Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1292

Experiment: m.b. 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1290 and B158DRAFT_1291 are separated by 64 nucleotidesB158DRAFT_1291 and B158DRAFT_1292 are separated by 47 nucleotidesB158DRAFT_1292 and B158DRAFT_1293 are separated by 17 nucleotidesB158DRAFT_1293 and B158DRAFT_1294 are separated by 93 nucleotides B158DRAFT_1290: B158DRAFT_1290 - Predicted protease with the C-terminal PDZ domain, at 1,334,095 to 1,335,924 _1290 B158DRAFT_1291: B158DRAFT_1291 - exodeoxyribonuclease III, at 1,335,989 to 1,336,804 _1291 B158DRAFT_1292: B158DRAFT_1292 - hypothetical protein, at 1,336,852 to 1,340,016 _1292 B158DRAFT_1293: B158DRAFT_1293 - 6-pyruvoyl-tetrahydropterin synthase, at 1,340,034 to 1,340,885 _1293 B158DRAFT_1294: B158DRAFT_1294 - Sugar kinases, ribokinase family, at 1,340,979 to 1,341,986 _1294 Position (kb) 1336 1337 1338 1339 1340 1341Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1336.034 kb on + strandat 1336.042 kb on - strandat 1336.116 kb on + strand, within B158DRAFT_1291at 1336.116 kb on + strand, within B158DRAFT_1291at 1336.198 kb on + strand, within B158DRAFT_1291at 1336.449 kb on + strand, within B158DRAFT_1291at 1336.449 kb on + strand, within B158DRAFT_1291at 1336.596 kb on - strand, within B158DRAFT_1291at 1336.620 kb on + strand, within B158DRAFT_1291at 1336.696 kb on - strand, within B158DRAFT_1291at 1336.705 kb on + strand, within B158DRAFT_1291at 1336.706 kb on - strand, within B158DRAFT_1291at 1336.713 kb on - strand, within B158DRAFT_1291at 1336.810 kb on + strandat 1336.880 kb on - strandat 1336.892 kb on - strandat 1337.000 kb on + strandat 1337.008 kb on - strandat 1337.093 kb on + strandat 1337.101 kb on - strandat 1337.133 kb on + strandat 1337.133 kb on + strandat 1337.133 kb on + strandat 1337.133 kb on + strandat 1337.133 kb on + strandat 1337.141 kb on - strandat 1337.141 kb on - strandat 1337.228 kb on + strand, within B158DRAFT_1292at 1337.231 kb on - strand, within B158DRAFT_1292at 1337.231 kb on - strand, within B158DRAFT_1292at 1337.510 kb on + strand, within B158DRAFT_1292at 1337.518 kb on - strand, within B158DRAFT_1292at 1337.544 kb on + strand, within B158DRAFT_1292at 1337.601 kb on - strand, within B158DRAFT_1292at 1337.603 kb on + strand, within B158DRAFT_1292at 1337.685 kb on + strand, within B158DRAFT_1292at 1337.716 kb on + strand, within B158DRAFT_1292at 1337.853 kb on + strand, within B158DRAFT_1292at 1337.893 kb on + strand, within B158DRAFT_1292at 1337.900 kb on + strand, within B158DRAFT_1292at 1337.956 kb on + strand, within B158DRAFT_1292at 1337.964 kb on - strand, within B158DRAFT_1292at 1337.964 kb on - strand, within B158DRAFT_1292at 1337.964 kb on - strand, within B158DRAFT_1292at 1337.964 kb on - strand, within B158DRAFT_1292at 1337.984 kb on - strand, within B158DRAFT_1292at 1338.354 kb on + strand, within B158DRAFT_1292at 1338.362 kb on - strand, within B158DRAFT_1292at 1338.575 kb on - strand, within B158DRAFT_1292at 1338.607 kb on + strand, within B158DRAFT_1292at 1338.628 kb on + strand, within B158DRAFT_1292at 1338.664 kb on + strand, within B158DRAFT_1292at 