Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1135

Experiment: m.b. 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1133 and B158DRAFT_1134 are separated by 71 nucleotidesB158DRAFT_1134 and B158DRAFT_1135 are separated by 272 nucleotidesB158DRAFT_1135 and B158DRAFT_1136 are separated by 110 nucleotides B158DRAFT_1133: B158DRAFT_1133 - hypothetical protein, at 1,171,673 to 1,172,344 _1133 B158DRAFT_1134: B158DRAFT_1134 - hypothetical protein, at 1,172,416 to 1,172,961 _1134 B158DRAFT_1135: B158DRAFT_1135 - ATPase components of ABC transporters with duplicated ATPase domains, at 1,173,234 to 1,175,189 _1135 B158DRAFT_1136: B158DRAFT_1136 - Holliday junction DNA helicase subunit RuvB, at 1,175,300 to 1,176,319 _1136 Position (kb) 1173 1174 1175 1176Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1172.314 kb on + strandat 1172.314 kb on + strandat 1172.322 kb on - strandat 1172.322 kb on - strandat 1172.354 kb on + strandat 1172.448 kb on + strandat 1172.473 kb on + strand, within B158DRAFT_1134at 1172.473 kb on + strand, within B158DRAFT_1134at 1172.481 kb on - strand, within B158DRAFT_1134at 1172.481 kb on - strand, within B158DRAFT_1134at 1172.496 kb on + strand, within B158DRAFT_1134at 1172.570 kb on + strand, within B158DRAFT_1134at 1172.577 kb on + strand, within B158DRAFT_1134at 1172.578 kb on - strand, within B158DRAFT_1134at 1172.578 kb on - strand, within B158DRAFT_1134at 1172.609 kb on + strand, within B158DRAFT_1134at 1172.609 kb on + strand, within B158DRAFT_1134at 1172.615 kb on + strand, within B158DRAFT_1134at 1172.617 kb on - strand, within B158DRAFT_1134at 1172.617 kb on - strand, within B158DRAFT_1134at 1172.663 kb on - strand, within B158DRAFT_1134at 1172.673 kb on - strand, within B158DRAFT_1134at 1172.673 kb on - strand, within B158DRAFT_1134at 1172.680 kb on + strand, within B158DRAFT_1134at 1172.707 kb on + strand, within B158DRAFT_1134at 1172.707 kb on + strand, within B158DRAFT_1134at 1172.708 kb on - strand, within B158DRAFT_1134at 1172.716 kb on + strand, within B158DRAFT_1134at 1172.758 kb on - strand, within B158DRAFT_1134at 1172.890 kb on + strand, within B158DRAFT_1134at 1172.890 kb on + strand, within B158DRAFT_1134at 1172.890 kb on + strand, within B158DRAFT_1134at 1172.890 kb on + strand, within B158DRAFT_1134at 1172.890 kb on + strand, within B158DRAFT_1134at 1172.890 kb on + strand, within B158DRAFT_1134at 1172.890 kb on + strand, within B158DRAFT_1134at 1172.890 kb on + strand, within B158DRAFT_1134at 1172.903 kb on + strand, within B158DRAFT_1134at 1172.911 kb on - strandat 1173.003 kb on + strandat 1173.011 kb on - strandat 1173.212 kb on + strandat 1173.212 kb on + strandat 1173.255 kb on + strandat 1173.327 kb on - strandat 1173.343 kb on - strandat 1173.366 kb on + strandat 1173.391 kb on - strandat 1173.491 kb on + strand, within B158DRAFT_1135at 1173.493 kb on + strand, within B158DRAFT_1135at 1173.501 kb on - strand, within B158DRAFT_1135at 1173.503 kb on + strand, within B158DRAFT_1135at 1173.503 kb on + strand, within B158DRAFT_1135at 1173.506 kb on - strand, within B158DRAFT_1135at 1173.539 kb on + strand, within B158DRAFT_1135at 1173.614 kb on + strand, within B158DRAFT_1135at 1173.642 kb on - strand, within B158DRAFT_1135at 1173.643 kb on - strand, within B158DRAFT_1135at 1173.649 kb on + strand, within B158DRAFT_1135at 1173.667 kb on + strand, within B158DRAFT_1135at 1173.676 kb on - strand, within B158DRAFT_1135at 