Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2175 and PfGW456L13_2176 overlap by 1 nucleotides PfGW456L13_2176 and PfGW456L13_2177 are separated by 13 nucleotides
PfGW456L13_2175 - Phosphoserine aminotransferase (EC 2.6.1.52), at 2,382,720 to 2,383,811
_2175
PfGW456L13_2176 - Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51), at 2,383,811 to 2,384,905
_2176
PfGW456L13_2177 - Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57), at 2,384,919 to 2,386,031
_2177
Position (kb)
2383
2384
2385 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2383.961 kb on + strand, within PfGW456L13_2176 at 2383.961 kb on + strand, within PfGW456L13_2176 at 2383.961 kb on + strand, within PfGW456L13_2176 at 2383.961 kb on + strand, within PfGW456L13_2176 at 2384.102 kb on + strand, within PfGW456L13_2176 at 2384.102 kb on + strand, within PfGW456L13_2176 at 2384.102 kb on + strand, within PfGW456L13_2176 at 2384.593 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.780 kb on + strand, within PfGW456L13_2176 at 2384.903 kb on + strand at 2384.973 kb on + strand at 2384.973 kb on + strand at 2385.032 kb on + strand, within PfGW456L13_2177 at 2385.032 kb on + strand, within PfGW456L13_2177 at 2385.243 kb on + strand, within PfGW456L13_2177 at 2385.516 kb on + strand, within PfGW456L13_2177 at 2385.516 kb on + strand, within PfGW456L13_2177 at 2385.516 kb on + strand, within PfGW456L13_2177 at 2385.516 kb on + strand, within PfGW456L13_2177 at 2385.516 kb on + strand, within PfGW456L13_2177 at 2385.516 kb on + strand, within PfGW456L13_2177 at 2385.516 kb on + strand, within PfGW456L13_2177 at 2385.516 kb on + strand, within PfGW456L13_2177 at 2385.516 kb on + strand, within PfGW456L13_2177 at 2385.639 kb on + strand, within PfGW456L13_2177 at 2385.682 kb on + strand, within PfGW456L13_2177 at 2385.750 kb on + strand, within PfGW456L13_2177 at 2385.750 kb on + strand, within PfGW456L13_2177 at 2385.750 kb on + strand, within PfGW456L13_2177
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 2,383,961 + PfGW456L13_2176 0.14 -2.2 2,383,961 + PfGW456L13_2176 0.14 -2.5 2,383,961 + PfGW456L13_2176 0.14 -3.5 2,383,961 + PfGW456L13_2176 0.14 -3.2 2,384,102 + PfGW456L13_2176 0.27 -2.4 2,384,102 + PfGW456L13_2176 0.27 -3.5 2,384,102 + PfGW456L13_2176 0.27 -2.8 2,384,593 + PfGW456L13_2176 0.71 -3.0 2,384,780 + PfGW456L13_2176 0.88 -3.3 2,384,780 + PfGW456L13_2176 0.88 -3.0 2,384,780 + PfGW456L13_2176 0.88 -4.5 2,384,780 + PfGW456L13_2176 0.88 -2.5 2,384,780 + PfGW456L13_2176 0.88 -2.0 2,384,780 + PfGW456L13_2176 0.88 -2.6 2,384,780 + PfGW456L13_2176 0.88 -2.4 2,384,780 + PfGW456L13_2176 0.88 -1.7 2,384,780 + PfGW456L13_2176 0.88 -2.6 2,384,780 + PfGW456L13_2176 0.88 -3.9 2,384,780 + PfGW456L13_2176 0.88 -1.3 2,384,903 + -1.2 2,384,973 + -0.4 2,384,973 + -1.2 2,385,032 + PfGW456L13_2177 0.10 -1.6 2,385,032 + PfGW456L13_2177 0.10 -0.8 2,385,243 + PfGW456L13_2177 0.29 -1.2 2,385,516 + PfGW456L13_2177 0.54 +1.1 2,385,516 + PfGW456L13_2177 0.54 -0.6 2,385,516 + PfGW456L13_2177 0.54 -1.6 2,385,516 + PfGW456L13_2177 0.54 -0.2 2,385,516 + PfGW456L13_2177 0.54 -1.5 2,385,516 + PfGW456L13_2177 0.54 -1.2 2,385,516 + PfGW456L13_2177 0.54 -0.7 2,385,516 + PfGW456L13_2177 0.54 -2.1 2,385,516 + PfGW456L13_2177 0.54 +0.2 2,385,639 + PfGW456L13_2177 0.65 -0.1 2,385,682 + PfGW456L13_2177 0.69 -1.2 2,385,750 + PfGW456L13_2177 0.75 +0.8 2,385,750 + PfGW456L13_2177 0.75 +1.0 2,385,750 + PfGW456L13_2177 0.75 -0.6
Or see this region's nucleotide sequence