Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0500

Experiment: m.b. 37C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0499 and B158DRAFT_0500 are separated by 510 nucleotidesB158DRAFT_0500 and B158DRAFT_0501 are separated by 48 nucleotides B158DRAFT_0499: B158DRAFT_0499 - DNA polymerase I (EC 2.7.7.7), at 499,744 to 502,482 _0499 B158DRAFT_0500: B158DRAFT_0500 - hypothetical protein, at 502,993 to 505,212 _0500 B158DRAFT_0501: B158DRAFT_0501 - hypothetical protein, at 505,261 to 506,118 _0501 Position (kb) 502 503 504 505 506Strain fitness (log2 ratio) -2 -1 0 1 2at 502.054 kb on + strand, within B158DRAFT_0499at 502.240 kb on + strandat 502.253 kb on - strandat 502.381 kb on + strandat 502.572 kb on + strandat 502.582 kb on + strandat 502.590 kb on - strandat 502.643 kb on + strandat 502.644 kb on - strandat 502.650 kb on + strandat 502.650 kb on + strandat 502.655 kb on + strandat 502.658 kb on - strandat 502.658 kb on - strandat 502.658 kb on - strandat 502.673 kb on - strandat 502.678 kb on + strandat 502.686 kb on - strandat 502.686 kb on - strandat 502.711 kb on - strandat 502.728 kb on - strandat 502.728 kb on - strandat 502.758 kb on - strandat 502.764 kb on + strandat 502.861 kb on - strandat 503.006 kb on + strandat 503.006 kb on + strandat 503.006 kb on + strandat 503.013 kb on + strandat 503.051 kb on + strandat 503.051 kb on + strandat 503.052 kb on + strandat 503.091 kb on - strandat 503.121 kb on - strandat 503.136 kb on - strandat 503.192 kb on + strandat 503.207 kb on + strandat 503.217 kb on + strand, within B158DRAFT_0500at 503.353 kb on - strand, within B158DRAFT_0500at 503.373 kb on - strand, within B158DRAFT_0500at 503.446 kb on + strand, within B158DRAFT_0500at 503.452 kb on - strand, within B158DRAFT_0500at 503.452 kb on - strand, within B158DRAFT_0500at 503.454 kb on + strand, within B158DRAFT_0500at 503.464 kb on + strand, within B158DRAFT_0500at 503.472 kb on - strand, within B158DRAFT_0500at 503.521 kb on - strand, within B158DRAFT_0500at 503.590 kb on + strand, within B158DRAFT_0500at 503.594 kb on - strand, within B158DRAFT_0500at 503.675 kb on + strand, within B158DRAFT_0500at 503.885 kb on + strand, within B158DRAFT_0500at 503.885 kb on + strand, within B158DRAFT_0500at 503.893 kb on - strand, within B158DRAFT_0500at 503.986 kb on + strand, within B158DRAFT_0500at 504.000 kb on - strand, within B158DRAFT_0500at 504.122 kb on - strand, within B158DRAFT_0500at 504.122 kb on - strand, within B158DRAFT_0500at 504.364 kb on - strand, within B158DRAFT_0500at 504.384 kb on + strand, within B158DRAFT_0500at 504.394 kb on + strand, within B158DRAFT_0500at 504.401 kb on + strand, within B158DRAFT_0500at 504.538 kb on - strand, within B158DRAFT_0500at 504.538 kb on - strand, within B158DRAFT_0500at 504.566 kb on - strand, within B158DRAFT_0500at 504.604 kb on - strand, within B158DRAFT_0500at 504.649 kb on - strand, within B158DRAFT_0500at 504.665 kb on + strand, within B158DRAFT_0500at 504.673 kb on - strand, within B158DRAFT_0500at 504.851 kb on - strand, within B158DRAFT_0500at 504.890 kb on + strand, within B158DRAFT_0500at 504.890 kb on + strand, within B158DRAFT_0500at 504.902 kb on + strand, within B158DRAFT_0500at 505.203 kb on - strandat 505.338 kb on + strandat 505.346 kb on - strandat 505.490 kb on + strand, within B158DRAFT_0501at 505.498 kb on - strand, within B158DRAFT_0501at 505.612 kb on - strand, within B158DRAFT_0501at 505.615 kb on + strand, within B158DRAFT_0501at 505.640 kb on + strand, within B158DRAFT_0501at 505.815 kb on + strand, within B158DRAFT_0501at 505.818 kb on - strand, within B158DRAFT_0501at 505.840 kb on + strand, within B158DRAFT_0501at 506.023 kb on + strand, within B158DRAFT_0501at 506.031 kb on - strand, within B158DRAFT_0501at 506.077 kb on + strandat 506.210 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 37C
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502,054 + B158DRAFT_0499 0.84 -1.6
502,240 + +1.3
502,253 - -0.6
502,381 + +1.3
502,572 + -0.2
502,582 + +0.0
502,590 - +0.6
502,643 + +0.1
502,644 - -1.0
502,650 + -0.3
502,650 + -0.5
502,655 + +0.0
502,658 - +0.1
502,658 - -2.0
502,658 - -0.1
502,673 - -0.1
502,678 + -0.1
502,686 - -0.7
502,686 - -0.1
502,711 - -0.6
502,728 - -0.1
502,728 - +0.1
502,758 - -0.6
502,764 + -0.9
502,861 - -0.4
503,006 + -0.2
503,006 + -0.2
503,006 + -0.2
503,013 + -0.3
503,051 + +0.0
503,051 + +0.7
503,052 + +0.4
503,091 - -0.6
503,121 - -0.4
503,136 - -1.3
503,192 + -0.3
503,207 + -0.4
503,217 + B158DRAFT_0500 0.10 +0.1
503,353 - B158DRAFT_0500 0.16 -0.2
503,373 - B158DRAFT_0500 0.17 -0.5
503,446 + B158DRAFT_0500 0.20 -0.4
503,452 - B158DRAFT_0500 0.21 -0.5
503,452 - B158DRAFT_0500 0.21 -0.3
503,454 + B158DRAFT_0500 0.21 -0.6
503,464 + B158DRAFT_0500 0.21 -0.0
503,472 - B158DRAFT_0500 0.22 -0.3
503,521 - B158DRAFT_0500 0.24 -0.0
503,590 + B158DRAFT_0500 0.27 +0.1
503,594 - B158DRAFT_0500 0.27 +0.5
503,675 + B158DRAFT_0500 0.31 -0.6
503,885 + B158DRAFT_0500 0.40 -0.9
503,885 + B158DRAFT_0500 0.40 -0.2
503,893 - B158DRAFT_0500 0.41 -0.2
503,986 + B158DRAFT_0500 0.45 -0.0
504,000 - B158DRAFT_0500 0.45 +0.6
504,122 - B158DRAFT_0500 0.51 -0.4
504,122 - B158DRAFT_0500 0.51 -2.3
504,364 - B158DRAFT_0500 0.62 -0.0
504,384 + B158DRAFT_0500 0.63 -0.5
504,394 + B158DRAFT_0500 0.63 +0.5
504,401 + B158DRAFT_0500 0.63 +0.2
504,538 - B158DRAFT_0500 0.70 +0.7
504,538 - B158DRAFT_0500 0.70 -2.2
504,566 - B158DRAFT_0500 0.71 -0.3
504,604 - B158DRAFT_0500 0.73 +2.1
504,649 - B158DRAFT_0500 0.75 -0.4
504,665 + B158DRAFT_0500 0.75 -0.6
504,673 - B158DRAFT_0500 0.76 +0.5
504,851 - B158DRAFT_0500 0.84 -0.6
504,890 + B158DRAFT_0500 0.85 -0.2
504,890 + B158DRAFT_0500 0.85 -0.5
504,902 + B158DRAFT_0500 0.86 +0.0
505,203 - -1.7
505,338 + +2.2
505,346 - +2.2
505,490 + B158DRAFT_0501 0.27 +2.4
505,498 - B158DRAFT_0501 0.28 +2.4
505,612 - B158DRAFT_0501 0.41 +2.6
505,615 + B158DRAFT_0501 0.41 +2.2
505,640 + B158DRAFT_0501 0.44 +2.3
505,815 + B158DRAFT_0501 0.65 +2.4
505,818 - B158DRAFT_0501 0.65 +2.0
505,840 + B158DRAFT_0501 0.67 +2.3
506,023 + B158DRAFT_0501 0.89 +1.8
506,031 - B158DRAFT_0501 0.90 +2.0
506,077 + +1.7
506,210 - -0.2

Or see this region's nucleotide sequence