Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3314 and PfGW456L13_3315 overlap by 8 nucleotides PfGW456L13_3315 and PfGW456L13_3316 are separated by 119 nucleotides
PfGW456L13_3314 - D-galactono-lactonase (EC 3.1.1.-) (from data) , at 3,723,047 to 3,724,216
_3314
PfGW456L13_3315 - FIG00955242: hypothetical protein, at 3,724,209 to 3,724,547
_3315
PfGW456L13_3316 - Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26), at 3,724,667 to 3,726,247
_3316
Position (kb)
3724
3725 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3723.321 kb on + strand, within PfGW456L13_3314 at 3723.322 kb on - strand, within PfGW456L13_3314 at 3723.322 kb on - strand, within PfGW456L13_3314 at 3723.639 kb on + strand, within PfGW456L13_3314 at 3723.639 kb on + strand, within PfGW456L13_3314 at 3723.640 kb on - strand, within PfGW456L13_3314 at 3723.640 kb on - strand, within PfGW456L13_3314 at 3723.640 kb on - strand, within PfGW456L13_3314 at 3723.640 kb on - strand, within PfGW456L13_3314 at 3723.807 kb on + strand, within PfGW456L13_3314 at 3723.808 kb on - strand, within PfGW456L13_3314 at 3723.808 kb on - strand, within PfGW456L13_3314 at 3724.092 kb on + strand, within PfGW456L13_3314 at 3724.093 kb on - strand, within PfGW456L13_3314 at 3724.119 kb on + strand at 3724.141 kb on - strand at 3724.316 kb on + strand, within PfGW456L13_3315 at 3724.316 kb on + strand, within PfGW456L13_3315 at 3724.316 kb on + strand, within PfGW456L13_3315 at 3724.317 kb on - strand, within PfGW456L13_3315 at 3724.540 kb on + strand at 3724.540 kb on + strand at 3724.540 kb on + strand at 3724.540 kb on + strand at 3724.540 kb on + strand at 3724.540 kb on + strand at 3724.541 kb on - strand at 3724.541 kb on - strand at 3724.541 kb on - strand at 3724.564 kb on - strand at 3724.620 kb on + strand at 3724.621 kb on - strand at 3724.669 kb on - strand at 3725.220 kb on + strand, within PfGW456L13_3316 at 3725.221 kb on - strand, within PfGW456L13_3316
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 3,723,321 + PfGW456L13_3314 0.23 +0.6 3,723,322 - PfGW456L13_3314 0.24 -0.6 3,723,322 - PfGW456L13_3314 0.24 -0.1 3,723,639 + PfGW456L13_3314 0.51 -0.1 3,723,639 + PfGW456L13_3314 0.51 +0.1 3,723,640 - PfGW456L13_3314 0.51 -0.6 3,723,640 - PfGW456L13_3314 0.51 -0.0 3,723,640 - PfGW456L13_3314 0.51 +0.2 3,723,640 - PfGW456L13_3314 0.51 +0.2 3,723,807 + PfGW456L13_3314 0.65 -3.0 3,723,808 - PfGW456L13_3314 0.65 +0.1 3,723,808 - PfGW456L13_3314 0.65 +0.5 3,724,092 + PfGW456L13_3314 0.89 -2.4 3,724,093 - PfGW456L13_3314 0.89 +0.3 3,724,119 + -0.3 3,724,141 - +0.1 3,724,316 + PfGW456L13_3315 0.32 -0.7 3,724,316 + PfGW456L13_3315 0.32 -2.1 3,724,316 + PfGW456L13_3315 0.32 -0.7 3,724,317 - PfGW456L13_3315 0.32 -0.3 3,724,540 + +1.8 3,724,540 + -0.3 3,724,540 + +0.2 3,724,540 + -0.2 3,724,540 + +0.3 3,724,540 + -0.5 3,724,541 - -1.1 3,724,541 - +2.3 3,724,541 - +1.7 3,724,564 - +0.8 3,724,620 + -1.0 3,724,621 - -0.3 3,724,669 - +0.7 3,725,220 + PfGW456L13_3316 0.35 +0.9 3,725,221 - PfGW456L13_3316 0.35 -0.0
Or see this region's nucleotide sequence