Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4152 and PfGW456L13_4153 are separated by 365 nucleotides PfGW456L13_4153 and PfGW456L13_4154 are separated by 210 nucleotides PfGW456L13_4154 and PfGW456L13_4155 are separated by 216 nucleotides
PfGW456L13_4152 - Protein containing domains DUF404, DUF407, at 4,668,779 to 4,670,188
_4152
PfGW456L13_4153 - Superfamily II DNA/RNA helicases, SNF2 family, at 4,670,554 to 4,670,898
_4153
PfGW456L13_4154 - FIG00957412: hypothetical protein, at 4,671,109 to 4,671,342
_4154
PfGW456L13_4155 - Spermidine synthase (EC 2.5.1.16), at 4,671,559 to 4,672,434
_4155
Position (kb)
4671
4672 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4670.160 kb on + strand at 4670.160 kb on + strand at 4670.160 kb on + strand at 4670.160 kb on + strand at 4670.160 kb on + strand at 4670.161 kb on - strand at 4670.161 kb on - strand at 4670.161 kb on - strand at 4670.161 kb on - strand at 4670.161 kb on - strand at 4670.161 kb on - strand at 4670.175 kb on + strand at 4670.175 kb on + strand at 4670.175 kb on + strand at 4670.175 kb on + strand at 4670.176 kb on - strand at 4670.176 kb on - strand at 4670.176 kb on - strand at 4670.371 kb on + strand at 4670.372 kb on - strand at 4670.549 kb on + strand at 4670.550 kb on - strand at 4670.550 kb on - strand at 4670.550 kb on - strand at 4670.550 kb on - strand at 4670.550 kb on - strand at 4670.550 kb on - strand at 4670.572 kb on + strand at 4670.573 kb on - strand at 4670.573 kb on - strand at 4670.573 kb on - strand at 4670.663 kb on + strand, within PfGW456L13_4153 at 4670.664 kb on - strand, within PfGW456L13_4153 at 4670.664 kb on - strand, within PfGW456L13_4153 at 4670.672 kb on + strand, within PfGW456L13_4153 at 4670.672 kb on + strand, within PfGW456L13_4153 at 4670.672 kb on + strand, within PfGW456L13_4153 at 4670.672 kb on + strand, within PfGW456L13_4153 at 4670.672 kb on + strand, within PfGW456L13_4153 at 4670.672 kb on + strand, within PfGW456L13_4153 at 4670.672 kb on + strand, within PfGW456L13_4153 at 4670.672 kb on + strand, within PfGW456L13_4153 at 4670.672 kb on + strand, within PfGW456L13_4153 at 4670.672 kb on + strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.673 kb on - strand, within PfGW456L13_4153 at 4670.801 kb on + strand, within PfGW456L13_4153 at 4670.802 kb on - strand, within PfGW456L13_4153 at 4670.802 kb on - strand, within PfGW456L13_4153 at 4670.886 kb on - strand at 4670.925 kb on - strand at 4671.022 kb on + strand at 4671.055 kb on - strand at 4671.316 kb on + strand, within PfGW456L13_4154 at 4671.316 kb on + strand, within PfGW456L13_4154 at 4671.316 kb on + strand, within PfGW456L13_4154 at 4671.316 kb on + strand, within PfGW456L13_4154 at 4671.317 kb on - strand, within PfGW456L13_4154 at 4671.317 kb on - strand, within PfGW456L13_4154 at 4671.317 