Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4714 and PfGW456L13_4715 are separated by 287 nucleotides PfGW456L13_4715 and PfGW456L13_4716 are separated by 32 nucleotides
PfGW456L13_4714 - Na+/H+ antiporter, at 5,253,151 to 5,254,812
_4714
PfGW456L13_4715 - FIG138056: a glutathione-dependent thiol reductase, at 5,255,100 to 5,255,462
_4715
PfGW456L13_4716 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117), at 5,255,495 to 5,256,529
_4716
Position (kb)
5255
5256 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5254.377 kb on + strand, within PfGW456L13_4714 at 5254.377 kb on + strand at 5254.377 kb on + strand, within PfGW456L13_4714 at 5254.377 kb on + strand, within PfGW456L13_4714 at 5254.378 kb on - strand, within PfGW456L13_4714 at 5254.378 kb on - strand, within PfGW456L13_4714 at 5254.484 kb on + strand, within PfGW456L13_4714 at 5254.485 kb on - strand, within PfGW456L13_4714 at 5254.756 kb on + strand at 5254.767 kb on + strand at 5254.767 kb on + strand at 5254.767 kb on + strand at 5254.767 kb on + strand at 5254.768 kb on - strand at 5254.768 kb on - strand at 5254.768 kb on - strand at 5254.769 kb on + strand at 5254.769 kb on + strand at 5254.769 kb on + strand at 5254.770 kb on - strand at 5254.782 kb on + strand at 5254.823 kb on + strand at 5254.824 kb on - strand at 5254.824 kb on - strand at 5254.824 kb on - strand at 5254.824 kb on - strand at 5254.826 kb on + strand at 5254.827 kb on - strand at 5254.834 kb on + strand at 5254.834 kb on + strand at 5254.835 kb on - strand at 5254.843 kb on + strand at 5254.844 kb on - strand at 5254.877 kb on + strand at 5254.877 kb on + strand at 5254.877 kb on + strand at 5254.877 kb on + strand at 5254.877 kb on + strand at 5254.877 kb on + strand at 5254.877 kb on + strand at 5254.877 kb on + strand at 5254.878 kb on - strand at 5254.878 kb on - strand at 5254.878 kb on - strand at 5254.878 kb on - strand at 5254.878 kb on - strand at 5254.878 kb on - strand at 5254.889 kb on + strand at 5254.890 kb on - strand at 5254.931 kb on + strand at 5254.931 kb on + strand at 5254.931 kb on + strand at 5254.932 kb on - strand at 5254.932 kb on - strand at 5254.932 kb on - strand at 5254.933 kb on + strand at 5254.933 kb on + strand at 5254.933 kb on + strand at 5254.933 kb on + strand at 5254.933 kb on + strand at 5254.934 kb on - strand at 5254.934 kb on - strand at 5254.934 kb on - strand at 5254.934 kb on - strand at 5254.934 kb on - strand at 5254.983 kb on + strand at 5254.984 kb on - strand at 5254.984 kb on - strand at 5254.994 kb on + strand at 5254.994 kb on + strand at 5254.994 kb on + strand at 5254.994 kb on + strand at 5254.994 kb on + strand at 5254.995 kb on - strand at 5255.054 kb on + strand at 5255.055 kb on - strand at 5255.055 kb on - strand at 5255.055 kb on - strand at 5255.069 kb on + strand at 5255.069 kb on + strand at 5255.070 kb on - strand at 5255.070 kb on - strand at 5255.073 kb on + strand at 5255.073 kb on + strand at 5255.074 kb on - strand at 5255.211 kb on + strand, within PfGW456L13_4715 at 5255.211 kb on + strand, within PfGW456L13_4715 at 5255.211 kb on + strand, within PfGW456L13_4715 at 5255.212 kb on - strand, within PfGW456L13_4715 at 5255.212 kb on - strand, within PfGW456L13_4715 at 5255.212 kb on - strand, within PfGW456L13_4715 at 5255.212 kb on - strand, within PfGW456L13_4715 at 5255.438 kb on + strand at 5255.438 kb on + strand at 5255.438 kb on + strand at 5255.438 kb on + strand at 5255.439 kb on - strand at 5255.439 kb on - strand at 5255.439 kb on - strand at 5255.442 kb on + strand at 5255.442 kb on + strand at 5255.443 kb on - strand at 5255.443 kb on - strand at 5255.460 kb on + strand at 5255.460 kb on + strand at 5255.460 kb on + strand at 5255.460 kb on + strand at 5255.460 kb on + strand at 5255.461 kb on - strand at 5255.461 kb on - strand at 5255.461 kb on - strand at 5255.461 kb on - strand at 5255.461 kb on - strand at 5255.461 kb on - strand at 5255.503 kb on + strand at 5255.503 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 5,254,377 + PfGW456L13_4714 0.74 +1.2 5,254,377 + +0.4 5,254,377 + PfGW456L13_4714 0.74 +0.9 5,254,377 + PfGW456L13_4714 0.74 +0.7 5,254,378 - PfGW456L13_4714 0.74 -0.0 5,254,378 - PfGW456L13_4714 0.74 -0.1 5,254,484 + PfGW456L13_4714 0.80 +0.4 5,254,485 - PfGW456L13_4714 0.80 -0.6 5,254,756 + -0.4 5,254,767 + +0.4 5,254,767 + -0.0 5,254,767 + -0.4 5,254,767 + +0.7 5,254,768 - +1.0 5,254,768 - -0.4 5,254,768 - +1.1 5,254,769 + -0.7 5,254,769 + -1.3 5,254,769 + +0.1 5,254,770 - -0.0 5,254,782 + -1.2 5,254,823 + -1.6 5,254,824 - +0.7 5,254,824 - -0.6 5,254,824 - +0.1 5,254,824 - -0.1 5,254,826 + +1.5 5,254,827 - +0.6 5,254,834 + +0.0 5,254,834 + +0.8 5,254,835 - -0.2 5,254,843 + +0.1 5,254,844 - -3.1 5,254,877 + -0.1 5,254,877 + -1.8 5,254,877 + -0.6 5,254,877 + +0.1 5,254,877 + +0.4 5,254,877 + -0.2 5,254,877 + -2.6 5,254,877 + +0.7 5,254,878 - +2.8 5,254,878 - -1.4 5,254,878 - -0.3 5,254,878 - -0.7 5,254,878 - +0.4 5,254,878 - -0.2 5,254,889 + -0.8 5,254,890 - -0.0 5,254,931 + -0.7 5,254,931 + -0.3 5,254,931 + -1.1 5,254,932 - +0.9 5,254,932 - +0.3 5,254,932 - -0.7 5,254,933 + -1.7 5,254,933 + +0.2 5,254,933 + -1.4 5,254,933 + -2.1 5,254,933 + +0.4 5,254,934 - +0.1 5,254,934 - -0.3 5,254,934 - +0.4 5,254,934 - +0.1 5,254,934 - -2.1 5,254,983 + -1.1 5,254,984 - +1.3 5,254,984 - +0.8 5,254,994 + -0.3 5,254,994 + -1.1 5,254,994 + -0.4 5,254,994 + -0.4 5,254,994 + -0.0 5,254,995 - -1.1 5,255,054 + -1.3 5,255,055 - +0.4 5,255,055 - -2.0 5,255,055 - +2.2 5,255,069 + -0.4 5,255,069 + -0.1 5,255,070 - -1.0 5,255,070 - +0.3 5,255,073 + +0.3 5,255,073 + +0.3 5,255,074 - +1.0 5,255,211 + PfGW456L13_4715 0.31 -1.7 5,255,211 + PfGW456L13_4715 0.31 +0.1 5,255,211 + PfGW456L13_4715 0.31 -1.2 5,255,212 - PfGW456L13_4715 0.31 -2.3 5,255,212 - PfGW456L13_4715 0.31 -1.5 5,255,212 - PfGW456L13_4715 0.31 +0.2 5,255,212 - PfGW456L13_4715 0.31 -0.8 5,255,438 + +0.2 5,255,438 + -0.3 5,255,438 + -2.4 5,255,438 + -0.0 5,255,439 - +0.0 5,255,439 - -0.2 5,255,439 - +0.8 5,255,442 + -0.4 5,255,442 + -0.2 5,255,443 - +0.0 5,255,443 - -0.8 5,255,460 + +1.0 5,255,460 + -0.6 5,255,460 + -0.6 5,255,460 + -1.3 5,255,460 + -0.3 5,255,461 - -0.8 5,255,461 - -1.0 5,255,461 - +0.1 5,255,461 - +0.1 5,255,461 - -0.4 5,255,461 - -1.4 5,255,503 + -1.1 5,255,503 + -1.1
Or see this region's nucleotide sequence