Strain Fitness in Pseudomonas putida KT2440 around PP_1342
Experiment: 1-Pentanol 0.3 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 1-Pentanol 0.3 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 1,528,920 | + | +0.6 | |||
| 1,528,935 | + | +0.2 | |||
| 1,528,941 | + | -1.6 | |||
| 1,528,954 | + | -0.5 | |||
| 1,528,964 | + | +0.3 | |||
| 1,530,229 | + | -1.1 | |||
| 1,530,229 | + | -1.1 | |||
| 1,530,229 | + | -1.4 | |||
| 1,530,229 | + | -2.1 | |||
| 1,530,251 | + | -0.3 |
Or see this region's nucleotide sequence