Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_502 and PfGW456L13_503 are separated by 294 nucleotides PfGW456L13_503 and PfGW456L13_504 are separated by 94 nucleotides
PfGW456L13_502 - GTP-binding protein, at 575,910 to 577,415
_502
PfGW456L13_503 - NADH:ubiquinone oxidoreductase subunit 2 (chain N), at 577,710 to 578,345
_503
PfGW456L13_504 - Outer membrane component of tripartite multidrug resistance system, at 578,440 to 579,888
_504
Position (kb) 577
578
579 Strain fitness (log2 ratio) -2
-1
0
1
2 at 576.721 kb on + strand, within PfGW456L13_502 at 576.721 kb on + strand, within PfGW456L13_502 at 576.722 kb on - strand, within PfGW456L13_502 at 576.730 kb on + strand, within PfGW456L13_502 at 576.730 kb on + strand, within PfGW456L13_502 at 576.730 kb on + strand, within PfGW456L13_502 at 576.730 kb on + strand, within PfGW456L13_502 at 576.730 kb on + strand, within PfGW456L13_502 at 576.730 kb on + strand, within PfGW456L13_502 at 576.731 kb on - strand, within PfGW456L13_502 at 576.731 kb on - strand, within PfGW456L13_502 at 576.731 kb on - strand, within PfGW456L13_502 at 576.731 kb on - strand, within PfGW456L13_502 at 576.731 kb on - strand, within PfGW456L13_502 at 576.731 kb on - strand, within PfGW456L13_502 at 576.731 kb on - strand, within PfGW456L13_502 at 576.731 kb on - strand, within PfGW456L13_502 at 576.735 kb on - strand, within PfGW456L13_502 at 576.735 kb on - strand, within PfGW456L13_502 at 576.832 kb on + strand, within PfGW456L13_502 at 576.832 kb on + strand, within PfGW456L13_502 at 576.833 kb on - strand, within PfGW456L13_502 at 576.959 kb on + strand, within PfGW456L13_502 at 576.960 kb on - strand, within PfGW456L13_502 at 576.970 kb on + strand, within PfGW456L13_502 at 576.971 kb on - strand, within PfGW456L13_502 at 577.057 kb on + strand, within PfGW456L13_502 at 577.058 kb on - strand, within PfGW456L13_502 at 577.392 kb on + strand at 577.393 kb on - strand at 577.409 kb on + strand at 577.409 kb on + strand at 577.410 kb on - strand at 577.410 kb on - strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.417 kb on + strand at 577.418 kb on - strand at 577.418 kb on - strand at 577.418 kb on - strand at 577.418 kb on - strand at 577.418 kb on - strand at 577.418 kb on - strand at 577.418 kb on - strand at 577.418 kb on - strand at 577.418 kb on - strand at 577.418 kb on - strand at 577.418 kb on - strand at 577.418 kb on - strand at 577.418 kb on - strand at 577.512 kb on + strand at 577.656 kb on + strand at 577.656 kb on + strand at 577.656 kb on + strand at 577.656 kb on + strand at 577.657 kb on - strand at 577.657 kb on - strand at 577.658 kb on + strand at 577.658 kb on + strand at 577.658 kb on + strand at 577.658 kb on + strand at 577.659 kb on - strand at 577.659 kb on - strand at 577.659 kb on - strand at 577.659 kb on - strand at 577.659 kb on - strand at 577.659 kb on - strand at 577.659 kb on - strand at 577.659 kb on - strand at 577.659 kb on - strand at 577.777 kb on + strand, within PfGW456L13_503 at 577.777 kb on + strand, within PfGW456L13_503 at 577.777 kb on + strand, within PfGW456L13_503 at 577.778 kb on - strand, within PfGW456L13_503 at 577.778 kb on - strand, within PfGW456L13_503 at 577.778 kb on - strand, within PfGW456L13_503 at 577.778 kb on - strand, within PfGW456L13_503 at 577.932 kb on + strand, within PfGW456L13_503 at 578.045 kb on - strand, within PfGW456L13_503 at 578.045 kb on - strand, within PfGW456L13_503 at 578.059 kb on + strand, within PfGW456L13_503 at 578.060 kb on - strand, within PfGW456L13_503 at 578.272 kb on + strand, within PfGW456L13_503 at 578.272 kb on + strand, within PfGW456L13_503 at 578.273 kb on - strand, within PfGW456L13_503 at 578.278 kb on + strand, within PfGW456L13_503 at 578.278 kb on + strand, within PfGW456L13_503 at 578.278 kb on + strand, within PfGW456L13_503 at 578.279 kb on - strand, within PfGW456L13_503 at 578.279 kb on - strand, within PfGW456L13_503 at 578.279 kb on - strand, within PfGW456L13_503 at 578.279 kb on - strand, within PfGW456L13_503 at 578.279 kb on - strand, within PfGW456L13_503 at 578.279 kb on - strand, within PfGW456L13_503 at 578.333 kb on - strand at 578.429 kb on + strand