Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3001

Experiment: L-Phenylalanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine (N)
3,341,735	+		PfGW456L13_2999	0.84	+1.0
3,341,735	+		PfGW456L13_2999	0.84	-0.5
3,341,735	+		PfGW456L13_2999	0.84	-1.5
3,341,736	-		PfGW456L13_2999	0.84	+0.7
3,341,736	-		PfGW456L13_2999	0.84	-1.4
3,341,747	+		PfGW456L13_2999	0.85	-0.3
3,341,779	+		PfGW456L13_2999	0.86	+1.7
3,341,779	+		PfGW456L13_2999	0.86	+0.4
3,341,779	+		PfGW456L13_2999	0.86	+1.1
3,341,780	-		PfGW456L13_2999	0.86	-1.9
3,341,780	-		PfGW456L13_2999	0.86	+0.1
3,341,911	+				+0.3
3,341,911	+				+0.6
3,341,911	+				-0.1
3,341,911	+				-0.0
3,341,911	+				-2.8
3,341,912	-				-0.5
3,341,912	-				+0.6
3,341,912	-				+1.1
3,341,912	-				-0.0
3,341,944	+				-0.1
3,341,944	+				-0.4
3,341,945	-				-3.2
3,341,945	-				-0.2
3,342,061	-				+0.5
3,342,102	+				+0.3
3,342,102	+				+0.2
3,342,102	+				+0.9
3,342,102	+				-0.4
3,342,103	-				+0.7
3,342,110	+				+0.7
3,342,110	+				-0.1
3,342,356	+		PfGW456L13_3000	0.78	-0.1
3,342,356	+		PfGW456L13_3000	0.78	-1.4
3,342,381	+				+0.7
3,342,381	+				-0.6
3,342,381	+				+0.5
3,342,382	-				+1.5
3,342,385	+				-0.4
3,342,385	+				-2.4
3,342,385	+				-2.4
3,342,385	+				-0.0
3,342,385	+				-1.1
3,342,385	+				-0.7
3,342,385	+				+0.8
3,342,385	+				-0.6
3,342,385	+				-0.3
3,342,385	+				+0.1
3,342,385	+				+0.2
3,342,385	+				-0.2
3,342,385	+				-0.0
3,342,385	+				-1.1
3,342,385	+				+0.2
3,342,386	-				-3.6
3,342,386	-				+0.6
3,342,386	-				+0.3
3,342,386	-				-1.2
3,342,386	-				-0.2
3,342,386	-				-0.8
3,342,386	-				-0.5
3,342,428	+				+0.8
3,342,428	+				-2.4
3,342,428	+				-2.7
3,342,429	-				+0.2
3,342,429	-				-2.0
3,342,432	+				-0.5
3,342,432	+				-0.8
3,342,433	-				+0.2
3,342,433	-				-0.2
3,342,433	-				-0.2
3,342,457	+				+1.9
3,342,457	+				-1.8
3,342,457	+				-1.8
3,342,458	-				-0.0
3,342,458	-				-0.5
3,342,458	-				-0.8
3,342,458	-				+0.1
3,342,458	-				-0.0
3,342,458	-				+0.5
3,342,548	+				+0.7
3,342,625	-				-0.7
3,342,643	+				-0.6
3,342,644	-				-2.9
3,342,644	-				-0.7
3,342,644	-				-0.8
3,342,650	+				-1.4
3,342,650	+				-1.0
3,342,650	+				-0.2
3,342,651	-				-0.2
3,342,651	-				+0.2
3,342,651	-				+0.5
3,342,651	-				+0.1
3,342,654	-				-2.0
3,342,710	+				+0.2
3,342,754	-				-0.6
3,342,789	-		PfGW456L13_3001	0.12	-0.0
3,342,960	+		PfGW456L13_3001	0.30	-0.0
3,342,960	+		PfGW456L13_3001	0.30	-2.4
3,342,960	+		PfGW456L13_3001	0.30	+1.2
3,342,960	+		PfGW456L13_3001	0.30	-0.1
3,342,960	+		PfGW456L13_3001	0.30	-1.5
3,342,960	+		PfGW456L13_3001	0.30	+1.2
3,342,960	+		PfGW456L13_3001	0.30	-0.8
3,342,960	+		PfGW456L13_3001	0.30	-1.3
3,342,961	-		PfGW456L13_3001	0.30	-0.1
3,342,961	-		PfGW456L13_3001	0.30	-0.2
3,342,961	-		PfGW456L13_3001	0.30	+0.4
