Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4291 and PfGW456L13_4292 are separated by 98 nucleotides PfGW456L13_4292 and PfGW456L13_4293 overlap by 4 nucleotides PfGW456L13_4293 and PfGW456L13_4294 are separated by 223 nucleotides PfGW456L13_4294 and PfGW456L13_4295 are separated by 268 nucleotides
PfGW456L13_4291 - L-tryptophan transporter (from data) , at 4,807,060 to 4,808,463
_4291
PfGW456L13_4292 - Tryptophan 2,3-dioxygenase (EC 1.13.11.11) (from data) , at 4,808,562 to 4,809,416
_4292
PfGW456L13_4293 - Kynurenine formamidase, bacterial (EC 3.5.1.9) (from data) , at 4,809,413 to 4,810,078
_4293
PfGW456L13_4294 - GlcG protein, at 4,810,302 to 4,810,742
_4294
PfGW456L13_4295 - Glyoxylate carboligase (EC 4.1.1.47), at 4,811,011 to 4,812,786
_4295
Position (kb)
4809
4810
4811 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4808.469 kb on + strand at 4808.476 kb on + strand at 4808.476 kb on + strand at 4808.477 kb on - strand at 4808.477 kb on - strand at 4808.477 kb on - strand at 4808.477 kb on - strand at 4808.484 kb on - strand at 4808.606 kb on + strand at 4808.626 kb on + strand at 4808.752 kb on + strand, within PfGW456L13_4292 at 4808.782 kb on + strand, within PfGW456L13_4292 at 4808.783 kb on - strand, within PfGW456L13_4292 at 4808.905 kb on + strand, within PfGW456L13_4292 at 4808.905 kb on + strand, within PfGW456L13_4292 at 4808.906 kb on - strand, within PfGW456L13_4292 at 4808.906 kb on - strand, within PfGW456L13_4292 at 4808.906 kb on - strand, within PfGW456L13_4292 at 4809.325 kb on + strand, within PfGW456L13_4292 at 4809.325 kb on + strand, within PfGW456L13_4292 at 4809.368 kb on + strand at 4809.519 kb on + strand, within PfGW456L13_4293 at 4809.519 kb on + strand, within PfGW456L13_4293 at 4809.519 kb on + strand, within PfGW456L13_4293 at 4809.563 kb on - strand, within PfGW456L13_4293 at 4809.849 kb on + strand, within PfGW456L13_4293 at 4809.849 kb on + strand, within PfGW456L13_4293 at 4809.849 kb on + strand, within PfGW456L13_4293 at 4809.849 kb on + strand, within PfGW456L13_4293 at 4809.849 kb on + strand, within PfGW456L13_4293 at 4809.849 kb on + strand, within PfGW456L13_4293 at 4809.849 kb on + strand, within PfGW456L13_4293 at 4809.850 kb on - strand, within PfGW456L13_4293 at 4809.850 kb on - strand, within PfGW456L13_4293 at 4809.850 kb on - strand, within PfGW456L13_4293 at 4809.850 kb on - strand, within PfGW456L13_4293 at 4809.850 kb on - strand, within PfGW456L13_4293 at 4809.850 kb on - strand, within PfGW456L13_4293 at 4809.850 kb on - strand, within PfGW456L13_4293 at 4809.850 kb on - strand, within PfGW456L13_4293 at 4809.850 kb on - strand, within PfGW456L13_4293 at 4809.850 kb on - strand, within PfGW456L13_4293 at 4809.850 kb on - strand, within PfGW456L13_4293 at 4809.850 kb on - strand, within PfGW456L13_4293 at 4809.894 kb on + strand, within PfGW456L13_4293 at 4809.894 kb on + strand, within PfGW456L13_4293 at 4809.895 kb on - strand, within PfGW456L13_4293 at 4809.926 kb on - strand, within PfGW456L13_4293 at 4809.944 kb on - strand, within PfGW456L13_4293 at 4810.021 kb on + strand at 4810.021 kb on + strand at 4810.021 kb on + strand at 4810.021 kb on + strand at 4810.021 kb on + strand at 4810.021 kb on + strand at 4810.022 kb on - strand at 4810.022 kb on - strand at 4810.022 kb on - strand at 4810.027 kb on + strand at 4810.027 kb on + strand at 4810.027 kb on + strand at 4810.028 kb on - strand at 4810.028 kb on - strand at 4810.028 kb on - strand at 4810.028 kb on - strand at 4810.028 kb on - strand at 4810.112 kb on - strand at 4810.120 kb on + strand at 4810.120 kb on + strand