Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2356

Experiment: m.b. 37C

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2355 and B158DRAFT_2356 are separated by 43 nucleotidesB158DRAFT_2356 and B158DRAFT_2357 are separated by 3 nucleotides B158DRAFT_2355: B158DRAFT_2355 - hypothetical protein, at 523,130 to 524,119 _2355 B158DRAFT_2356: B158DRAFT_2356 - Uncharacterized protein conserved in bacteria, at 524,163 to 527,717 _2356 B158DRAFT_2357: B158DRAFT_2357 - Glycosyltransferase, at 527,721 to 529,601 _2357 Position (kb) 524 525 526 527 528Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 523.490 kb on + strand, within B158DRAFT_2355at 523.825 kb on - strand, within B158DRAFT_2355at 523.859 kb on + strand, within B158DRAFT_2355at 524.100 kb on + strandat 524.108 kb on - strandat 524.108 kb on - strandat 524.202 kb on - strandat 524.778 kb on + strand, within B158DRAFT_2356at 524.855 kb on + strand, within B158DRAFT_2356at 524.855 kb on + strand, within B158DRAFT_2356at 525.878 kb on + strand, within B158DRAFT_2356at 526.032 kb on + strand, within B158DRAFT_2356at 526.147 kb on + strand, within B158DRAFT_2356at 526.504 kb on + strand, within B158DRAFT_2356at 526.823 kb on - strand, within B158DRAFT_2356at 527.589 kb on - strandat 528.559 kb on - strand, within B158DRAFT_2357at 528.606 kb on - strand, within B158DRAFT_2357at 528.622 kb on - strand, within B158DRAFT_2357

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 37C
remove
523,490 + B158DRAFT_2355 0.36 -0.5
523,825 - B158DRAFT_2355 0.70 -2.0
523,859 + B158DRAFT_2355 0.74 -0.7
524,100 + -0.0
524,108 - -2.7
524,108 - -1.9
524,202 - -2.9
524,778 + B158DRAFT_2356 0.17 -2.8
524,855 + B158DRAFT_2356 0.19 -2.9
524,855 + B158DRAFT_2356 0.19 -1.6
525,878 + B158DRAFT_2356 0.48 -3.5
526,032 + B158DRAFT_2356 0.53 -2.2
526,147 + B158DRAFT_2356 0.56 -4.0
526,504 + B158DRAFT_2356 0.66 -3.6
526,823 - B158DRAFT_2356 0.75 -1.6
527,589 - -3.1
528,559 - B158DRAFT_2357 0.45 -3.3
528,606 - B158DRAFT_2357 0.47 -1.8
528,622 - B158DRAFT_2357 0.48 -1.7

Or see this region's nucleotide sequence