Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_265 and PfGW456L13_266 are separated by 4 nucleotides PfGW456L13_266 and PfGW456L13_267 are separated by 8 nucleotides PfGW456L13_267 and PfGW456L13_268 are separated by 4 nucleotides
PfGW456L13_265 - General secretion pathway protein E, at 307,299 to 308,771
_265
PfGW456L13_266 - General secretion pathway protein D, at 308,776 to 310,695
_266
PfGW456L13_267 - hypothetical protein, at 310,704 to 311,246
_267
PfGW456L13_268 - Cytochrome B561, at 311,251 to 311,814
_268
Position (kb) 308
309
310
311 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 307.919 kb on - strand, within PfGW456L13_265 at 307.919 kb on - strand, within PfGW456L13_265 at 307.985 kb on - strand, within PfGW456L13_265 at 308.033 kb on + strand, within PfGW456L13_265 at 308.034 kb on - strand at 308.345 kb on + strand, within PfGW456L13_265 at 308.346 kb on - strand, within PfGW456L13_265 at 308.359 kb on + strand, within PfGW456L13_265 at 308.359 kb on + strand, within PfGW456L13_265 at 308.360 kb on - strand, within PfGW456L13_265 at 308.590 kb on + strand, within PfGW456L13_265 at 308.590 kb on + strand, within PfGW456L13_265 at 308.675 kb on + strand at 308.675 kb on + strand at 308.676 kb on - strand at 308.909 kb on + strand at 308.910 kb on - strand at 308.910 kb on - strand at 308.943 kb on + strand at 309.029 kb on + strand, within PfGW456L13_266 at 309.230 kb on - strand, within PfGW456L13_266 at 309.251 kb on + strand, within PfGW456L13_266 at 309.251 kb on + strand, within PfGW456L13_266 at 309.251 kb on + strand, within PfGW456L13_266 at 309.251 kb on + strand, within PfGW456L13_266 at 309.251 kb on + strand, within PfGW456L13_266 at 309.251 kb on + strand, within PfGW456L13_266 at 309.251 kb on + strand, within PfGW456L13_266 at 309.251 kb on + strand, within PfGW456L13_266 at 309.251 kb on + strand, within PfGW456L13_266 at 309.251 kb on + strand, within PfGW456L13_266 at 309.251 kb on + strand, within PfGW456L13_266 at 309.251 kb on + strand, within PfGW456L13_266 at 309.252 kb on - strand, within PfGW456L13_266 at 309.252 kb on - strand, within PfGW456L13_266 at 309.252 kb on - strand, within PfGW456L13_266 at 309.252 kb on - strand, within PfGW456L13_266 at 309.252 kb on - strand, within PfGW456L13_266 at 309.252 kb on - strand, within PfGW456L13_266 at 309.252 kb on - strand, within PfGW456L13_266 at 309.252 kb on - strand, within PfGW456L13_266 at 309.335 kb on + strand, within PfGW456L13_266 at 309.335 kb on + strand, within PfGW456L13_266 at 309.336 kb on - strand, within PfGW456L13_266 at 309.336 kb on - strand, within PfGW456L13_266 at 309.930 kb on + strand, within PfGW456L13_266 at 310.024 kb on + strand, within PfGW456L13_266 at 310.024 kb on + strand, within PfGW456L13_266 at 310.024 kb on + strand, within PfGW456L13_266 at 310.168 kb on - strand, within PfGW456L13_266 at 310.168 kb on - strand, within PfGW456L13_266 at 310.168 kb on - strand, within PfGW456L13_266 at 310.226 kb on + strand, within PfGW456L13_266 at 310.226 kb on + strand, within PfGW456L13_266 at 310.227 kb on - strand, within PfGW456L13_266 at 310.227 kb on - strand, within PfGW456L13_266 at 310.227 kb on - strand, within PfGW456L13_266 at 310.333 kb on + strand, within PfGW456L13_266 at 310.410 kb on + strand, within PfGW456L13_266 at 310.411 kb on - strand, within PfGW456L13_266 at 310.436 kb on + strand, within PfGW456L13_266 at 310.436 kb on + strand, within PfGW456L13_266 at 310.689 kb on + strand at 310.689 kb on + strand at 310.689 kb on + strand at 310.689 kb on + strand at 310.689 kb on + strand at 310.689 kb on + strand at 310.689 kb on + strand at 310.690 kb on - strand at 310.690 kb on - strand at 310.690 kb on - strand at 310.912 kb on + strand, within PfGW456L13_267 at 310.912 kb on + strand, within PfGW456L13_267 at 310.913 kb on - strand, within PfGW456L13_267 at 311.164 kb on + strand, within PfGW456L13_267 at 311.383 kb on + strand, within PfGW456L13_268 at 311.383 kb on + strand, within PfGW456L13_268 at 311.383 kb on + strand, within PfGW456L13_268 at 311.383 kb