1338.664 kb on + strand, within B158DRAFT_1292at 1338.672 kb on - strand, within B158DRAFT_1292at 1338.684 kb on + strand, within B158DRAFT_1292at 1338.855 kb on + strand, within B158DRAFT_1292at 1338.863 kb on - strand, within B158DRAFT_1292at 1338.886 kb on - strand, within B158DRAFT_1292at 1339.080 kb on + strand, within B158DRAFT_1292at 1339.094 kb on + strand, within B158DRAFT_1292at 1339.098 kb on - strand, within B158DRAFT_1292at 1339.229 kb on + strand, within B158DRAFT_1292at 1339.229 kb on + strand, within B158DRAFT_1292at 1339.235 kb on - strand, within B158DRAFT_1292at 1339.248 kb on + strand, within B158DRAFT_1292at 1339.256 kb on - strand, within B158DRAFT_1292at 1339.293 kb on - strand, within B158DRAFT_1292at 1339.328 kb on - strand, within B158DRAFT_1292at 1339.450 kb on + strand, within B158DRAFT_1292at 1339.450 kb on - strand, within B158DRAFT_1292at 1339.477 kb on + strand, within B158DRAFT_1292at 1339.486 kb on + strand, within B158DRAFT_1292at 1339.494 kb on - strand, within B158DRAFT_1292at 1339.523 kb on + strand, within B158DRAFT_1292at 1339.533 kb on + strand, within B158DRAFT_1292at 1339.743 kb on + strandat 1339.751 kb on - strandat 1339.751 kb on - strandat 1339.785 kb on - strandat 1339.793 kb on + strandat 1339.809 kb on + strandat 1339.851 kb on + strandat 1339.856 kb on + strandat 1339.867 kb on + strandat 1339.875 kb on - strandat 1339.895 kb on + strandat 1339.927 kb on + strandat 1339.932 kb on + strandat 1339.932 kb on + strandat 1339.940 kb on - strandat 1339.944 kb on + strandat 1340.032 kb on - strandat 1340.122 kb on + strand, within B158DRAFT_1293at 1340.149 kb on + strand, within B158DRAFT_1293at 1340.149 kb on + strand, within B158DRAFT_1293at 1340.149 kb on + strand, within B158DRAFT_1293at 1340.157 kb on - strand, within B158DRAFT_1293at 1340.162 kb on - strand, within B158DRAFT_1293at 1340.167 kb on - strand, within B158DRAFT_1293at 1340.235 kb on + strand, within B158DRAFT_1293at 1340.243 kb on - strand, within B158DRAFT_1293at 1340.284 kb on - strand, within B158DRAFT_1293at 1340.307 kb on - strand, within B158DRAFT_1293at 1340.311 kb on + strand, within B158DRAFT_1293at 1340.355 kb on + strand, within B158DRAFT_1293at 1340.501 kb on + strand, within B158DRAFT_1293at 1340.501 kb on + strand, within B158DRAFT_1293at 1340.567 kb on + strand, within B158DRAFT_1293at 1340.574 kb on + strand, within B158DRAFT_1293at 1340.575 kb on - strand, within B158DRAFT_1293at 1340.586 kb on + strand, within B158DRAFT_1293at 1340.678 kb on - strand, within B158DRAFT_1293at 1340.755 kb on + strand, within B158DRAFT_1293at 1341.000 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 30C
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1,336,034 + +0.5
1,336,042 - +0.2
1,336,116 + B158DRAFT_1291 0.16 +0.5
1,336,116 + B158DRAFT_1291 0.16 -0.5
1,336,198 + B158DRAFT_1291 0.26 -2.0
1,336,449 + B158DRAFT_1291 0.56 -0.7
1,336,449 + B158DRAFT_1291 0.56 -0.5
1,336,596 - B158DRAFT_1291 0.74 -1.5
1,336,620 + B158DRAFT_1291 0.77 -0.5
1,336,696 - B158DRAFT_1291 0.87 -0.5
1,336,705 + B158DRAFT_1291 0.88 -2.0
1,336,706 - B158DRAFT_1291 0.88 -0.3
1,336,713 - B158DRAFT_1291 0.89 +2.5
