Experiment: m.b. 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1133 and B158DRAFT_1134 are separated by 71 nucleotides B158DRAFT_1134 and B158DRAFT_1135 are separated by 272 nucleotides B158DRAFT_1135 and B158DRAFT_1136 are separated by 110 nucleotides
B158DRAFT_1133: B158DRAFT_1133 - hypothetical protein, at 1,171,673 to 1,172,344
_1133
B158DRAFT_1134: B158DRAFT_1134 - hypothetical protein, at 1,172,416 to 1,172,961
_1134
B158DRAFT_1135: B158DRAFT_1135 - ATPase components of ABC transporters with duplicated ATPase domains, at 1,173,234 to 1,175,189
_1135
B158DRAFT_1136: B158DRAFT_1136 - Holliday junction DNA helicase subunit RuvB, at 1,175,300 to 1,176,319
_1136
Position (kb)
1173
1174
1175
1176 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1172.314 kb on + strand at 1172.314 kb on + strand at 1172.322 kb on - strand at 1172.322 kb on - strand at 1172.354 kb on + strand at 1172.448 kb on + strand at 1172.473 kb on + strand, within B158DRAFT_1134 at 1172.473 kb on + strand, within B158DRAFT_1134 at 1172.481 kb on - strand, within B158DRAFT_1134 at 1172.481 kb on - strand, within B158DRAFT_1134 at 1172.496 kb on + strand, within B158DRAFT_1134 at 1172.570 kb on + strand, within B158DRAFT_1134 at 1172.577 kb on + strand, within B158DRAFT_1134 at 1172.578 kb on - strand, within B158DRAFT_1134 at 1172.578 kb on - strand, within B158DRAFT_1134 at 1172.609 kb on + strand, within B158DRAFT_1134 at 1172.609 kb on + strand, within B158DRAFT_1134 at 1172.615 kb on + strand, within B158DRAFT_1134 at 1172.617 kb on - strand, within B158DRAFT_1134 at 1172.617 kb on - strand, within B158DRAFT_1134 at 1172.663 kb on - strand, within B158DRAFT_1134 at 1172.673 kb on - strand, within B158DRAFT_1134 at 1172.673 kb on - strand, within B158DRAFT_1134 at 1172.680 kb on + strand, within B158DRAFT_1134 at 1172.707 kb on + strand, within B158DRAFT_1134 at 1172.707 kb on + strand, within B158DRAFT_1134 at 1172.708 kb on - strand, within B158DRAFT_1134 at 1172.716 kb on + strand, within B158DRAFT_1134 at 1172.758 kb on - strand, within B158DRAFT_1134 at 1172.890 kb on + strand, within B158DRAFT_1134 at 1172.890 kb on + strand, within B158DRAFT_1134 at 1172.890 kb on + strand, within B158DRAFT_1134 at 1172.890 kb on + strand, within B158DRAFT_1134 at 1172.890 kb on + strand, within B158DRAFT_1134 at 1172.890 kb on + strand, within B158DRAFT_1134 at 1172.890 kb on + strand, within B158DRAFT_1134 at 1172.890 kb on + strand, within B158DRAFT_1134 at 1172.903 kb on + strand, within B158DRAFT_1134 at 1172.911 kb on - strand at 1173.003 kb on + strand at 1173.011 kb on - strand at 1173.212 kb on + strand