Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2818 and PfGW456L13_2819 are separated by 165 nucleotides PfGW456L13_2819 and PfGW456L13_2820 overlap by 1 nucleotides PfGW456L13_2820 and PfGW456L13_2821 are separated by 7 nucleotides
PfGW456L13_2818 - FIG028220: hypothetical protein co-occurring with HEAT repeat protein, at 3,123,893 to 3,124,171
_2818
PfGW456L13_2819 - SOS-response repressor and protease LexA (EC 3.4.21.88), at 3,124,337 to 3,124,954
_2819
PfGW456L13_2820 - RecA/RadA recombinase, at 3,124,954 to 3,125,571
_2820
PfGW456L13_2821 - DNA polymerase-like protein PA0670, at 3,125,579 to 3,126,994
_2821
Position (kb) 3124
3125
3126 Strain fitness (log2 ratio) -1
0
1 at 3124.092 kb on - strand, within PfGW456L13_2818 at 3124.136 kb on + strand, within PfGW456L13_2818 at 3124.136 kb on + strand, within PfGW456L13_2818 at 3124.148 kb on + strand at 3124.148 kb on + strand at 3124.148 kb on + strand at 3124.149 kb on - strand at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.689 kb on - strand, within PfGW456L13_2819 at 3124.689 kb on - strand, within PfGW456L13_2819 at 3124.689 kb on - strand, within PfGW456L13_2819 at 3124.689 kb on - strand, within PfGW456L13_2819 at 3124.689 kb on - strand, within PfGW456L13_2819 at 3124.877 kb on + strand, within PfGW456L13_2819 at 3124.877 kb on + strand, within PfGW456L13_2819 at 3125.212 kb on + strand, within PfGW456L13_2820 at 3125.212 kb on + strand, within PfGW456L13_2820 at 3125.212 kb on + strand, within PfGW456L13_2820 at 3125.212 kb on + strand, within PfGW456L13_2820 at 3125.213 kb on - strand, within PfGW456L13_2820 at 3125.213 kb on - strand, within PfGW456L13_2820 at 3125.213 kb on - strand, within PfGW456L13_2820 at 3125.221 kb on + strand, within PfGW456L13_2820 at 3125.625 kb on + strand at 3126.035 kb on + strand, within PfGW456L13_2821 at 3126.187 kb on + strand at 3126.187 kb on + strand, within PfGW456L13_2821 at 3126.187 kb on + strand, within PfGW456L13_2821 at 3126.188 kb on - strand, within PfGW456L13_2821 at 3126.269 kb on + strand, within PfGW456L13_2821 at 3126.269 kb on + strand, within PfGW456L13_2821 at 3126.270 kb on - strand, within PfGW456L13_2821
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 3,124,092 - PfGW456L13_2818 0.71 -0.0 3,124,136 + PfGW456L13_2818 0.87 -0.2 3,124,136 + PfGW456L13_2818 0.87 +0.6 3,124,148 + +1.3 3,124,148 + -0.3 3,124,148 + +0.6 3,124,149 - +1.6 3,124,688 + PfGW456L13_2819 0.57 +1.7 3,124,688 + PfGW456L13_2819 0.57 -1.0 3,124,688 + PfGW456L13_2819 0.57 +0.2 3,124,688 + PfGW456L13_2819 0.57 +0.5 3,124,688 + PfGW456L13_2819 0.57 +1.6 3,124,688 + PfGW456L13_2819 0.57 +0.2 3,124,688 + -0.0 3,124,688 + PfGW456L13_2819 0.57 -0.7 3,124,688 + PfGW456L13_2819 0.57 +0.1 3,124,688 + PfGW456L13_2819 0.57 -0.2 3,124,688 + PfGW456L13_2819 0.57 +1.1 3,124,689 - PfGW456L13_2819 0.57 +0.3 3,124,689 - PfGW456L13_2819 0.57 -0.2 3,124,689 - PfGW456L13_2819 0.57 +0.3 3,124,689 - PfGW456L13_2819 0.57 +0.6 3,124,689 - PfGW456L13_2819 0.57 -0.3 3,124,877 + PfGW456L13_2819 0.87 +1.2 3,124,877 + PfGW456L13_2819 0.87 +1.1 3,125,212 + PfGW456L13_2820 0.42 +0.3 3,125,212 + PfGW456L13_2820 0.42 -0.2 3,125,212 + PfGW456L13_2820 0.42 -0.0 3,125,212 + PfGW456L13_2820 0.42 +1.0 3,125,213 - PfGW456L13_2820 0.42 +0.6 3,125,213 - PfGW456L13_2820 0.42 +0.9 3,125,213 - PfGW456L13_2820 0.42 +0.7 3,125,221 + PfGW456L13_2820 0.43 -0.2 3,125,625 + +0.1 3,126,035 + PfGW456L13_2821 0.32 -0.1 3,126,187 + -0.8 3,126,187 + PfGW456L13_2821 0.43 +1.6 3,126,187 + PfGW456L13_2821 0.43 -0.3 3,126,188 - PfGW456L13_2821 0.43 +0.2 3,126,269 + PfGW456L13_2821 0.49 -0.8 3,126,269 + PfGW456L13_2821 0.49 -0.7 3,126,270 - PfGW456L13_2821 0.49 -0.2
Or see this region's nucleotide sequence