Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1322 and B158DRAFT_1323 are separated by 23 nucleotides B158DRAFT_1323 and B158DRAFT_1324 overlap by 1 nucleotides B158DRAFT_1324 and B158DRAFT_1325 are separated by 55 nucleotides
B158DRAFT_1322: B158DRAFT_1322 - 3-isopropylmalate dehydrogenase (EC 1.1.1.85), at 1,365,842 to 1,366,918
_1322
B158DRAFT_1323: B158DRAFT_1323 - heme ABC exporter, ATP-binding protein CcmA, at 1,366,942 to 1,367,568
_1323
B158DRAFT_1324: B158DRAFT_1324 - heme exporter protein CcmB, at 1,367,568 to 1,368,239
_1324
B158DRAFT_1325: B158DRAFT_1325 - heme exporter protein CcmC, at 1,368,295 to 1,369,068
_1325
Position (kb)
1366
1367
1368 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1365.951 kb on - strand, within B158DRAFT_1322 at 1365.981 kb on + strand, within B158DRAFT_1322 at 1366.000 kb on + strand, within B158DRAFT_1322 at 1366.054 kb on - strand, within B158DRAFT_1322 at 1366.151 kb on + strand, within B158DRAFT_1322 at 1366.178 kb on + strand, within B158DRAFT_1322 at 1366.220 kb on + strand, within B158DRAFT_1322 at 1366.294 kb on + strand, within B158DRAFT_1322 at 1366.496 kb on + strand, within B158DRAFT_1322 at 1366.518 kb on - strand, within B158DRAFT_1322 at 1366.539 kb on + strand, within B158DRAFT_1322 at 1366.539 kb on + strand, within B158DRAFT_1322 at 1366.549 kb on - strand, within B158DRAFT_1322 at 1366.657 kb on + strand, within B158DRAFT_1322 at 1366.657 kb on + strand, within B158DRAFT_1322 at 1366.657 kb on + strand, within B158DRAFT_1322 at 1366.657 kb on + strand, within B158DRAFT_1322 at 1366.663 kb on + strand, within B158DRAFT_1322 at 1366.663 kb on + strand, within B158DRAFT_1322 at 1366.663 kb on + strand, within B158DRAFT_1322 at 1366.665 kb on - strand, within B158DRAFT_1322 at 1366.679 kb on + strand, within B158DRAFT_1322 at 1366.679 kb on + strand, within B158DRAFT_1322 at 1366.679 kb on + strand, within B158DRAFT_1322 at 1366.679 kb on + strand, within B158DRAFT_1322 at 1366.714 kb on - strand, within B158DRAFT_1322 at 1366.719 kb on - strand, within B158DRAFT_1322 at 1366.731 kb on + strand, within B158DRAFT_1322 at 1366.846 kb on + strand at 1366.846 kb on + strand at 1366.846 kb on + strand at 1366.846 kb on + strand at 1366.846 kb on + strand at 1366.846 kb on + strand at 1366.854 kb on - strand at 1366.854 kb on - strand at 1366.969 kb on + strand at 1366.969 kb on + strand at 1367.014 kb on + strand, within B158DRAFT_1323 at 1367.068 kb on + strand, within B158DRAFT_1323 at 1367.076 kb on - strand, within B158DRAFT_1323 at 1367.111 kb on - strand, within B158DRAFT_1323 at 1367.271 kb on + strand, within B158DRAFT_1323 at 1367.296 kb on + strand, within B158DRAFT_1323 at 1367.296 kb on + strand, within B158DRAFT_1323 at 1367.304 kb on - strand, within B158DRAFT_1323 at 1367.327 kb on - strand, within B158DRAFT_1323 at 1367.369 kb on - strand, within B158DRAFT_1323 at 1367.495 kb on + strand, within B158DRAFT_1323 at 1367.562 kb on + strand at 1367.582 kb on + strand at 1367.582 kb on + strand at 1367.678 kb on + strand, within B158DRAFT_1324 at 1367.683 kb on + strand, within B158DRAFT_1324 at 1367.691 kb on - strand, within B158DRAFT_1324 at 1367.691 kb on - strand, within B158DRAFT_1324 at 1367.736 kb on + strand, within B158DRAFT_1324 at 1367.736 kb on + strand, within B158DRAFT_1324 at 