Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2138 and B158DRAFT_2139 are separated by 89 nucleotides B158DRAFT_2139 and B158DRAFT_2140 are separated by 30 nucleotides
B158DRAFT_2138: B158DRAFT_2138 - type IV-A pilus assembly ATPase PilB, at 271,815 to 273,527
_2138
B158DRAFT_2139: B158DRAFT_2139 - Type II secretory pathway, component PulF, at 273,617 to 274,867
_2139
B158DRAFT_2140: B158DRAFT_2140 - type 4 prepilin peptidase 1 (EC:3.4.23.43). Aspartic peptidase. MEROPS family A24A, at 274,898 to 275,806
_2140
Position (kb) 273
274
275 Strain fitness (log2 ratio) -1
0
1
2 at 272.643 kb on + strand, within B158DRAFT_2138 at 272.785 kb on - strand, within B158DRAFT_2138 at 272.791 kb on - strand, within B158DRAFT_2138 at 272.792 kb on + strand, within B158DRAFT_2138 at 272.792 kb on - strand, within B158DRAFT_2138 at 272.892 kb on - strand, within B158DRAFT_2138 at 272.914 kb on + strand, within B158DRAFT_2138 at 272.914 kb on + strand, within B158DRAFT_2138 at 272.914 kb on + strand, within B158DRAFT_2138 at 272.914 kb on + strand, within B158DRAFT_2138 at 272.922 kb on - strand, within B158DRAFT_2138 at 272.922 kb on - strand, within B158DRAFT_2138 at 272.922 kb on - strand, within B158DRAFT_2138 at 272.922 kb on - strand, within B158DRAFT_2138 at 272.922 kb on - strand, within B158DRAFT_2138 at 272.922 kb on - strand, within B158DRAFT_2138 at 272.922 kb on - strand, within B158DRAFT_2138 at 272.932 kb on - strand, within B158DRAFT_2138 at 272.932 kb on - strand, within B158DRAFT_2138 at 272.946 kb on + strand, within B158DRAFT_2138 at 273.052 kb on - strand, within B158DRAFT_2138 at 273.097 kb on - strand, within B158DRAFT_2138 at 273.117 kb on - strand, within B158DRAFT_2138 at 273.136 kb on - strand, within B158DRAFT_2138 at 273.255 kb on + strand, within B158DRAFT_2138 at 273.333 kb on + strand, within B158DRAFT_2138 at 273.457 kb on + strand at 273.483 kb on + strand at 273.521 kb on + strand at 273.521 kb on + strand at 273.529 kb on - strand at 273.637 kb on - strand at 273.784 kb on + strand, within B158DRAFT_2139 at 273.950 kb on + strand, within B158DRAFT_2139 at 274.032 kb on + strand, within B158DRAFT_2139 at 274.083 kb on - strand, within B158DRAFT_2139 at 274.141 kb on - strand, within B158DRAFT_2139 at 274.141 kb on - strand, within B158DRAFT_2139 at 274.157 kb on + strand, within B158DRAFT_2139 at 274.162 kb on + strand, within B158DRAFT_2139 at 274.281 kb on + strand, within B158DRAFT_2139 at 274.355 kb on + strand, within B158DRAFT_2139 at 274.511 kb on + strand, within B158DRAFT_2139 at 274.561 kb on + strand, within B158DRAFT_2139 at 274.684 kb on - strand, within B158DRAFT_2139 at 274.690 kb on - strand, within B158DRAFT_2139 at 274.826 kb on + strand at 274.831 kb on + strand at 275.296 kb on + strand, within B158DRAFT_2140 at 275.296 kb on + strand, within B158DRAFT_2140 at 275.304 kb on - strand, within B158DRAFT_2140 at 275.750 kb on + strand at 275.847 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 272,643 + B158DRAFT_2138 0.48 +1.7 272,785 - B158DRAFT_2138 0.57 +1.3 272,791 - B158DRAFT_2138 0.57 +1.4 272,792 + B158DRAFT_2138 0.57 +1.5 272,792 - B158DRAFT_2138 0.57 +1.2 272,892 - B158DRAFT_2138 0.63 +1.4 272,914 + B158DRAFT_2138 0.64 +1.4 272,914 + B158DRAFT_2138 0.64 +1.1 272,914 + B158DRAFT_2138 0.64 +1.5 272,914 + B158DRAFT_2138 0.64 +1.5 272,922 - B158DRAFT_2138 0.65 +1.6 272,922 - B158DRAFT_2138 0.65 +1.1 272,922 - B158DRAFT_2138 0.65 +1.3 272,922 - B158DRAFT_2138 0.65 +1.4 272,922 - B158DRAFT_2138 0.65 +1.1 272,922 - B158DRAFT_2138 0.65 +1.4 272,922 - B158DRAFT_2138 0.65 +1.9 272,932 - B158DRAFT_2138 0.65 +1.4 272,932 - B158DRAFT_2138 0.65 +1.3 272,946 + B158DRAFT_2138 0.66 +1.8 273,052 - B158DRAFT_2138 0.72 +1.7 273,097 - B158DRAFT_2138 0.75 +1.8 273,117 - B158DRAFT_2138 0.76 +1.2 273,136 - B158DRAFT_2138 0.77 +1.6 273,255 + B158DRAFT_2138 0.84 +1.3 273,333 + B158DRAFT_2138 0.89 +1.4 273,457 + +1.7 273,483 + +1.5 273,521 + +0.0 273,521 + +2.6 273,529 - +1.3 273,637 - +1.3 273,784 + B158DRAFT_2139 0.13 +0.0 273,950 + B158DRAFT_2139 0.27 +1.5 274,032 + B158DRAFT_2139 0.33 +1.7 274,083 - B158DRAFT_2139 0.37 +0.7 274,141 - B158DRAFT_2139 0.42 +0.5 274,141 - B158DRAFT_2139 0.42 +1.0 274,157 + B158DRAFT_2139 0.43 +1.4 274,162 + B158DRAFT_2139 0.44 +1.9 274,281 + B158DRAFT_2139 0.53 +1.7 274,355 + B158DRAFT_2139 0.59 +1.7 274,511 + B158DRAFT_2139 0.71 +1.5 274,561 + B158DRAFT_2139 0.75 +1.7 274,684 - B158DRAFT_2139 0.85 +0.5 274,690 - B158DRAFT_2139 0.86 +0.4 274,826 + +1.4 274,831 + +0.8 275,296 + B158DRAFT_2140 0.44 -0.5 275,296 + B158DRAFT_2140 0.44 +0.5 275,304 - B158DRAFT_2140 0.45 +0.8 275,750 + -0.1 275,847 + -0.2
Or see this region's nucleotide sequence