Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4073 and PfGW456L13_4074 are separated by 208 nucleotides PfGW456L13_4074 and PfGW456L13_4075 are separated by 79 nucleotides PfGW456L13_4075 and PfGW456L13_4076 are separated by 277 nucleotides PfGW456L13_4076 and PfGW456L13_4077 are separated by 67 nucleotides
PfGW456L13_4073 - Butyryl-CoA dehydrogenase (EC 1.3.99.2), at 4,571,434 to 4,572,582
_4073
PfGW456L13_4074 - Recombination protein RecR, at 4,572,791 to 4,573,393
_4074
PfGW456L13_4075 - Putative oxidoreductase YncB, at 4,573,473 to 4,574,504
_4075
PfGW456L13_4076 - FIG000557: hypothetical protein co-occurring with RecR, at 4,574,782 to 4,575,120
_4076
PfGW456L13_4077 - DNA polymerase III subunits gamma and tau (EC 2.7.7.7), at 4,575,188 to 4,577,269
_4077
Position (kb)
4573
4574
4575 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4572.563 kb on + strand at 4572.563 kb on + strand at 4572.563 kb on + strand at 4572.563 kb on + strand at 4572.873 kb on - strand, within PfGW456L13_4074 at 4572.930 kb on + strand, within PfGW456L13_4074 at 4572.930 kb on + strand, within PfGW456L13_4074 at 4572.931 kb on - strand, within PfGW456L13_4074 at 4572.931 kb on - strand, within PfGW456L13_4074 at 4572.931 kb on - strand, within PfGW456L13_4074 at 4572.931 kb on - strand, within PfGW456L13_4074 at 4572.931 kb on - strand, within PfGW456L13_4074 at 4572.931 kb on - strand, within PfGW456L13_4074 at 4572.931 kb on - strand, within PfGW456L13_4074 at 4572.931 kb on - strand, within PfGW456L13_4074 at 4573.086 kb on + strand, within PfGW456L13_4074 at 4573.087 kb on - strand, within PfGW456L13_4074 at 4573.087 kb on - strand, within PfGW456L13_4074 at 4573.119 kb on + strand, within PfGW456L13_4074 at 4573.119 kb on + strand, within PfGW456L13_4074 at 4573.120 kb on - strand, within PfGW456L13_4074 at 4573.120 kb on - strand, within PfGW456L13_4074 at 4573.120 kb on - strand, within PfGW456L13_4074 at 4573.429 kb on + strand at 4573.429 kb on + strand at 4573.429 kb on + strand at 4573.430 kb on - strand at 4573.430 kb on - strand at 4573.430 kb on - strand at 4573.431 kb on + strand at 4573.470 kb on + strand at 4573.470 kb on + strand at 4573.645 kb on + strand, within PfGW456L13_4075 at 4573.645 kb on + strand, within PfGW456L13_4075 at 4573.646 kb on - strand, within PfGW456L13_4075 at 4573.646 kb on - strand, within PfGW456L13_4075 at 4573.750 kb on + strand, within PfGW456L13_4075 at 4573.750 kb on + strand, within PfGW456L13_4075 at 4573.751 kb on - strand, within PfGW456L13_4075 at 4573.751 kb on - strand, within PfGW456L13_4075 at 4573.751 kb on - strand, within PfGW456L13_4075 at 4573.751 kb on - strand, within PfGW456L13_4075 at 4573.751 kb on - strand, within PfGW456L13_4075 at 4573.818 kb on + strand, within PfGW456L13_4075 at 4573.819 kb on - strand, within PfGW456L13_4075 at 4573.819 kb on - strand, within PfGW456L13_4075 at 4573.841 kb on - strand, within PfGW456L13_4075 at 4573.841 kb on - strand, within PfGW456L13_4075 at 4573.843 kb on + strand, within PfGW456L13_4075 at 4573.843 kb on + strand, within PfGW456L13_4075 at 4573.843 kb on + strand, within PfGW456L13_4075 at 4573.843 kb on + strand, within PfGW456L13_4075 at 4573.843 kb on + strand, within PfGW456L13_4075 at 4573.843 kb on + strand, within PfGW456L13_4075 at 4573.843 kb on + strand, within PfGW456L13_4075 at 4573.843 kb on + strand, within PfGW456L13_4075 at 4573.843 kb on + strand, within