at 1173.212 kb on + strand at 1173.255 kb on + strand at 1173.327 kb on - strand at 1173.343 kb on - strand at 1173.366 kb on + strand at 1173.391 kb on - strand at 1173.491 kb on + strand, within B158DRAFT_1135 at 1173.493 kb on + strand, within B158DRAFT_1135 at 1173.501 kb on - strand, within B158DRAFT_1135 at 1173.503 kb on + strand, within B158DRAFT_1135 at 1173.503 kb on + strand, within B158DRAFT_1135 at 1173.506 kb on - strand, within B158DRAFT_1135 at 1173.539 kb on + strand, within B158DRAFT_1135 at 1173.614 kb on + strand, within B158DRAFT_1135 at 1173.642 kb on - strand, within B158DRAFT_1135 at 1173.643 kb on - strand, within B158DRAFT_1135 at 1173.649 kb on + strand, within B158DRAFT_1135 at 1173.667 kb on + strand, within B158DRAFT_1135 at 1173.676 kb on - strand, within B158DRAFT_1135 at 1173.704 kb on - strand, within B158DRAFT_1135 at 1173.704 kb on - strand, within B158DRAFT_1135 at 1173.743 kb on + strand, within B158DRAFT_1135 at 1173.744 kb on + strand, within B158DRAFT_1135 at 1173.744 kb on + strand, within B158DRAFT_1135 at 1173.744 kb on + strand, within B158DRAFT_1135 at 1173.752 kb on - strand, within B158DRAFT_1135 at 1173.752 kb on - strand, within B158DRAFT_1135 at 1173.752 kb on - strand, within B158DRAFT_1135 at 1173.752 kb on - strand, within B158DRAFT_1135 at 1173.752 kb on - strand, within B158DRAFT_1135 at 1173.805 kb on - strand, within B158DRAFT_1135 at 1173.928 kb on - strand, within B158DRAFT_1135 at 1174.037 kb on + strand, within B158DRAFT_1135 at 1174.039 kb on - strand, within B158DRAFT_1135 at 1174.040 kb on - strand, within B158DRAFT_1135 at 1174.040 kb on - strand, within B158DRAFT_1135 at 1174.052 kb on + strand, within B158DRAFT_1135 at 1174.058 kb on + strand, within B158DRAFT_1135 at 1174.060 kb on - strand, within B158DRAFT_1135 at 1174.066 kb on - strand, within B158DRAFT_1135 at 1174.094 kb on + strand, within B158DRAFT_1135 at 1174.134 kb on + strand, within B158DRAFT_1135 at 1174.134 kb on + strand, within B158DRAFT_1135 at 1174.134 kb on + strand, within B158DRAFT_1135 at 1174.161 kb on - strand, within B158DRAFT_1135 at 1174.207 kb on - strand, within B158DRAFT_1135 at 1174.207 kb on - strand, within B158DRAFT_1135 at 1174.296 kb on - strand, within B158DRAFT_1135 at 1174.296 kb on - strand, within B158DRAFT_1135 at 1174.307 kb on + strand, within B158DRAFT_1135 at 1174.310 kb on - strand, within B158DRAFT_1135 at 1174.348 kb on - strand, within B158DRAFT_1135 at 1174.376 kb on + strand, within B158DRAFT_1135 at 1174.376 kb on - strand, within B158DRAFT_1135 at 1174.428 kb on - strand, within B158DRAFT_1135 at 1174.475 kb on + strand, within B158DRAFT_1135 at 1174.482 kb on - strand, within B158DRAFT_1135 at 1174.482 kb on - strand, within B158DRAFT_1135 at 1174.490 kb on + strand, within B158DRAFT_1135 at 1174.497 kb on - strand, within B158DRAFT_1135 at 1174.531 kb on - strand, within B158DRAFT_1135 at 1174.531 kb on - strand, within B158DRAFT_1135 at 1174.587 kb on + strand, within B158DRAFT_1135 at 1174.594 kb on - strand, within B158DRAFT_1135 at 1174.625 kb on + strand, within B158DRAFT_1135 at 1174.715 kb on + strand, within B158DRAFT_1135 at 1174.723 kb on - strand, within B158DRAFT_1135 at 1174.736 kb on + strand, within B158DRAFT_1135 at 1174.744 kb on - strand, within B158DRAFT_1135 at 1174.744 kb on - strand, within B158DRAFT_1135 at 1174.775 kb on + strand, within B158DRAFT_1135 at 1174.783 kb on - strand, within B158DRAFT_1135 at 1174.783 kb on - strand, within B158DRAFT_1135 at 1174.790 kb on + strand, within B158DRAFT_1135 at 1174.790 kb on + strand, within B158DRAFT_1135 at 1174.790 kb on + strand, within B158DRAFT_1135 at 1174.790 kb on + strand, within B158DRAFT_1135 at 1174.790 kb on + strand, within B158DRAFT_1135 at 1174.798 kb on - strand, within B158DRAFT_1135 at 1174.798 kb on - strand, within B158DRAFT_1135 at 1174.798 kb on - strand, within B158DRAFT_1135 at 1174.798 kb on - strand, within B158DRAFT_1135 at 1174.798 kb on - strand, within B158DRAFT_1135 at 1174.822 kb on + strand, within B158DRAFT_1135 at 1174.926 kb on + strand, within B158DRAFT_1135 at 1174.926 kb on + strand, within B158DRAFT_1135 at 1174.934 kb on - strand, within B158DRAFT_1135 at 1174.934 kb on - strand, within B158DRAFT_1135 at 1174.934 kb on - strand, within B158DRAFT_1135 at 1174.968 kb on + strand, within B158DRAFT_1135 at 1174.969 kb on - strand, within B158DRAFT_1135 at 1174.969 kb on - strand, within B158DRAFT_1135 at 1174.969 kb on - strand, within B158DRAFT_1135 at 1175.026 kb on + strand at 1175.026 kb on + strand at 1175.034 kb on - strand at 1175.035 kb on - strand at 1175.047 kb on + strand at 1175.062 kb on + strand at 1175.091 kb on + strand at 1175.103 kb on + strand at 1175.103 kb on + strand at 1175.110 kb on + strand at 1175.110 kb on + strand at 1175.110 kb on + strand at 1175.111 kb on - strand at 1175.118 kb on - strand at 1175.118 kb on - strand at 1175.118 kb on - strand at 1175.118 kb on - strand at 1175.142 kb on + strand at 1175.148 kb on - strand at 1175.259 kb on + strand at 1175.283 kb on + strand at 1175.459 kb on + strand, within B158DRAFT_1136 at 1175.479 kb on - strand, within B158DRAFT_1136 at 1175.564 kb on - strand, within B158DRAFT_1136 at 1175.564 kb on - strand, within