Experiment: m.b. 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1136 and B158DRAFT_1137 are separated by 106 nucleotides B158DRAFT_1137 and B158DRAFT_1138 overlap by 14 nucleotides B158DRAFT_1138 and B158DRAFT_1139 are separated by 8 nucleotides B158DRAFT_1139 and B158DRAFT_1140 are separated by 20 nucleotides
B158DRAFT_1136: B158DRAFT_1136 - Holliday junction DNA helicase subunit RuvB, at 1,175,300 to 1,176,319
_1136
B158DRAFT_1137: B158DRAFT_1137 - tol-pal system-associated acyl-CoA thioesterase, at 1,176,426 to 1,176,845
_1137
B158DRAFT_1138: B158DRAFT_1138 - Cell division and transport-associated protein TolQ (TC 2.C.1.2.1), at 1,176,832 to 1,177,545
_1138
B158DRAFT_1139: B158DRAFT_1139 - Cell division and transport-associated protein TolR (TC 2.C.1.2.1), at 1,177,554 to 1,177,982
_1139
B158DRAFT_1140: B158DRAFT_1140 - TolA protein, at 1,178,003 to 1,178,899
_1140
Position (kb)
1176
1177
1178 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1175.839 kb on - strand, within B158DRAFT_1136 at 1175.839 kb on - strand, within B158DRAFT_1136 at 1176.060 kb on - strand, within B158DRAFT_1136 at 1176.077 kb on + strand, within B158DRAFT_1136 at 1176.085 kb on - strand, within B158DRAFT_1136 at 1176.116 kb on + strand, within B158DRAFT_1136 at 1176.134 kb on + strand, within B158DRAFT_1136 at 1176.134 kb on + strand, within B158DRAFT_1136 at 1176.142 kb on - strand, within B158DRAFT_1136 at 1176.246 kb on - strand at 1176.428 kb on - strand at 1176.623 kb on + strand, within B158DRAFT_1137
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 37C remove 1,175,839 - B158DRAFT_1136 0.53 -0.2 1,175,839 - B158DRAFT_1136 0.53 -2.6 1,176,060 - B158DRAFT_1136 0.75 -2.4 1,176,077 + B158DRAFT_1136 0.76 -3.3 1,176,085 - B158DRAFT_1136 0.77 -1.1 1,176,116 + B158DRAFT_1136 0.80 -2.4 1,176,134 + B158DRAFT_1136 0.82 -0.2 1,176,134 + B158DRAFT_1136 0.82 -1.4 1,176,142 - B158DRAFT_1136 0.83 -0.9 1,176,246 - -0.6 1,176,428 - +0.1 1,176,623 + B158DRAFT_1137 0.47 -1.2
Or see this region's nucleotide sequence