - +0.9
4,731,062 + +0.2
4,731,062 + -0.6
4,731,062 + -0.2
4,731,062 + -0.5
4,731,062 + +0.9
4,731,062 + +0.4
4,731,062 + +1.1
4,731,062 + +0.4
4,731,062 + -1.2
4,731,062 + -0.4
4,731,062 + -0.2
4,731,063 - -0.1
4,731,063 - -1.3
4,731,063 - -1.6
4,731,063 - +0.3
4,731,105 + +0.2
4,731,106 - -0.0
4,731,106 - -0.2
4,731,206 + PfGW456L13_4218 0.20 -0.1
4,731,318 - PfGW456L13_4218 0.56 -0.1
4,731,585 + +0.2
4,731,841 + PfGW456L13_4219 0.14 +0.7
4,731,842 - PfGW456L13_4219 0.14 -0.7
4,731,883 - PfGW456L13_4219 0.16 +1.1
4,731,912 + PfGW456L13_4219 0.17 -0.0
4,731,912 + PfGW456L13_4219 0.17 -1.0
4,731,912 + PfGW456L13_4219 0.17 -1.2
4,731,912 + PfGW456L13_4219 0.17 -1.4
4,731,912 + PfGW456L13_4219 0.17 +0.4
4,731,912 + PfGW456L13_4219 0.17 -0.1
4,731,912 + PfGW456L13_4219 0.17 -2.5
4,731,912 + PfGW456L13_4219 0.17 +0.4
4,731,913 - PfGW456L13_4219 0.18 -0.2
4,731,913 - PfGW456L13_4219 0.18 +1.3
4,731,913 - PfGW456L13_4219 0.18 -0.5
4,731,913 - PfGW456L13_4219 0.18 +0.4
4,731,913 - PfGW456L13_4219 0.18 -1.8
4,731,913 - PfGW456L13_4219 0.18 +0.2
4,731,913 - PfGW456L13_4219 0.18 -0.9
4,731,913 - -0.1
4,731,913 - PfGW456L13_4219 0.18 +0.8
4,731,913 - PfGW456L13_4219 0.18 -0.2
4,731,913 - PfGW456L13_4219 0.18 -1.4
4,731,913 - PfGW456L13_4219 0.18 +0.8
4,731,913 - PfGW456L13_4219 0.18 +0.3
4,731,913 - PfGW456L13_4219 0.18 +0.5
4,731,913 - PfGW456L13_4219 0.18 -0.3
4,731,914 + PfGW456L13_4219 0.18 -0.3
4,731,914 + PfGW456L13_4219 0.18 +0.3
4,731,914 + PfGW456L13_4219 0.18 -0.6
4,731,914 + PfGW456L13_4219 0.18 +0.2
4,731,914 + PfGW456L13_4219 0.18 +0.3
4,731,914 + PfGW456L13_4219 0.18 -1.6
4,731,914 + PfGW456L13_4219 0.18 +0.8
4,731,914 + PfGW456L13_4219 0.18 +1.3
4,731,914 + PfGW456L13_4219 0.18 +0.1
4,731,914 + PfGW456L13_4219 0.18 +0.4
4,731,915 - PfGW456L13_4219 0.18 -0.1
4,731,915 - PfGW456L13_4219 0.18 +0.9
4,731,915 - PfGW456L13_4219 0.18 +0.4
4,731,915 - PfGW456L13_4219 0.18 -0.4
4,731,915 - PfGW456L13_4219 0.18 +1.1
4,731,915 - PfGW456L13_4219 0.18 +1.1
4,731,993 + PfGW456L13_4219 0.22 -0.1
4,731,993 + PfGW456L13_4219 0.22 -0.5
4,731,993 + PfGW456L13_4219 0.22 +0.2
4,731,993 + PfGW456L13_4219 0.22 -0.7
4,731,994 - PfGW456L13_4219 0.22 -0.5
4,731,994 - PfGW456L13_4219 0.22 +1.2
4,732,002 + PfGW456L13_4219 0.22 +0.9
4,732,002 + PfGW456L13_4219 0.22 -0.4
4,732,002 + PfGW456L13_4219 0.22 -0.6
4,732,002 + PfGW456L13_4219 0.22 +0.0
4,732,002 + PfGW456L13_4219 0.22 +0.9
4,732,002 + PfGW456L13_4219 0.22 -0.3
4,732,002 + PfGW456L13_4219 0.22 -0.6
4,732,003 - PfGW456L13_4219 0.22 +1.1
4,732,003 - PfGW456L13_4219 0.22 +0.3
4,732,003 - PfGW456L13_4219 0.22 +0.8
4,732,003 - PfGW456L13_4219 0.22 +0.7
4,732,005 + PfGW456L13_4219 0.22 -0.2
4,732,005 + PfGW456L13_4219 0.22 -0.3
4,732,005 + PfGW456L13_4219 0.22 -0.1
4,732,005 + PfGW456L13_4219 0.22 -0.6
4,732,005 + PfGW456L13_4219 0.22 -0.8
4,732,005 + PfGW456L13_4219 0.22 -0.8
4,732,005 + PfGW456L13_4219 0.22 +0.3
4,732,005 + PfGW456L13_4219 0.22 -0.3
4,732,005 + PfGW456L13_4219 0.22 +0.3