1367.741 kb on + strand, within B158DRAFT_1324 at 1367.741 kb on + strand, within B158DRAFT_1324 at 1367.741 kb on + strand, within B158DRAFT_1324 at 1367.749 kb on - strand, within B158DRAFT_1324 at 1367.810 kb on - strand, within B158DRAFT_1324 at 1367.810 kb on - strand, within B158DRAFT_1324 at 1367.975 kb on + strand, within B158DRAFT_1324 at 1367.983 kb on - strand, within B158DRAFT_1324 at 1367.986 kb on + strand, within B158DRAFT_1324 at 1367.986 kb on - strand, within B158DRAFT_1324 at 1367.986 kb on - strand, within B158DRAFT_1324 at 1368.023 kb on - strand, within B158DRAFT_1324 at 1368.198 kb on - strand at 1368.414 kb on + strand, within B158DRAFT_1325 at 1368.422 kb on - strand, within B158DRAFT_1325 at 1368.448 kb on + strand, within B158DRAFT_1325
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 1,365,951 - B158DRAFT_1322 0.10 +0.2 1,365,981 + B158DRAFT_1322 0.13 +1.5 1,366,000 + B158DRAFT_1322 0.15 -0.2 1,366,054 - B158DRAFT_1322 0.20 +1.5 1,366,151 + B158DRAFT_1322 0.29 -0.7 1,366,178 + B158DRAFT_1322 0.31 -2.0 1,366,220 + B158DRAFT_1322 0.35 -1.8 1,366,294 + B158DRAFT_1322 0.42 -1.0 1,366,496 + B158DRAFT_1322 0.61 -0.5 1,366,518 - B158DRAFT_1322 0.63 +0.5 1,366,539 + B158DRAFT_1322 0.65 -0.7 1,366,539 + B158DRAFT_1322 0.65 +0.3 1,366,549 - B158DRAFT_1322 0.66 +0.2 1,366,657 + B158DRAFT_1322 0.76 -0.7 1,366,657 + B158DRAFT_1322 0.76 -0.5 1,366,657 + B158DRAFT_1322 0.76 +0.2 1,366,657 + B158DRAFT_1322 0.76 -2.3 1,366,663 + B158DRAFT_1322 0.76 -1.8 1,366,663 + B158DRAFT_1322 0.76 -0.1 1,366,663 + B158DRAFT_1322 0.76 -1.4 1,366,665 - B158DRAFT_1322 0.76 +0.9 1,366,679 + B158DRAFT_1322 0.78 -1.6 1,366,679 + B158DRAFT_1322 0.78 -1.0 1,366,679 + B158DRAFT_1322 0.78 -1.0 1,366,679 + B158DRAFT_1322 0.78 -2.7 1,366,714 - B158DRAFT_1322 0.81 +0.5 1,366,719 - B158DRAFT_1322 0.81 -0.1 1,366,731 + B158DRAFT_1322 0.83 -1.4 1,366,846 + +0.2 1,366,846 + -0.7 1,366,846 + -0.1 1,366,846 + -1.1 1,366,846 + -1.0 1,366,846 + -0.5 1,366,854 - +1.5 1,366,854 - +0.5 1,366,969 + -0.9 1,366,969 + -1.0 1,367,014 + B158DRAFT_1323 0.11 -2.1 1,367,068 + B158DRAFT_1323 0.20 +0.9 1,367,076 - B158DRAFT_1323 0.21 -0.7 1,367,111 - B158DRAFT_1323 0.27 -0.4 1,367,271 + B158DRAFT_1323 0.52 -0.2 1,367,296 + B158DRAFT_1323 0.56 -0.5 1,367,296 + B158DRAFT_1323 0.56 -0.8 1,367,304 - B158DRAFT_1323 0.58 -1.3 1,367,327 - B158DRAFT_1323 0.61 -0.8 1,367,369 - B158DRAFT_1323 0.68 -0.9 1,367,495 + B158DRAFT_1323 0.88 -2.8 1,367,562 + +0.9 1,367,582 + -0.9 1,367,582 + -0.4 1,367,678 + B158DRAFT_1324 0.16 -1.8 1,367,683 + B158DRAFT_1324 0.17 -2.4 1,367,691 - B158DRAFT_1324 0.18 +0.2 1,367,691 - B158DRAFT_1324 0.18 -0.5 1,367,736 + B158DRAFT_1324 0.25 -0.8 1,367,736 + B158DRAFT_1324 0.25 -1.5 1,367,741 + B158DRAFT_1324 0.26 -1.8 1,367,741 + B158DRAFT_1324 0.26 -1.0 1,367,741 + B158DRAFT_1324 0.26 -0.4 1,367,749 - B158DRAFT_1324 0.27 -0.2 1,367,810 - B158DRAFT_1324 0.36 -0.7 1,367,810 - B158DRAFT_1324 0.36 -1.8 1,367,975 + B158DRAFT_1324 0.61 -1.3 1,367,983 - B158DRAFT_1324 0.62 -1.0 1,367,986 + B158DRAFT_1324 0.62 -2.1 1,367,986 - B158DRAFT_1324 0.62 +0.3 1,367,986 - B158DRAFT_1324 0.62 -0.2 1,368,023 - B158DRAFT_1324 0.68 -1.0 1,368,198 - +0.0 1,368,414 + B158DRAFT_1325 0.15 -0.2 1,368,422 - B158DRAFT_1325 0.16 +0.1 1,368,448 + B158DRAFT_1325 0.20 +1.5
Or see this region's nucleotide sequence