kb on - strand, within PfGW456L13_4154 at 4671.317 kb on - strand, within PfGW456L13_4154 at 4671.358 kb on - strand at 4671.358 kb on - strand at 4671.376 kb on + strand at 4671.376 kb on + strand at 4671.376 kb on + strand at 4671.376 kb on + strand at 4671.377 kb on - strand at 4671.377 kb on - strand at 4671.382 kb on + strand at 4671.382 kb on + strand at 4671.382 kb on + strand at 4671.383 kb on - strand at 4671.383 kb on - strand at 4671.397 kb on - strand at 4671.443 kb on + strand at 4671.443 kb on + strand at 4671.484 kb on + strand at 4671.537 kb on + strand at 4671.567 kb on + strand at 4671.568 kb on - strand at 4671.568 kb on - strand at 4671.596 kb on + strand at 4671.596 kb on + strand at 4671.596 kb on + strand at 4671.596 kb on + strand at 4671.596 kb on + strand at 4671.597 kb on - strand at 4671.597 kb on - strand at 4671.597 kb on - strand at 4671.597 kb on - strand at 4671.597 kb on - strand at 4671.597 kb on - strand at 4671.638 kb on + strand at 4671.638 kb on + strand at 4671.638 kb on + strand at 4671.638 kb on + strand at 4671.638 kb on + strand at 4671.638 kb on + strand at 4671.638 kb on + strand at 4671.638 kb on + strand at 4671.638 kb on + strand at 4671.638 kb on + strand at 4671.639 kb on - strand at 4671.639 kb on - strand at 4671.639 kb on - strand at 4671.639 kb on - strand at 4671.639 kb on - strand at 4671.639 kb on - strand at 4671.639 kb on - strand at 4671.639 kb on - strand at 4671.752 kb on + strand, within PfGW456L13_4155 at 4671.752 kb on + strand, within PfGW456L13_4155 at 4671.753 kb on - strand, within PfGW456L13_4155 at 4671.753 kb on - strand, within PfGW456L13_4155 at 4671.773 kb on + strand, within PfGW456L13_4155 at 4671.773 kb on + strand, within PfGW456L13_4155 at 4671.773 kb on + strand, within PfGW456L13_4155 at 4671.773 kb on + strand, within PfGW456L13_4155 at 4671.905 kb on + strand, within PfGW456L13_4155 at 4671.905 kb on + strand at 4671.906 kb on - strand, within PfGW456L13_4155 at 4671.906 kb on - strand, within PfGW456L13_4155 at 4672.242 kb on - strand, within PfGW456L13_4155 at 4672.242 kb on - strand, within PfGW456L13_4155
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 4,670,160 + -0.1 4,670,160 + -0.4 4,670,160 + -0.2 4,670,160 + -0.2 4,670,160 + -0.2 4,670,161 - -0.5 4,670,161 - -0.2 4,670,161 - +1.3 4,670,161 - -0.3 4,670,161 - -0.1 4,670,161 - -0.3 4,670,175 + -0.3 4,670,175 + -0.2 4,670,175 + +0.3 4,670,175 + +0.3 4,670,176 - +1.9 4,670,176 - +0.5 4,670,176 - -0.4 4,670,371 + +0.4 4,670,372 - -0.0 4,670,549 + -0.5 4,670,550 - -0.7 4,670,550 - -1.5 4,670,550 - -0.1 4,670,550 - -0.2 4,670,550 - +0.8 4,670,550 - +1.4 4,670,572 + -0.2 4,670,573 - +1.2 4,670,573 - +1.5 4,670,573 - +1.0 4,670,663 + PfGW456L13_4153 0.32 -0.7 4,670,664 - PfGW456L13_4153 0.32 -0.6 4,670,664 - PfGW456L13_4153 0.32 -1.9 4,670,672 + PfGW456L13_4153 0.34 +1.8 4,670,672 + PfGW456L13_4153 0.34 -1.8 4,670,672 + PfGW456L13_4153 0.34 -1.0 4,670,672 + PfGW456L13_4153 0.34 +0.2 4,670,672 + PfGW456L13_4153 0.34 +0.4 4,670,672 + PfGW456L13_4153 0.34 -1.0 4,670,672 + PfGW456L13_4153 0.34 -1.5 4,670,672 + PfGW456L13_4153 0.34 -0.1 4,670,672 + PfGW456L13_4153 0.34 +1.7 4,670,672 + PfGW456L13_4153 0.34 -0.1 4,670,673 - PfGW456L13_4153 0.34 -0.1 4,670,673 - PfGW456L13_4153 0.34 +0.3 4,670,673 - PfGW456L13_4153 0.34 -0.6 4,670,673 - PfGW456L13_4153 0.34 -0.9 4,670,673 - PfGW456L13_4153 0.34 -0.5 4,670,673 - PfGW456L13_4153 0.34 -2.5 4,670,673 - PfGW456L13_4153 0.34 +1.4 4,670,673 - PfGW456L13_4153 0.34 +1.1 4,670,673 - PfGW456L13_4153 0.34 -0.7 4,670,673 - PfGW456L13_4153 0.34 -3.5 4,670,673 - PfGW456L13_4153 0.34 -1.1 4,670,673 - PfGW456L13_4153 0.34 +0.2 4,670,673 - PfGW456L13_4153 0.34 +0.7 4,670,673 - PfGW456L13_4153 0.34 +0.7 4,670,673 - PfGW456L13_4153 0.34 -1.3 4,670,801 + PfGW456L13_4153 0.72 +0.0 4,670,802 - PfGW456L13_4153 0.72 +0.5 4,670,802 - PfGW456L13_4153 0.72 +1.3 4,670,886 - -0.1 4,670,925 - +0.0 4,671,022 + -0.9 4,671,055 - -2.2 4,671,316 + PfGW456L13_4154 0.88 +1.9 4,671,316 + PfGW456L13_4154 0.88 -0.6 4,671,316 + PfGW456L13_4154 0.88 +0.0 4,671,316 + PfGW456L13_4154 0.88 +0.4 4,671,317 - PfGW456L13_4154 0.89 -0.1 4,671,317 - PfGW456L13_4154 0.89 +0.7 4,671,317 - PfGW456L13_4154 0.89 +1.7 4,671,317 - PfGW456L13_4154 0.89 -0.4 4,671,358 - -0.3 4,671,358 - -0.1 4,671,376 + -0.4 4,671,376 + -0.1 4,671,376 + +0.0 4,671,376 + +0.3 4,671,377 - -1.1 4,671,377 - +0.5 4,671,382 + +0.6 4,671,382 + -0.1 4,671,382 + -0.8 4,671,383 - +2.0 4,671,383 - -2.2 4,671,397 - +0.5 4,671,443 + +1.4 4,671,443 + +0.5 4,671,484 + +0.2 4,671,537 + -1.3 4,671,567 + +0.5 4,671,568 - -1.0 4,671,568 - -1.5 4,671,596 + +0.5 4,671,596 + -0.3 4,671,596 + +0.5 4,671,596 + -0.7 4,671,596 + -1.2 4,671,597 - +1.0 4,671,597 - -0.4 4,671,597 - -0.4 4,671,597 - -0.3 4,671,597 - +1.0 4,671,597 - -0.9 4,671,638 + -2.2 4,671,638 + -0.0 4,671,638 + +1.0 4,671,638 + -0.3 4,671,638 + -1.1 4,671,638 + -0.1 4,671,638 + -1.0 4,671,638 + -0.5 4,671,638 + +2.3 4,671,638 + +0.5 4,671,639 - -0.6 4,671,639 - +0.8 4,671,639 - +0.6 4,671,639 - -0.4 4,671,639 - +1.5 4,671,639 - -0.4 4,671,639 - -0.2 4,671,639 - +0.4 4,671,752 + PfGW456L13_4155 0.22 -1.0 4,671,752 + PfGW456L13_4155 0.22 -0.6 4,671,753 - PfGW456L13_4155 0.22 +0.6 4,671,753 - PfGW456L13_4155 0.22 -0.7 4,671,773 + PfGW456L13_4155 0.24 -0.1 4,671,773 + PfGW456L13_4155 0.24 -1.2 4,671,773 + PfGW456L13_4155 0.24 +0.5 4,671,773 + PfGW456L13_4155 0.24 -0.1 4,671,905 + PfGW456L13_4155 0.39 +1.2 4,671,905 + +0.7 4,671,906 - PfGW456L13_4155 0.40 +0.1 4,671,906 - PfGW456L13_4155 0.40 -0.1 4,672,242 - PfGW456L13_4155 0.78 -0.5 4,672,242 - PfGW456L13_4155 0.78 -0.9
Or see this region's nucleotide sequence