4,732,005 + PfGW456L13_4219 0.22 -0.6
4,732,005 + PfGW456L13_4219 0.22 +0.1
4,732,005 + PfGW456L13_4219 0.22 +0.1
4,732,005 + PfGW456L13_4219 0.22 -0.8
4,732,006 - PfGW456L13_4219 0.23 +0.7
4,732,006 - PfGW456L13_4219 0.23 -0.3
4,732,006 - PfGW456L13_4219 0.23 +0.2
4,732,006 - PfGW456L13_4219 0.23 -0.5
4,732,006 - PfGW456L13_4219 0.23 +1.0
4,732,006 - PfGW456L13_4219 0.23 -0.7
4,732,137 + PfGW456L13_4219 0.29 -3.0
4,732,137 + PfGW456L13_4219 0.29 +1.0
4,732,204 - PfGW456L13_4219 0.33 +0.1
4,732,204 - PfGW456L13_4219 0.33 +0.0
4,732,204 - PfGW456L13_4219 0.33 -0.2
4,732,204 - PfGW456L13_4219 0.33 +0.6
4,732,204 - PfGW456L13_4219 0.33 -0.9
4,732,369 + PfGW456L13_4219 0.42 +0.0
4,732,369 + PfGW456L13_4219 0.42 +0.2
4,732,389 + PfGW456L13_4219 0.43 -0.3
4,732,389 + PfGW456L13_4219 0.43 +0.1
4,732,390 - PfGW456L13_4219 0.43 +0.6
4,732,390 - PfGW456L13_4219 0.43 +1.8
4,732,404 + PfGW456L13_4219 0.44 +0.2
4,732,405 - PfGW456L13_4219 0.44 +0.6
4,732,405 - PfGW456L13_4219 0.44 -0.3
4,732,405 - PfGW456L13_4219 0.44 -1.5
4,732,405 - PfGW456L13_4219 0.44 +0.2
4,732,701 + PfGW456L13_4219 0.60 +0.4
4,732,701 + PfGW456L13_4219 0.60 +0.6
4,732,701 + PfGW456L13_4219 0.60 -0.2
4,732,722 + PfGW456L13_4219 0.61 -0.5
4,732,722 + PfGW456L13_4219 0.61 -0.7
4,732,723 - PfGW456L13_4219 0.61 -0.2
4,732,942 - PfGW456L13_4219 0.72 -0.3
4,732,960 + PfGW456L13_4219 0.73 +0.6
4,733,030 + PfGW456L13_4219 0.77 -0.7
4,733,070 + PfGW456L13_4219 0.79 +1.3
4,733,496 - +0.7
4,733,511 + +0.6
4,733,511 + -1.2
4,733,516 + -0.6
4,733,516 + -1.5
4,733,516 + +0.2
4,733,517 - -2.2
4,733,517 - +0.3
4,733,517 - +0.8
4,733,517 - -0.3
4,733,552 + -0.1
4,733,552 + +0.8
4,733,553 - +0.7
4,733,553 - +0.8
4,733,553 - -0.8
4,733,553 - +0.7
4,733,553 - +0.1
4,733,556 + -0.2
4,733,557 - +0.7
4,733,557 - +0.5
4,733,557 - -0.7
4,733,557 - +0.4
4,733,571 - +0.2
4,733,571 - +0.5
4,733,571 - +0.1
4,733,718 + PfGW456L13_4220 0.13 +0.2
4,733,718 + PfGW456L13_4220 0.13 +0.7
4,733,718 + PfGW456L13_4220 0.13 -0.3
4,733,747 + PfGW456L13_4220 0.15 -0.4
4,733,747 + PfGW456L13_4220 0.15 +0.2
4,733,748 - PfGW456L13_4220 0.16 +0.2
4,733,748 - PfGW456L13_4220 0.16 -2.4
4,733,748 - PfGW456L13_4220 0.16 -0.6
4,733,959 + PfGW456L13_4220 0.34 +0.4
4,733,960 - PfGW456L13_4220 0.34 -0.1
4,733,960 - PfGW456L13_4220 0.34 -0.4
4,734,040 - PfGW456L13_4220 0.41 -0.2
4,734,113 + PfGW456L13_4220 0.47 +0.1
4,734,113 + PfGW456L13_4220 0.47 -0.6
4,734,113 + PfGW456L13_4220 0.47 -0.1
4,734,113 + PfGW456L13_4220 0.47 +0.1
4,734,114 - PfGW456L13_4220 0.47 +0.6
4,734,114 - PfGW456L13_4220 0.47 -0.4
4,734,269 + PfGW456L13_4220 0.61 +0.5
4,734,269 + PfGW456L13_4220 0.61 -1.3
4,734,270 - PfGW456L13_4220 0.61 -0.1
4,734,270 - PfGW456L13_4220 0.61 +0.6
4,734,270 - PfGW456L13_4220 0.61 +0.1
4,734,270 - PfGW456L13_4220 0.61 +0.4
4,734,270 - PfGW456L13_4220 0.61 -0.1
4,734,270 - PfGW456L13_4220 0.61 -0.2
4,734,270 - PfGW456L13_4220 0.61 +0.8

Or see this region's nucleotide sequence