B158DRAFT_1136 at 1175.564 kb on - strand, within B158DRAFT_1136 at 1175.564 kb on - strand, within B158DRAFT_1136 at 1175.565 kb on - strand, within B158DRAFT_1136 at 1175.607 kb on + strand, within B158DRAFT_1136 at 1175.607 kb on + strand, within B158DRAFT_1136 at 1175.607 kb on + strand, within B158DRAFT_1136 at 1175.610 kb on - strand, within B158DRAFT_1136 at 1175.615 kb on - strand, within B158DRAFT_1136 at 1175.615 kb on - strand, within B158DRAFT_1136 at 1175.615 kb on - strand, within B158DRAFT_1136 at 1175.615 kb on - strand, within B158DRAFT_1136 at 1175.627 kb on - strand, within B158DRAFT_1136 at 1175.649 kb on + strand, within B158DRAFT_1136 at 1175.657 kb on - strand, within B158DRAFT_1136 at 1175.682 kb on - strand, within B158DRAFT_1136 at 1175.795 kb on + strand, within B158DRAFT_1136 at 1175.795 kb on + strand, within B158DRAFT_1136 at 1175.795 kb on + strand, within B158DRAFT_1136 at 1175.795 kb on + strand, within B158DRAFT_1136 at 1175.831 kb on + strand, within B158DRAFT_1136 at 1175.831 kb on + strand, within B158DRAFT_1136 at 1175.839 kb on - strand, within B158DRAFT_1136 at 1175.839 kb on - strand, within B158DRAFT_1136 at 1176.060 kb on - strand, within B158DRAFT_1136 at 1176.077 kb on + strand, within B158DRAFT_1136 at 1176.085 kb on - strand, within B158DRAFT_1136 at 1176.116 kb on + strand, within B158DRAFT_1136 at 1176.134 kb on + strand, within B158DRAFT_1136 at 1176.134 kb on + strand, within B158DRAFT_1136 at 1176.142 kb on - strand, within B158DRAFT_1136
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 37C remove 1,172,314 + +0.1 1,172,314 + -0.3 1,172,322 - +0.1 1,172,322 - -0.1 1,172,354 + -0.2 1,172,448 + -0.5 1,172,473 + B158DRAFT_1134 0.10 -0.2 1,172,473 + B158DRAFT_1134 0.10 -0.3 1,172,481 - B158DRAFT_1134 0.12 -0.6 1,172,481 - B158DRAFT_1134 0.12 +0.0 1,172,496 + B158DRAFT_1134 0.15 -0.3 1,172,570 + B158DRAFT_1134 0.28 -0.1 1,172,577 + B158DRAFT_1134 0.29 -0.5 1,172,578 - B158DRAFT_1134 0.30 -0.5 1,172,578 - B158DRAFT_1134 0.30 -0.6 1,172,609 + B158DRAFT_1134 0.35 -0.3 1,172,609 + B158DRAFT_1134 0.35 +0.1 1,172,615 + B158DRAFT_1134 0.36 -0.2 1,172,617 - B158DRAFT_1134 0.37 +0.1 1,172,617 - B158DRAFT_1134 0.37 -0.1 1,172,663 - B158DRAFT_1134 0.45 +0.8 1,172,673 - B158DRAFT_1134 0.47 +0.2 1,172,673 - B158DRAFT_1134 0.47 -0.1 1,172,680 + B158DRAFT_1134 0.48 -0.8 1,172,707 + B158DRAFT_1134 0.53 -0.2 1,172,707 + B158DRAFT_1134 0.53 -0.3 1,172,708 - B158DRAFT_1134 0.53 +0.3 1,172,716 + B158DRAFT_1134 0.55 +0.0 1,172,758 - B158DRAFT_1134 0.63 -0.0 1,172,890 + B158DRAFT_1134 0.87 -0.4 1,172,890 + B158DRAFT_1134 0.87 +0.5 1,172,890 + B158DRAFT_1134 0.87 -0.7 1,172,890 + B158DRAFT_1134 0.87 -0.2 1,172,890 + B158DRAFT_1134 0.87 -0.3 1,172,890 + B158DRAFT_1134 0.87 -0.2 1,172,890 + B158DRAFT_1134 0.87 +0.6 1,172,890 + B158DRAFT_1134 0.87 -0.3 1,172,903 + B158DRAFT_1134 0.89 -0.5 1,172,911 - -1.1 1,173,003 + -0.2 1,173,011 - +0.3 1,173,212 + -0.0 1,173,212 + +0.0 1,173,255 + -0.0 1,173,327 - +0.5 1,173,343 - -0.3 1,173,366 + +0.1 1,173,391 - -0.3 1,173,491 + B158DRAFT_1135 0.13 -0.1 1,173,493 + B158DRAFT_1135 0.13 -0.8 1,173,501 - B158DRAFT_1135 0.14 +0.2 1,173,503 + B158DRAFT_1135 0.14 -0.0 1,173,503 + B158DRAFT_1135 0.14 -0.4 1,173,506 - B158DRAFT_1135 0.14 -0.5 1,173,539 + B158DRAFT_1135 0.16 -0.1 1,173,614 + B158DRAFT_1135 0.19 -0.3 1,173,642 - B158DRAFT_1135 0.21 -0.2 1,173,643 - B158DRAFT_1135 0.21 +0.1 1,173,649 + B158DRAFT_1135 0.21 -0.4 1,173,667 + B158DRAFT_1135 0.22 +0.1 1,173,676 - B158DRAFT_1135 0.23 -0.2 1,173,704 - B158DRAFT_1135 0.24 +0.0 1,173,704 - B158DRAFT_1135 0.24 +0.0 1,173,743 + B158DRAFT_1135 0.26 -0.7 1,173,744 + B158DRAFT_1135 0.26 -0.4 1,173,744 + B158DRAFT_1135 0.26 -0.1 1,173,744 + B158DRAFT_1135 0.26 -0.2 1,173,752 - B158DRAFT_1135 0.26 -0.3 1,173,752 - B158DRAFT_1135 0.26 +0.1 1,173,752 - B158DRAFT_1135 0.26 -1.1 1,173,752 - B158DRAFT_1135 0.26 -0.1 1,173,752 - B158DRAFT_1135 0.26 -0.4 1,173,805 - B158DRAFT_1135 0.29 -0.2 1,173,928 - B158DRAFT_1135 0.35 -0.0 1,174,037 + B158DRAFT_1135 0.41 -0.3 1,174,039 - B158DRAFT_1135 0.41 -0.0 1,174,040 - B158DRAFT_1135 0.41 -0.1 1,174,040 - B158DRAFT_1135 0.41 -0.0 1,174,052 + B158DRAFT_1135 0.42 -0.1 1,174,058 + B158DRAFT_1135 0.42 -0.6 1,174,060 - B158DRAFT_1135 0.42 -0.4 1,174,066 - B158DRAFT_1135 0.43 +0.1 1,174,094 + B158DRAFT_1135 0.44 -0.3 1,174,134 + B158DRAFT_1135 0.46 +0.3 1,174,134 + B158DRAFT_1135 0.46 -0.1 1,174,134 + B158DRAFT_1135 0.46 -0.3 1,174,161 - B158DRAFT_1135 0.47 +0.1 1,174,207 - B158DRAFT_1135 0.50 -0.4 1,174,207 - B158DRAFT_1135 0.50 -0.7 1,174,296 - B158DRAFT_1135 0.54 -0.1 1,174,296 - B158DRAFT_1135 0.54 -0.3 1,174,307 + B158DRAFT_1135 0.55 -0.4 1,174,310 - B158DRAFT_1135 0.55 -0.2 1,174,348 - B158DRAFT_1135 0.57 +0.3 1,174,376 + B158DRAFT_1135 0.58 -0.1 1,174,376 - B158DRAFT_1135 0.58 -0.1 1,174,428 - B158DRAFT_1135 0.61 +0.4 1,174,475 + B158DRAFT_1135 0.63 -0.1 1,174,482 - B158DRAFT_1135 0.64 +0.1 1,174,482 - B158DRAFT_1135 0.64 +0.2 1,174,490 + B158DRAFT_1135 0.64 -0.0 1,174,497 - B158DRAFT_1135 0.65 -0.4 1,174,531 - B158DRAFT_1135 0.66 -0.4 1,174,531 - B158DRAFT_1135 0.66 +0.5 1,174,587 + B158DRAFT_1135 0.69 -0.5 1,174,594 - B158DRAFT_1135 0.70 -0.1 1,174,625 + B158DRAFT_1135 0.71 -0.2 1,174,715 + B158DRAFT_1135 0.76 -0.5 1,174,723 - B158DRAFT_1135 