Strain Fitness in Pseudomonas putida KT2440 around PP_2793

Experiment: 1-Pentanol 0.3 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-Pentanol 0.3 vol%
3,181,560	+		PP_2791	0.67	-0.9
3,181,771	-		PP_2791	0.85	+1.3
3,181,861	+				-1.5
3,181,861	+				+1.0
3,181,862	-				+1.8
3,182,318	+				-0.4
3,182,617	-		PP_2793	0.24	+1.3
3,183,009	+		PP_2793	0.57	+1.5
3,183,056	-		PP_2793	0.61	-1.2
3,183,439	+				+0.1
3,183,439	+				+0.4
3,183,820	+		PP_2794	0.40	-0.4
3,183,988	-		PP_2794	0.62	+0.4
3,184,084	-		PP_2794	0.74	-0.3
3,184,278	+				-0.2
3,184,297	-				-0.8
3,184,315	+				+2.0
3,184,319	+				-0.3
3,184,319	+				-0.1
3,184,320	-				-0.7
3,184,320	-				-0.1
3,184,320	-				-0.4
3,184,320	-				-1.9
3,184,320	-				-0.7
3,184,320	-				+0.8
3,184,320	-				-0.4
3,184,320	-				+0.1
3,184,320	-				-1.2
3,184,460	+				-0.2
3,184,484	+				+0.1
3,184,485	-				-0.1