1,336,810 + -0.2
1,336,880 - -0.4
1,336,892 - -0.2
1,337,000 + -0.1
1,337,008 - -0.4
1,337,093 + -0.1
1,337,101 - -0.1
1,337,133 + +0.1
1,337,133 + +0.1
1,337,133 + +0.1
1,337,133 + -0.1
1,337,133 + -0.3
1,337,141 - -0.3
1,337,141 - -0.6
1,337,228 + B158DRAFT_1292 0.12 -0.0
1,337,231 - B158DRAFT_1292 0.12 -0.4
1,337,231 - B158DRAFT_1292 0.12 -0.1
1,337,510 + B158DRAFT_1292 0.21 -0.4
1,337,518 - B158DRAFT_1292 0.21 +0.1
1,337,544 + B158DRAFT_1292 0.22 -0.1
1,337,601 - B158DRAFT_1292 0.24 -0.7
1,337,603 + B158DRAFT_1292 0.24 -0.2
1,337,685 + B158DRAFT_1292 0.26 -0.4
1,337,716 + B158DRAFT_1292 0.27 +0.1
1,337,853 + B158DRAFT_1292 0.32 +0.3
1,337,893 + B158DRAFT_1292 0.33 +0.2
1,337,900 + B158DRAFT_1292 0.33 +0.1
1,337,956 + B158DRAFT_1292 0.35 -0.1
1,337,964 - B158DRAFT_1292 0.35 +0.1
1,337,964 - B158DRAFT_1292 0.35 -0.3
1,337,964 - B158DRAFT_1292 0.35 -0.3
1,337,964 - B158DRAFT_1292 0.35 -0.4
1,337,984 - B158DRAFT_1292 0.36 -2.9
1,338,354 + B158DRAFT_1292 0.47 +0.2
1,338,362 - B158DRAFT_1292 0.48 -0.5
1,338,575 - B158DRAFT_1292 0.54 -0.3
1,338,607 + B158DRAFT_1292 0.55 -0.3
1,338,628 + B158DRAFT_1292 0.56 -0.1
1,338,664 + B158DRAFT_1292 0.57 -0.6
1,338,664 + B158DRAFT_1292 0.57 -0.3
1,338,672 - B158DRAFT_1292 0.58 -0.0
1,338,684 + B158DRAFT_1292 0.58 +0.6
1,338,855 + B158DRAFT_1292 0.63 +0.1
1,338,863 - B158DRAFT_1292 0.64 -0.2
1,338,886 - B158DRAFT_1292 0.64 +0.6
1,339,080 + B158DRAFT_1292 0.70 -0.2
1,339,094 + B158DRAFT_1292 0.71 -0.4
1,339,098 - B158DRAFT_1292 0.71 +0.1
1,339,229 + B158DRAFT_1292 0.75 +0.1
1,339,229 + B158DRAFT_1292 0.75 -0.3
1,339,235 - B158DRAFT_1292 0.75 -0.3
1,339,248 + B158DRAFT_1292 0.76 +0.0
1,339,256 - B158DRAFT_1292 0.76 +0.0
1,339,293 - B158DRAFT_1292 0.77 +0.2
1,339,328 - B158DRAFT_1292 0.78 -0.1
1,339,450 + B158DRAFT_1292 0.82 -0.5
1,339,450 - B158DRAFT_1292 0.82 -0.3
1,339,477 + B158DRAFT_1292 0.83 -0.3
1,339,486 + B158DRAFT_1292 0.83 -0.6
1,339,494 - B158DRAFT_1292 0.83 +0.0
1,339,523 + B158DRAFT_1292 0.84 +0.3
1,339,533 + B158DRAFT_1292 0.85 -0.3
1,339,743 + -0.3
1,339,751 - -0.2
1,339,751 - +0.3
1,339,785 - -0.1
1,339,793 + -0.1
1,339,809 + -0.4
1,339,851 + +0.1
1,339,856 + +1.3
1,339,867 + +0.2
1,339,875 - -0.4
1,339,895 + +0.4
1,339,927 + -0.1
1,339,932 + -0.0
1,339,932 + -0.3
1,339,940 - -0.3
1,339,944 + +0.4
1,340,032 - +0.2
1,340,122 + B158DRAFT_1293 0.10 -0.4
1,340,149 + B158DRAFT_1293 0.13 -0.1
1,340,149 + B158DRAFT_1293 0.13 -0.2
1,340,149 + B158DRAFT_1293 0.13 +0.2
1,340,157 - B158DRAFT_1293 0.14 -1.0
1,340,162 - B158DRAFT_1293 0.15 -0.9
1,340,167 - B158DRAFT_1293 0.16 -0.7
1,340,235 + B158DRAFT_1293 0.24 -0.6
1,340,243 - B158DRAFT_1293 0.25 +0.7
1,340,284 - B158DRAFT_1293 0.29 +0.1
1,340,307 - B158DRAFT_1293 0.32 +0.6
1,340,311 + B158DRAFT_1293 0.33 +0.1
1,340,355 + B158DRAFT_1293 0.38 +0.1
1,340,501 + B158DRAFT_1293 0.55 -0.3
1,340,501 + B158DRAFT_1293 0.55 +0.4
1,340,567 + B158DRAFT_1293 0.63 -0.4
1,340,574 + B158DRAFT_1293 0.63 -0.2
1,340,575 - B158DRAFT_1293 0.63 -0.6
1,340,586 + B158DRAFT_1293 0.65 +0.1
1,340,678 - B158DRAFT_1293 0.76 +0.8
1,340,755 + B158DRAFT_1293 0.85 +0.2
1,341,000 + +0.1

Or see this region's nucleotide sequence