0.76 -0.2 1,174,736 + B158DRAFT_1135 0.77 -0.3 1,174,744 - B158DRAFT_1135 0.77 -0.1 1,174,744 - B158DRAFT_1135 0.77 -0.4 1,174,775 + B158DRAFT_1135 0.79 -0.0 1,174,783 - B158DRAFT_1135 0.79 +0.1 1,174,783 - B158DRAFT_1135 0.79 -0.4 1,174,790 + B158DRAFT_1135 0.80 +0.1 1,174,790 + B158DRAFT_1135 0.80 -0.0 1,174,790 + B158DRAFT_1135 0.80 +0.0 1,174,790 + B158DRAFT_1135 0.80 -0.2 1,174,790 + B158DRAFT_1135 0.80 -0.3 1,174,798 - B158DRAFT_1135 0.80 +0.3 1,174,798 - B158DRAFT_1135 0.80 -0.1 1,174,798 - B158DRAFT_1135 0.80 +0.2 1,174,798 - B158DRAFT_1135 0.80 -0.2 1,174,798 - B158DRAFT_1135 0.80 -0.1 1,174,822 + B158DRAFT_1135 0.81 +0.1 1,174,926 + B158DRAFT_1135 0.87 +0.1 1,174,926 + B158DRAFT_1135 0.87 +0.2 1,174,934 - B158DRAFT_1135 0.87 +1.0 1,174,934 - B158DRAFT_1135 0.87 -0.7 1,174,934 - B158DRAFT_1135 0.87 -0.2 1,174,968 + B158DRAFT_1135 0.89 +0.1 1,174,969 - B158DRAFT_1135 0.89 -0.0 1,174,969 - B158DRAFT_1135 0.89 -0.2 1,174,969 - B158DRAFT_1135 0.89 -0.4 1,175,026 + -0.2 1,175,026 + -0.2 1,175,034 - -0.2 1,175,035 - +0.1 1,175,047 + -0.1 1,175,062 + -0.1 1,175,091 + -0.5 1,175,103 + -0.2 1,175,103 + +0.3 1,175,110 + -0.2 1,175,110 + -0.2 1,175,110 + -0.2 1,175,111 - -0.2 1,175,118 - +0.6 1,175,118 - -0.5 1,175,118 - +0.1 1,175,118 - -0.2 1,175,142 + -0.2 1,175,148 - +0.1 1,175,259 + -1.8 1,175,283 + -1.3 1,175,459 + B158DRAFT_1136 0.16 -0.8 1,175,479 - B158DRAFT_1136 0.18 -1.2 1,175,564 - B158DRAFT_1136 0.26 -2.6 1,175,564 - B158DRAFT_1136 0.26 -5.0 1,175,564 - B158DRAFT_1136 0.26 -2.7 1,175,564 - B158DRAFT_1136 0.26 +0.6 1,175,565 - B158DRAFT_1136 0.26 -0.9 1,175,607 + B158DRAFT_1136 0.30 -1.8 1,175,607 + B158DRAFT_1136 0.30 -2.9 1,175,607 + B158DRAFT_1136 0.30 -3.3 1,175,610 - B158DRAFT_1136 0.30 -3.3 1,175,615 - B158DRAFT_1136 0.31 -1.1 1,175,615 - B158DRAFT_1136 0.31 -0.5 1,175,615 - B158DRAFT_1136 0.31 -2.8 1,175,615 - B158DRAFT_1136 0.31 -0.5 1,175,627 - B158DRAFT_1136 0.32 -1.6 1,175,649 + B158DRAFT_1136 0.34 -2.7 1,175,657 - B158DRAFT_1136 0.35 -1.2 1,175,682 - B158DRAFT_1136 0.37 -1.8 1,175,795 + B158DRAFT_1136 0.49 -2.9 1,175,795 + B158DRAFT_1136 0.49 -0.7 1,175,795 + B158DRAFT_1136 0.49 -1.6 1,175,795 + B158DRAFT_1136 0.49 -2.0 1,175,831 + B158DRAFT_1136 0.52 -2.4 1,175,831 + B158DRAFT_1136 0.52 +0.5 1,175,839 - B158DRAFT_1136 0.53 -0.7 1,175,839 - B158DRAFT_1136 0.53 -2.0 1,176,060 - B158DRAFT_1136 0.75 -2.9 1,176,077 + B158DRAFT_1136 0.76 -2.9 1,176,085 - B158DRAFT_1136 0.77 -1.5 1,176,116 + B158DRAFT_1136 0.80 -2.8 1,176,134 + B158DRAFT_1136 0.82 -0.7 1,176,134 + B158DRAFT_1136 0.82 -1.8 1,176,142 - B158DRAFT_1136 0.83 -1.4
Or see this region's nucleotide sequence