on + strand, within PfGW456L13_268 at 311.383 kb on + strand, within PfGW456L13_268 at 311.383 kb on + strand, within PfGW456L13_268 at 311.384 kb on - strand, within PfGW456L13_268 at 311.384 kb on - strand, within PfGW456L13_268 at 311.384 kb on - strand, within PfGW456L13_268 at 311.384 kb on - strand, within PfGW456L13_268 at 311.384 kb on - strand, within PfGW456L13_268 at 311.461 kb on + strand, within PfGW456L13_268 at 311.461 kb on + strand, within PfGW456L13_268 at 311.462 kb on - strand, within PfGW456L13_268 at 311.462 kb on - strand, within PfGW456L13_268 at 311.522 kb on + strand, within PfGW456L13_268 at 311.523 kb on - strand, within PfGW456L13_268 at 311.523 kb on - strand, within PfGW456L13_268 at 311.523 kb on - strand, within PfGW456L13_268 at 311.592 kb on + strand, within PfGW456L13_268 at 311.624 kb on + strand, within PfGW456L13_268 at 311.625 kb on - strand, within PfGW456L13_268
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 307,919 - PfGW456L13_265 0.42 +0.6 307,919 - PfGW456L13_265 0.42 -1.7 307,985 - PfGW456L13_265 0.47 +0.6 308,033 + PfGW456L13_265 0.50 -1.8 308,034 - +0.6 308,345 + PfGW456L13_265 0.71 -0.3 308,346 - PfGW456L13_265 0.71 +0.4 308,359 + PfGW456L13_265 0.72 -1.8 308,359 + PfGW456L13_265 0.72 +0.4 308,360 - PfGW456L13_265 0.72 +0.2 308,590 + PfGW456L13_265 0.88 -0.1 308,590 + PfGW456L13_265 0.88 +0.7 308,675 + +0.4 308,675 + -0.3 308,676 - -0.2 308,909 + +0.2 308,910 - -0.3 308,910 - -0.6 308,943 + +0.0 309,029 + PfGW456L13_266 0.13 -0.2 309,230 - PfGW456L13_266 0.24 +0.1 309,251 + PfGW456L13_266 0.25 +0.4 309,251 + PfGW456L13_266 0.25 +0.6 309,251 + PfGW456L13_266 0.25 -1.1 309,251 + PfGW456L13_266 0.25 -0.7 309,251 + PfGW456L13_266 0.25 -0.7 309,251 + PfGW456L13_266 0.25 +0.0 309,251 + PfGW456L13_266 0.25 +0.5 309,251 + PfGW456L13_266 0.25 -0.7 309,251 + PfGW456L13_266 0.25 +0.1 309,251 + PfGW456L13_266 0.25 -0.2 309,251 + PfGW456L13_266 0.25 -0.0 309,251 + PfGW456L13_266 0.25 -0.7 309,252 - PfGW456L13_266 0.25 +0.1 309,252 - PfGW456L13_266 0.25 -0.5 309,252 - PfGW456L13_266 0.25 -0.6 309,252 - PfGW456L13_266 0.25 -2.4 309,252 - PfGW456L13_266 0.25 -1.4 309,252 - PfGW456L13_266 0.25 +0.1 309,252 - PfGW456L13_266 0.25 +0.2 309,252 - PfGW456L13_266 0.25 -0.7 309,335 + PfGW456L13_266 0.29 +0.2 309,335 + PfGW456L13_266 0.29 +0.2 309,336 - PfGW456L13_266 0.29 -0.6 309,336 - PfGW456L13_266 0.29 +0.0 309,930 + PfGW456L13_266 0.60 -1.3 310,024 + PfGW456L13_266 0.65 -3.0 310,024 + PfGW456L13_266 0.65 +0.7 310,024 + PfGW456L13_266 0.65 -0.0 310,168 - PfGW456L13_266 0.72 +1.1 310,168 - PfGW456L13_266 0.72 -0.4 310,168 - PfGW456L13_266 0.72 -0.6 310,226 + PfGW456L13_266 0.76 -0.6 310,226 + PfGW456L13_266 0.76 +0.1 310,227 - PfGW456L13_266 0.76 +0.9 310,227 - PfGW456L13_266 0.76 -0.4 310,227 - PfGW456L13_266 0.76 -0.8 310,333 + PfGW456L13_266 0.81 +0.1 310,410 + PfGW456L13_266 0.85 -1.5 310,411 - PfGW456L13_266 0.85 +0.6 310,436 + PfGW456L13_266 0.86 +0.6 310,436 + PfGW456L13_266 0.86 +1.1 310,689 + -0.3 310,689 + -1.4 310,689 + +0.4 310,689 + +0.1 310,689 + -0.4 310,689 + +0.8 310,689 + -0.2 310,690 - -0.2 310,690 - +0.7 310,690 - -0.1 310,912 + PfGW456L13_267 0.38 -0.2 310,912 + PfGW456L13_267 0.38 +1.8 310,913 - PfGW456L13_267 0.38 -2.8 311,164 + PfGW456L13_267 0.85 +0.4 311,383 + PfGW456L13_268 0.23 -0.8 311,383 + PfGW456L13_268 0.23 -0.4 311,383 + PfGW456L13_268 0.23 +0.2 311,383 + PfGW456L13_268 0.23 +1.6 311,383 + PfGW456L13_268 0.23 -0.6 311,383 + PfGW456L13_268 0.23 +0.1 311,384 - PfGW456L13_268 0.24 -0.9 311,384 - PfGW456L13_268 0.24 +2.3 311,384 - PfGW456L13_268 0.24 +0.1 311,384 - PfGW456L13_268 0.24 +1.2 311,384 - PfGW456L13_268 0.24 +0.3 311,461 + PfGW456L13_268 0.37 +0.6 311,461 + PfGW456L13_268 0.37 -1.0 311,462 - PfGW456L13_268 0.37 +1.0 311,462 - PfGW456L13_268 0.37 +0.3 311,522 + PfGW456L13_268 0.48 -0.2 311,523 - PfGW456L13_268 0.48 +0.4 311,523 - PfGW456L13_268 0.48 +0.3 311,523 - PfGW456L13_268 0.48 +0.8 311,592 + PfGW456L13_268 0.60 -0.3 311,624 + PfGW456L13_268 0.66 -1.7 311,625 - PfGW456L13_268 0.66 -0.6
Or see this region's nucleotide sequence