at 578.429 kb on + strand at 578.429 kb on + strand at 578.429 kb on + strand at 578.429 kb on + strand at 578.430 kb on - strand at 578.430 kb on - strand at 578.430 kb on - strand at 578.430 kb on - strand at 578.430 kb on - strand at 578.570 kb on + strand at 578.570 kb on + strand at 578.570 kb on + strand at 578.570 kb on + strand at 578.570 kb on + strand at 578.570 kb on + strand at 578.570 kb on + strand at 578.571 kb on - strand at 578.571 kb on - strand at 578.571 kb on - strand at 578.571 kb on - strand at 578.571 kb on - strand at 578.571 kb on - strand at 578.571 kb on - strand at 578.571 kb on - strand at 578.571 kb on - strand at 578.868 kb on + strand, within PfGW456L13_504 at 578.868 kb on + strand, within PfGW456L13_504 at 578.869 kb on - strand, within PfGW456L13_504 at 579.137 kb on + strand, within PfGW456L13_504 at 579.338 kb on + strand, within PfGW456L13_504
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 576,721 + PfGW456L13_502 0.54 +0.7 576,721 + PfGW456L13_502 0.54 -0.7 576,722 - PfGW456L13_502 0.54 -1.5 576,730 + PfGW456L13_502 0.54 +0.5 576,730 + PfGW456L13_502 0.54 +0.2 576,730 + PfGW456L13_502 0.54 +0.2 576,730 + PfGW456L13_502 0.54 +0.4 576,730 + PfGW456L13_502 0.54 +0.0 576,730 + PfGW456L13_502 0.54 -0.7 576,731 - PfGW456L13_502 0.55 -2.0 576,731 - PfGW456L13_502 0.55 +0.8 576,731 - PfGW456L13_502 0.55 -0.6 576,731 - PfGW456L13_502 0.55 -0.0 576,731 - PfGW456L13_502 0.55 -0.4 576,731 - PfGW456L13_502 0.55 +0.2 576,731 - PfGW456L13_502 0.55 -0.2 576,731 - PfGW456L13_502 0.55 +0.9 576,735 - PfGW456L13_502 0.55 -1.5 576,735 - PfGW456L13_502 0.55 -0.4 576,832 + PfGW456L13_502 0.61 -0.1 576,832 + PfGW456L13_502 0.61 +0.3 576,833 - PfGW456L13_502 0.61 +1.0 576,959 + PfGW456L13_502 0.70 +0.3 576,960 - PfGW456L13_502 0.70 -0.3 576,970 + PfGW456L13_502 0.70 +0.4 576,971 - PfGW456L13_502 0.70 -0.1 577,057 + PfGW456L13_502 0.76 +1.1 577,058 - PfGW456L13_502 0.76 +1.1 577,392 + +0.2 577,393 - -0.5 577,409 + +1.0 577,409 + +1.0 577,410 - -0.0 577,410 - +0.0 577,417 + -2.1 577,417 + +0.2 577,417 + -0.0 577,417 + +0.5 577,417 + -0.6 577,417 + +1.2 577,417 + -0.1 577,417 + -0.8 577,417 + +0.4 577,417 + -0.6 577,417 + -0.5 577,417 + -0.2 577,417 + -0.1 577,417 + -0.5 577,417 + +0.9 577,418 - +0.8 577,418 - -0.1 577,418 - +0.7 577,418 - -0.7 577,418 - -0.0 577,418 - +1.2 577,418 - -0.1 577,418 - +1.9 577,418 - -0.5 577,418 - -0.1 577,418 - +0.3 577,418 - +0.2 577,418 - +0.1 577,512 + +0.2 577,656 + -0.9 577,656 + -0.8 577,656 + +0.7 577,656 + +0.4 577,657 - +0.2 577,657 - +0.3 577,658 + +0.9 577,658 + -0.5 577,658 + +0.6 577,658 + -0.6 577,659 - +1.1 577,659 - -0.1 577,659 - +0.4 577,659 - -0.2 577,659 - +0.4 577,659 - +0.2 577,659 - +0.1 577,659 - -0.1 577,659 - +0.2 577,777 + PfGW456L13_503 0.11 +0.6 577,777 + PfGW456L13_503 0.11 -0.4 577,777 + PfGW456L13_503 0.11 -0.4 577,778 - PfGW456L13_503 0.11 -1.0 577,778 - PfGW456L13_503 0.11 +0.4 577,778 - PfGW456L13_503 0.11 +0.3 577,778 - PfGW456L13_503 0.11 +0.4 577,932 + PfGW456L13_503 0.35 -0.4 578,045 - PfGW456L13_503 0.53 +0.4 578,045 - PfGW456L13_503 0.53 +1.2 578,059 + PfGW456L13_503 0.55 +1.2 578,060 - PfGW456L13_503 0.55 -0.1 578,272 + PfGW456L13_503 0.88 +0.1 578,272 + PfGW456L13_503 0.88 -0.4 578,273 - PfGW456L13_503 0.89 +0.9 578,278 + PfGW456L13_503 0.89 -1.8 578,278 + PfGW456L13_503 0.89 -0.2 578,278 + PfGW456L13_503 0.89 -1.8 578,279 - PfGW456L13_503 0.89 +1.2 578,279 - PfGW456L13_503 0.89 +0.4 578,279 - PfGW456L13_503 0.89 -0.4 578,279 - PfGW456L13_503 0.89 -0.5 578,279 - PfGW456L13_503 0.89 +0.3 578,279 - PfGW456L13_503 0.89 -1.2 578,333 - +1.5 578,429 + -0.6 578,429 + -0.4 578,429 + -0.8 578,429 + +0.1 578,429 + +0.9 578,430 - -0.4 578,430 - -0.7 578,430 - -0.7 578,430 - -0.6 578,430 - -0.8 578,570 + -0.2 578,570 + +1.2 578,570 + -0.1 578,570 + +0.1 578,570 + -0.4 578,570 + +0.2 578,570 + +1.0 578,571 - -0.1 578,571 - +0.0 578,571 - -0.2 578,571 - +0.6 578,571 - -2.1 578,571 - -0.5 578,571 - -0.4 578,571 - -0.9 578,571 - -0.4 578,868 + PfGW456L13_504 0.30 -0.5 578,868 + PfGW456L13_504 0.30 +1.1 578,869 - PfGW456L13_504 0.30 +0.1 579,137 + PfGW456L13_504 0.48 +1.3 579,338 + PfGW456L13_504 0.62 +0.7
Or see this region's nucleotide sequence