PfGW456L13_4075 at 4573.843 kb on + strand, within PfGW456L13_4075 at 4573.843 kb on + strand, within PfGW456L13_4075 at 4573.844 kb on - strand, within PfGW456L13_4075 at 4573.844 kb on - strand, within PfGW456L13_4075 at 4573.844 kb on - strand, within PfGW456L13_4075 at 4573.844 kb on - strand, within PfGW456L13_4075 at 4573.844 kb on - strand, within PfGW456L13_4075 at 4573.844 kb on - strand, within PfGW456L13_4075 at 4573.844 kb on - strand, within PfGW456L13_4075 at 4573.844 kb on - strand, within PfGW456L13_4075 at 4573.844 kb on - strand, within PfGW456L13_4075 at 4573.844 kb on - strand, within PfGW456L13_4075 at 4573.844 kb on - strand, within PfGW456L13_4075 at 4573.844 kb on - strand, within PfGW456L13_4075 at 4573.942 kb on + strand, within PfGW456L13_4075 at 4573.943 kb on - strand, within PfGW456L13_4075 at 4574.095 kb on + strand, within PfGW456L13_4075 at 4574.095 kb on + strand, within PfGW456L13_4075 at 4574.095 kb on + strand, within PfGW456L13_4075 at 4574.095 kb on + strand, within PfGW456L13_4075 at 4574.095 kb on + strand, within PfGW456L13_4075 at 4574.095 kb on + strand, within PfGW456L13_4075 at 4574.095 kb on + strand, within PfGW456L13_4075 at 4574.096 kb on - strand, within PfGW456L13_4075 at 4574.096 kb on - strand, within PfGW456L13_4075 at 4574.096 kb on - strand, within PfGW456L13_4075 at 4574.096 kb on - strand, within PfGW456L13_4075 at 4574.114 kb on + strand, within PfGW456L13_4075 at 4574.347 kb on + strand, within PfGW456L13_4075 at 4574.348 kb on - strand, within PfGW456L13_4075 at 4574.423 kb on + strand at 4574.541 kb on + strand at 4574.541 kb on + strand at 4574.541 kb on + strand at 4574.541 kb on + strand at 4574.541 kb on + strand at 4574.541 kb on + strand at 4574.542 kb on - strand at 4574.542 kb on - strand at 4574.565 kb on - strand at 4574.580 kb on + strand at 4574.581 kb on - strand at 4574.581 kb on - strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.704 kb on - strand at 4574.704 kb on - strand at 4574.704 kb on - strand at 4574.704 kb on - strand at 4574.704 kb on - strand at 4574.704 kb on - strand at 4574.704 kb on - strand at 4574.740 kb on - strand at 4574.756 kb on + strand at 4574.757 kb on - strand at 4575.124 kb on - strand at 4575.124 kb on - strand at 4575.138 kb on + strand at 4575.139 kb on - strand at 4575.139 kb on - strand at 4575.148 kb on - strand at 4575.186 kb on + strand at 4575.186 kb on + strand at 4575.187 kb on - strand at 4575.187 kb on - strand at 4575.190 kb on - strand at 4575.190 kb on - strand at 4575.190 kb on - strand at 4575.190 kb on - strand at 4575.190 kb on - strand at 4575.190 kb on - strand at 4575.224 kb on - strand at 4575.224 kb on - strand at 4575.224 kb on - strand at 4575.224 kb on - strand at 4575.224 kb on - strand at 4575.227 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 4,572,563 + -0.3 4,572,563 + -1.1 4,572,563 + +0.6 4,572,563 + -0.3 4,572,873 - PfGW456L13_4074 0.14 -1.0 4,572,930 + PfGW456L13_4074 0.23 -0.1 4,572,930 + PfGW456L13_4074 0.23 +0.8 4,572,931 - PfGW456L13_4074 0.23 +0.6 4,572,931 - PfGW456L13_4074 0.23 +0.5 4,572,931 - PfGW456L13_4074 0.23 -0.8 4,572,931 - PfGW456L13_4074 0.23 +1.0 4,572,931 - PfGW456L13_4074 0.23 -1.7 4,572,931 - PfGW456L13_4074 0.23 -1.3 4,572,931 - PfGW456L13_4074 0.23 +0.1 4,572,931 - PfGW456L13_4074 0.23 -1.8 4,573,086 + PfGW456L13_4074 0.49 -0.2 4,573,087 - PfGW456L13_4074 0.49 +0.3 4,573,087 - PfGW456L13_4074 