3,342,961	-		PfGW456L13_3001	0.30	+0.3
3,342,961	-		PfGW456L13_3001	0.30	+0.9
3,342,961	-		PfGW456L13_3001	0.30	-0.8
3,342,962	+		PfGW456L13_3001	0.30	+0.1
3,343,011	+		PfGW456L13_3001	0.35	+0.3
3,343,012	-		PfGW456L13_3001	0.35	-0.1
3,343,012	-		PfGW456L13_3001	0.35	-0.4
3,343,012	-				+1.2
3,343,025	+		PfGW456L13_3001	0.36	-0.0
3,343,194	+		PfGW456L13_3001	0.54	-0.1
3,343,194	+		PfGW456L13_3001	0.54	-0.3
3,343,194	+		PfGW456L13_3001	0.54	+0.2
3,343,194	+		PfGW456L13_3001	0.54	+1.0
3,343,195	-		PfGW456L13_3001	0.54	+1.6
3,343,758	-				+0.5
3,343,758	-				-0.8
3,343,758	-				+0.3
3,343,949	+		PfGW456L13_3002	0.20	+0.3
3,343,949	+		PfGW456L13_3002	0.20	+0.2
3,343,949	+		PfGW456L13_3002	0.20	-0.3
3,343,950	-		PfGW456L13_3002	0.20	+0.9
3,343,950	-		PfGW456L13_3002	0.20	-0.4
3,343,950	-		PfGW456L13_3002	0.20	-0.8
3,343,982	+		PfGW456L13_3002	0.22	-0.3
3,343,982	+		PfGW456L13_3002	0.22	+0.9
3,343,982	+		PfGW456L13_3002	0.22	+0.3
3,343,982	+		PfGW456L13_3002	0.22	-1.3
3,343,982	+		PfGW456L13_3002	0.22	-1.4
3,343,983	-		PfGW456L13_3002	0.22	+0.7
3,344,036	+		PfGW456L13_3002	0.26	+0.9
3,344,037	-		PfGW456L13_3002	0.26	+0.5
3,344,037	-		PfGW456L13_3002	0.26	+0.6
3,344,037	-		PfGW456L13_3002	0.26	-0.4
3,344,037	-		PfGW456L13_3002	0.26	+0.2
3,344,037	-		PfGW456L13_3002	0.26	-0.5
3,344,164	+		PfGW456L13_3002	0.34	+0.7
3,344,164	+		PfGW456L13_3002	0.34	+0.4
3,344,164	+		PfGW456L13_3002	0.34	+0.3
3,344,164	+		PfGW456L13_3002	0.34	+0.3
3,344,164	+		PfGW456L13_3002	0.34	+1.2
3,344,165	-		PfGW456L13_3002	0.34	+0.2
3,344,165	-		PfGW456L13_3002	0.34	-1.7
3,344,165	-		PfGW456L13_3002	0.34	-0.1
3,344,165	-		PfGW456L13_3002	0.34	-0.1
3,344,220	-		PfGW456L13_3002	0.38	+0.9
3,344,234	+		PfGW456L13_3002	0.39	-0.4
3,344,234	+		PfGW456L13_3002	0.39	+1.2
3,344,235	-		PfGW456L13_3002	0.39	+0.1
3,344,235	-		PfGW456L13_3002	0.39	+0.3
3,344,253	+		PfGW456L13_3002	0.40	+0.1
3,344,254	-		PfGW456L13_3002	0.40	-2.4
3,344,315	+		PfGW456L13_3002	0.44	+0.3
3,344,315	+		PfGW456L13_3002	0.44	+0.0
3,344,316	-		PfGW456L13_3002	0.44	+0.9
3,344,316	-		PfGW456L13_3002	0.44	+1.6
3,344,378	+		PfGW456L13_3002	0.48	+0.8
3,344,378	+		PfGW456L13_3002	0.48	-0.6
3,344,564	+		PfGW456L13_3002	0.60	+0.8
3,344,565	-		PfGW456L13_3002	0.60	-3.4
3,344,565	-		PfGW456L13_3002	0.60	-0.0
3,344,565	-		PfGW456L13_3002	0.60	-1.8
3,344,648	+		PfGW456L13_3002	0.66	+2.2
3,344,648	+		PfGW456L13_3002	0.66	-0.2
3,344,648	+		PfGW456L13_3002	0.66	+1.0
3,344,648	+		PfGW456L13_3002	0.66	+0.1
3,344,648	+		PfGW456L13_3002	0.66	-0.4
3,344,648	+		PfGW456L13_3002	0.66	-0.7
3,344,648	+		PfGW456L13_3002	0.66	+1.2
3,344,649	-		PfGW456L13_3002	0.66	+0.2
3,344,649	-		PfGW456L13_3002	0.66	-1.2
3,344,649	-		PfGW456L13_3002	0.66	+0.3
3,344,649	-		PfGW456L13_3002	0.66	+0.2