Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2185 and PfGW456L13_2186 are separated by 13 nucleotides PfGW456L13_2186 and PfGW456L13_2187 are separated by 3 nucleotides
PfGW456L13_2185 - putative colanic acid biosynthesis glycosyl transferase, at 2,395,969 to 2,397,183
_2185
PfGW456L13_2186 - UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-), at 2,397,197 to 2,398,234
_2186
PfGW456L13_2187 - WbjC, at 2,398,238 to 2,399,356
_2187
Position (kb)
2397
2398
2399 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2396.199 kb on + strand, within PfGW456L13_2185 at 2396.200 kb on - strand, within PfGW456L13_2185 at 2396.291 kb on + strand, within PfGW456L13_2185 at 2396.302 kb on - strand, within PfGW456L13_2185 at 2396.350 kb on + strand, within PfGW456L13_2185 at 2396.698 kb on - strand, within PfGW456L13_2185 at 2396.827 kb on + strand, within PfGW456L13_2185 at 2396.828 kb on - strand, within PfGW456L13_2185 at 2396.855 kb on + strand, within PfGW456L13_2185 at 2397.181 kb on + strand at 2397.214 kb on + strand at 2397.256 kb on + strand at 2397.525 kb on + strand, within PfGW456L13_2186 at 2397.540 kb on + strand, within PfGW456L13_2186 at 2397.561 kb on + strand, within PfGW456L13_2186 at 2397.574 kb on + strand, within PfGW456L13_2186 at 2397.612 kb on + strand, within PfGW456L13_2186 at 2397.664 kb on + strand, within PfGW456L13_2186 at 2397.682 kb on + strand, within PfGW456L13_2186 at 2397.756 kb on + strand, within PfGW456L13_2186 at 2397.756 kb on + strand, within PfGW456L13_2186 at 2397.757 kb on - strand, within PfGW456L13_2186 at 2397.831 kb on - strand, within PfGW456L13_2186 at 2397.897 kb on + strand, within PfGW456L13_2186 at 2397.925 kb on + strand, within PfGW456L13_2186 at 2397.925 kb on + strand, within PfGW456L13_2186 at 2398.034 kb on + strand, within PfGW456L13_2186 at 2398.070 kb on + strand, within PfGW456L13_2186
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 2,396,199 + PfGW456L13_2185 0.19 +0.6 2,396,200 - PfGW456L13_2185 0.19 +0.0 2,396,291 + PfGW456L13_2185 0.27 +0.1 2,396,302 - PfGW456L13_2185 0.27 -0.2 2,396,350 + PfGW456L13_2185 0.31 +0.7 2,396,698 - PfGW456L13_2185 0.60 +1.1 2,396,827 + PfGW456L13_2185 0.71 +0.5 2,396,828 - PfGW456L13_2185 0.71 +0.1 2,396,855 + PfGW456L13_2185 0.73 +0.3 2,397,181 + -0.2 2,397,214 + -1.7 2,397,256 + -0.7 2,397,525 + PfGW456L13_2186 0.32 -2.1 2,397,540 + PfGW456L13_2186 0.33 -2.4 2,397,561 + PfGW456L13_2186 0.35 -2.3 2,397,574 + PfGW456L13_2186 0.36 -1.2 2,397,612 + PfGW456L13_2186 0.40 -1.1 2,397,664 + PfGW456L13_2186 0.45 -1.2 2,397,682 + PfGW456L13_2186 0.47 +0.3 2,397,756 + PfGW456L13_2186 0.54 -0.2 2,397,756 + PfGW456L13_2186 0.54 -2.5 2,397,757 - PfGW456L13_2186 0.54 -0.9 2,397,831 - PfGW456L13_2186 0.61 -1.6 2,397,897 + PfGW456L13_2186 0.67 -2.6 2,397,925 + PfGW456L13_2186 0.70 -3.5 2,397,925 + PfGW456L13_2186 0.70 -2.5 2,398,034 + PfGW456L13_2186 0.81 -3.1 2,398,070 + PfGW456L13_2186 0.84 -1.8
Or see this region's nucleotide sequence