0.49 -1.2 4,573,119 + PfGW456L13_4074 0.54 +0.9 4,573,119 + PfGW456L13_4074 0.54 -0.4 4,573,120 - PfGW456L13_4074 0.55 -0.6 4,573,120 - PfGW456L13_4074 0.55 +0.5 4,573,120 - PfGW456L13_4074 0.55 -1.7 4,573,429 + -1.0 4,573,429 + -0.5 4,573,429 + +0.4 4,573,430 - +0.4 4,573,430 - -1.2 4,573,430 - +1.3 4,573,431 + +0.3 4,573,470 + +0.7 4,573,470 + +0.1 4,573,645 + PfGW456L13_4075 0.17 +2.0 4,573,645 + PfGW456L13_4075 0.17 -0.1 4,573,646 - PfGW456L13_4075 0.17 +0.6 4,573,646 - PfGW456L13_4075 0.17 -1.4 4,573,750 + PfGW456L13_4075 0.27 +0.8 4,573,750 + PfGW456L13_4075 0.27 -1.0 4,573,751 - PfGW456L13_4075 0.27 +1.1 4,573,751 - PfGW456L13_4075 0.27 +0.5 4,573,751 - PfGW456L13_4075 0.27 -0.1 4,573,751 - PfGW456L13_4075 0.27 +0.0 4,573,751 - PfGW456L13_4075 0.27 +1.4 4,573,818 + PfGW456L13_4075 0.33 -0.2 4,573,819 - PfGW456L13_4075 0.34 +0.9 4,573,819 - PfGW456L13_4075 0.34 -0.2 4,573,841 - PfGW456L13_4075 0.36 +0.3 4,573,841 - PfGW456L13_4075 0.36 -0.1 4,573,843 + PfGW456L13_4075 0.36 -0.2 4,573,843 + PfGW456L13_4075 0.36 +1.2 4,573,843 + PfGW456L13_4075 0.36 -0.6 4,573,843 + PfGW456L13_4075 0.36 -0.6 4,573,843 + PfGW456L13_4075 0.36 +0.1 4,573,843 + PfGW456L13_4075 0.36 +0.1 4,573,843 + PfGW456L13_4075 0.36 +0.1 4,573,843 + PfGW456L13_4075 0.36 -0.2 4,573,843 + PfGW456L13_4075 0.36 +0.2 4,573,843 + PfGW456L13_4075 0.36 -0.5 4,573,843 + PfGW456L13_4075 0.36 +0.3 4,573,844 - PfGW456L13_4075 0.36 -0.4 4,573,844 - PfGW456L13_4075 0.36 -0.2 4,573,844 - PfGW456L13_4075 0.36 +0.9 4,573,844 - PfGW456L13_4075 0.36 +0.2 4,573,844 - PfGW456L13_4075 0.36 +0.3 4,573,844 - PfGW456L13_4075 0.36 -0.6 4,573,844 - PfGW456L13_4075 0.36 +0.5 4,573,844 - PfGW456L13_4075 0.36 -0.9 4,573,844 - PfGW456L13_4075 0.36 +0.2 4,573,844 - PfGW456L13_4075 0.36 -0.7 4,573,844 - PfGW456L13_4075 0.36 +1.0 4,573,844 - PfGW456L13_4075 0.36 +1.2 4,573,942 + PfGW456L13_4075 0.45 +0.4 4,573,943 - PfGW456L13_4075 0.46 -0.3 4,574,095 + PfGW456L13_4075 0.60 +0.1 4,574,095 + PfGW456L13_4075 0.60 +0.5 4,574,095 + PfGW456L13_4075 0.60 -1.5 4,574,095 + PfGW456L13_4075 0.60 +0.2 4,574,095 + PfGW456L13_4075 0.60 +1.3 4,574,095 + PfGW456L13_4075 0.60 -0.2 4,574,095 + PfGW456L13_4075 0.60 -0.1 4,574,096 - PfGW456L13_4075 0.60 -0.3 4,574,096 - PfGW456L13_4075 0.60 +0.9 4,574,096 - PfGW456L13_4075 0.60 +0.6 4,574,096 - PfGW456L13_4075 0.60 +0.9 4,574,114 + PfGW456L13_4075 0.62 -1.3 4,574,347 + PfGW456L13_4075 0.85 +0.7 4,574,348 - PfGW456L13_4075 0.85 -0.0 4,574,423 + -0.7 4,574,541 + +0.3 4,574,541 + +0.7 4,574,541 + -2.2 4,574,541 + +0.2 4,574,541 + -0.6 4,574,541 + +0.2 4,574,542 - -2.0 4,574,542 - +1.3 4,574,565 - -0.6 4,574,580 + +0.4 4,574,581 - +0.7 4,574,581 - +1.9 4,574,703 + +0.7 4,574,703 + +0.3 4,574,703 + +1.2 4,574,703 + -1.3 4,574,703 + +0.4 4,574,703 + +0.1 4,574,703 + +2.3 4,574,703 + -0.4 4,574,703 + +0.7 4,574,703 + +0.4 4,574,703 + -0.2 4,574,704 - -0.8 4,574,704 - +0.6 4,574,704 - -2.5 4,574,704 - -0.2 4,574,704 - +0.4 4,574,704 - -0.4 4,574,704 - +0.9 4,574,740 - +0.1 4,574,756 + +0.8 4,574,757 - +1.2 4,575,124 - -0.0 4,575,124 - +0.5 4,575,138 + +0.7 4,575,139 - +0.6 4,575,139 - +0.4 4,575,148 - -0.9 4,575,186 + +0.9 4,575,186 + +0.5 4,575,187 - -0.7 4,575,187 - -0.1 4,575,190 - +0.0 4,575,190 - -0.3 4,575,190 - -0.6 4,575,190 - -0.2 4,575,190 - -0.3 4,575,190 - -0.4 4,575,224 - -1.9 4,575,224 - -1.7 4,575,224 - -0.9 4,575,224 - -2.3 4,575,224 - -3.6 4,575,227 - -2.7
Or see this region's nucleotide sequence