at 4810.121 kb on - strand at 4810.121 kb on - strand at 4810.121 kb on - strand at 4810.121 kb on - strand at 4810.230 kb on + strand at 4810.230 kb on + strand at 4810.230 kb on + strand at 4810.230 kb on + strand at 4810.231 kb on - strand at 4810.285 kb on - strand at 4810.648 kb on - strand, within PfGW456L13_4294 at 4810.732 kb on - strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.954 kb on + strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand at 4810.955 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 4,808,469 + -0.5 4,808,476 + +0.6 4,808,476 + +0.7 4,808,477 - +1.2 4,808,477 - +0.6 4,808,477 - +1.4 4,808,477 - +0.7 4,808,484 - +0.6 4,808,606 + +2.8 4,808,626 + +0.2 4,808,752 + PfGW456L13_4292 0.22 +0.5 4,808,782 + PfGW456L13_4292 0.26 +0.4 4,808,783 - PfGW456L13_4292 0.26 -0.0 4,808,905 + PfGW456L13_4292 0.40 +1.2 4,808,905 + PfGW456L13_4292 0.40 +1.7 4,808,906 - PfGW456L13_4292 0.40 +1.6 4,808,906 - PfGW456L13_4292 0.40 -0.5 4,808,906 - PfGW456L13_4292 0.40 +1.0 4,809,325 + PfGW456L13_4292 0.89 +0.6 4,809,325 + PfGW456L13_4292 0.89 +0.9 4,809,368 + +1.4 4,809,519 + PfGW456L13_4293 0.16 +0.6 4,809,519 + PfGW456L13_4293 0.16 -0.2 4,809,519 + PfGW456L13_4293 0.16 -0.2 4,809,563 - PfGW456L13_4293 0.23 -0.3 4,809,849 + PfGW456L13_4293 0.65 -2.4 4,809,849 + PfGW456L13_4293 0.65 +1.0 4,809,849 + PfGW456L13_4293 0.65 -0.5 4,809,849 + PfGW456L13_4293 0.65 -0.2 4,809,849 + PfGW456L13_4293 0.65 -0.2 4,809,849 + PfGW456L13_4293 0.65 -0.2 4,809,849 + PfGW456L13_4293 0.65 +0.6 4,809,850 - PfGW456L13_4293 0.66 -0.1 4,809,850 - PfGW456L13_4293 0.66 -1.8 4,809,850 - PfGW456L13_4293 0.66 -2.7 4,809,850 - PfGW456L13_4293 0.66 -0.0 4,809,850 - PfGW456L13_4293 0.66 -0.5 4,809,850 - PfGW456L13_4293 0.66 -0.3 4,809,850 - PfGW456L13_4293 0.66 +0.8 4,809,850 - PfGW456L13_4293 0.66 +0.2 4,809,850 - PfGW456L13_4293 0.66 +0.5 4,809,850 - PfGW456L13_4293 0.66 -0.4 4,809,850 - PfGW456L13_4293 0.66 +1.5 4,809,850 - PfGW456L13_4293 0.66 +0.2 4,809,894 + PfGW456L13_4293 0.72 +0.1 4,809,894 + PfGW456L13_4293 0.72 +0.8 4,809,895 - PfGW456L13_4293 0.72 -0.5 4,809,926 - PfGW456L13_4293 0.77 -0.1 4,809,944 - PfGW456L13_4293 0.80 +1.0 4,810,021 + +0.7 4,810,021 + -0.3 4,810,021 + -0.8 4,810,021 + -2.1 4,810,021 + +0.0 4,810,021 + +1.0 4,810,022 - +0.2 4,810,022 - -0.0 4,810,022 - +0.8 4,810,027 + -0.1 4,810,027 + -1.6 4,810,027 + +0.6 4,810,028 - -0.1 4,810,028 - -0.3 4,810,028 - +0.5 4,810,028 - -0.2 4,810,028 - -2.1 4,810,112 - +1.5 4,810,120 + -1.9 4,810,120 + -0.0 4,810,121 - -0.0 4,810,121 - -0.6 4,810,121 - +0.5 4,810,121 - +0.2 4,810,230 + -0.2 4,810,230 + +1.2 4,810,230 + -0.9 4,810,230 + +0.5 4,810,231 - +0.7 4,810,285 - +0.1 4,810,648 - PfGW456L13_4294 0.78 +1.0 4,810,732 - -0.2 4,810,954 + -0.0 4,810,954 + -0.3 4,810,954 + -0.8 4,810,954 + -1.8 4,810,954 + +0.4 4,810,954 + -0.1 4,810,954 + -0.0 4,810,954 + -0.6 4,810,954 + -0.2 4,810,954 + -1.2 4,810,954 + -0.7 4,810,954 + -0.7 4,810,954 + +0.7 4,810,954 + -1.3 4,810,954 + -0.9 4,810,954 + -0.7 4,810,954 + +0.3 4,810,954 + +0.0 4,810,954 + +0.1 4,810,954 + +0.3 4,810,954 + -0.6 4,810,954 + -0.6 4,810,954 + +0.1 4,810,954 + -0.4 4,810,954 + +2.8 4,810,955 - -0.3 4,810,955 - +0.4 4,810,955 - -0.1 4,810,955 - -0.8 4,810,955 - -0.2 4,810,955 - -2.4 4,810,955 - +0.5 4,810,955 - -1.6 4,810,955 - +0.1 4,810,955 - +1.3 4,810,955 - -1.3 4,810,955 - +0.9 4,810,955 - -0.5 4,810,955 - +0.8 4,810,955 - +0.1 4,810,955 - +1.1 4,810,955 - +1.2 4,810,955 - +0.1 4,810,955 - -0.9 4,810,955 - +0.4 4,810,955 - -1.1 4,810,955 - -0.0 4,810,955 - +1.0 4,810,955 - -0.0 4,810,955 - -1.4
Or see this region's nucleotide sequence