1173.704 kb on - strand, within B158DRAFT_1135at 1173.704 kb on - strand, within B158DRAFT_1135at 1173.743 kb on + strand, within B158DRAFT_1135at 1173.744 kb on + strand, within B158DRAFT_1135at 1173.744 kb on + strand, within B158DRAFT_1135at 1173.744 kb on + strand, within B158DRAFT_1135at 1173.752 kb on - strand, within B158DRAFT_1135at 1173.752 kb on - strand, within B158DRAFT_1135at 1173.752 kb on - strand, within B158DRAFT_1135at 1173.752 kb on - strand, within B158DRAFT_1135at 1173.752 kb on - strand, within B158DRAFT_1135at 1173.805 kb on - strand, within B158DRAFT_1135at 1173.928 kb on - strand, within B158DRAFT_1135at 1174.037 kb on + strand, within B158DRAFT_1135at 1174.039 kb on - strand, within B158DRAFT_1135at 1174.040 kb on - strand, within B158DRAFT_1135at 1174.040 kb on - strand, within B158DRAFT_1135at 1174.052 kb on + strand, within B158DRAFT_1135at 1174.058 kb on + strand, within B158DRAFT_1135at 1174.060 kb on - strand, within B158DRAFT_1135at 1174.066 kb on - strand, within B158DRAFT_1135at 1174.094 kb on + strand, within B158DRAFT_1135at 1174.134 kb on + strand, within B158DRAFT_1135at 1174.134 kb on + strand, within B158DRAFT_1135at 1174.134 kb on + strand, within B158DRAFT_1135at 1174.161 kb on - strand, within B158DRAFT_1135at 1174.207 kb on - strand, within B158DRAFT_1135at 1174.207 kb on - strand, within B158DRAFT_1135at 1174.296 kb on - strand, within B158DRAFT_1135at 1174.296 kb on - strand, within B158DRAFT_1135at 1174.307 kb on + strand, within B158DRAFT_1135at 1174.310 kb on - strand, within B158DRAFT_1135at 1174.348 kb on - strand, within B158DRAFT_1135at 1174.376 kb on + strand, within B158DRAFT_1135at 1174.376 kb on - strand, within B158DRAFT_1135at 1174.428 kb on - strand, within B158DRAFT_1135at 1174.475 kb on + strand, within B158DRAFT_1135at 1174.482 kb on - strand, within B158DRAFT_1135at 1174.482 kb on - strand, within B158DRAFT_1135at 1174.490 kb on + strand, within B158DRAFT_1135at 1174.497 kb on - strand, within B158DRAFT_1135at 1174.531 kb on - strand, within B158DRAFT_1135at 1174.531 kb on - strand, within B158DRAFT_1135at 1174.587 kb on + strand, within B158DRAFT_1135at 1174.594 kb on - strand, within B158DRAFT_1135at 1174.625 kb on + strand, within B158DRAFT_1135at 1174.715 kb on + strand, within B158DRAFT_1135at 1174.723 kb on - strand, within B158DRAFT_1135at 1174.736 kb on + strand, within B158DRAFT_1135at 1174.744 kb on - strand, within B158DRAFT_1135at 1174.744 kb on - strand, within B158DRAFT_1135at 1174.775 kb on + strand, within B158DRAFT_1135at 1174.783 kb on - strand, within B158DRAFT_1135at 1174.783 kb on - strand, within B158DRAFT_1135at 1174.790 kb on + strand, within B158DRAFT_1135at 1174.790 kb on + strand, within B158DRAFT_1135at 1174.790 kb on + strand, within B158DRAFT_1135at 1174.790 kb on + strand, within B158DRAFT_1135at 1174.790 kb on + strand, within B158DRAFT_1135at 1174.798 kb on - strand, within B158DRAFT_1135at 1174.798 kb on - strand, within B158DRAFT_1135at 1174.798 kb on - strand, within B158DRAFT_1135at 1174.798 kb on - strand, within B158DRAFT_1135at 1174.798 kb on - strand, within B158DRAFT_1135at 1174.822 kb on + strand, within B158DRAFT_1135at 1174.926 kb on + strand, within B158DRAFT_1135at 1174.926 kb on + strand, within B158DRAFT_1135at 1174.934 kb on - strand, within B158DRAFT_1135at 1174.934 kb on - strand, within B158DRAFT_1135at 1174.934 kb on - strand, within B158DRAFT_1135at 1174.968 kb on + strand, within B158DRAFT_1135at 1174.969 kb on - strand, within B158DRAFT_1135at 1174.969 kb on - strand, within B158DRAFT_1135at 1174.969 kb on - strand, within B158DRAFT_1135at 1175.026 kb on + strandat 1175.026 kb on + strandat 1175.034 kb on - strandat 1175.035 kb on - strandat 1175.047 kb on + strandat 1175.062 kb on + strandat 1175.091 kb on + strandat 1175.103 kb on + strandat 1175.103 kb on + strandat 1175.110 kb on + strandat 1175.110 kb on + strandat 1175.110 kb on + strandat 1175.111 kb on - strandat 1175.118 kb on - strandat 1175.118 kb on - strandat 1175.118 kb on - strandat 1175.118 kb on - strandat 1175.142 kb on + strandat 1175.148 kb on - strandat 1175.259 kb on + strandat 1175.283 kb on + strandat 1175.459 kb on + strand, within B158DRAFT_1136at 1175.479 kb on - strand, within B158DRAFT_1136at 1175.564 kb on - strand, within B158DRAFT_1136at 1175.564 kb on - strand, within B158DRAFT_1136at 1175.564 kb on - strand, within B158DRAFT_1136at 1175.564 kb on - strand, within B158DRAFT_1136at 1175.565 kb on - strand, within B158DRAFT_1136at 1175.607 kb on + strand, within B158DRAFT_1136at 1175.607 kb on + strand, within B158DRAFT_1136at 1175.607 kb on + strand, within B158DRAFT_1136at 1175.610 kb on - strand, within B158DRAFT_1136at 1175.615 kb on - strand, within B158DRAFT_1136at 1175.615 kb on - strand, within B158DRAFT_1136at 1175.615 kb on - strand, within B158DRAFT_1136at 1175.615 kb on - strand, within B158DRAFT_1136at 1175.627 kb on - strand, within B158DRAFT_1136at 1175.649 kb on + strand, within B158DRAFT_1136at 1175.657 kb on - strand, within B158DRAFT_1136at 1175.682 kb on - strand, within B158DRAFT_1136at 1175.795 kb on + strand, within B158DRAFT_1136at 1175.795 kb on + strand, within B158DRAFT_1136at 1175.795 kb on + strand, within B158DRAFT_1136at 1175.795 kb on + strand, within B158DRAFT_1136at 1175.831 kb on + strand, within B158DRAFT_1136at 1175.831 kb on + strand, within B158DRAFT_1136at 1175.839 kb on - strand, within B158DRAFT_1136at 1175.839 kb on - strand, within B158DRAFT_1136at 1176.060 kb on - strand, within B158DRAFT_1136at 1176.077 kb on + strand, within B158DRAFT_1136at 1176.085 kb on - strand, within B158DRAFT_1136at 1176.116 kb on + strand, within B158DRAFT_1136at 1176.134 kb on + strand, within B158DRAFT_1136at 1176.134 kb on + strand, within B158DRAFT_1136at 1176.142 kb on - strand, within B158DRAFT_1136

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 30C
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1,172,314 + +0.2
1,172,314 + +0.1
1,172,322 - +0.1
1,172,322 - +0.2
1,172,354 + -0.1
1,172,448 + -0.6
1,172,473 + B158DRAFT_1134 0.10 -0.2
1,172,473 + B158DRAFT_1134 0.10 +0.1
1,172,481 - B158DRAFT_1134 0.12 +0.4
1,172,481 - B158DRAFT_1134 0.12 -0.3
1,172,496 + B158DRAFT_1134 0.15 -0.2
1,172,570 + B158DRAFT_1134 0.28 -0.1
1,172,577 + B158DRAFT_1134 0.29 +0.3
1,172,578 - B158DRAFT_1134 0.30 +0.9
1,172,578 - B158DRAFT_1134 0.30 +0.0
1,172,609 + B158DRAFT_1134 0.35 -0.1
1,172,609 + B158DRAFT_1134 0.35 -0.3
1,172,615 + B158DRAFT_1134 0.36 -0.2
1,172,617 - B158DRAFT_1134 0.37 +0.5
1,172,617 - B158DRAFT_1134 0.37 +0.3
1,172,663 - B158DRAFT_1134 0.45 -0.3
1,172,673 - B158DRAFT_1134 0.47 -0.3
1,172,673 - B158DRAFT_1134 0.47 +0.2
1,172,680 + B158DRAFT_1134 0.48 -1.9
1,172,707 + B158DRAFT_1134 0.53 -0.0
1,172,707 + B158DRAFT_1134 0.53 +0.2
1,172,708 - B158DRAFT_1134 0.53 -0.1
1,172,716 + B158DRAFT_1134 0.55 +0.1
1,172,758 - B158DRAFT_1134 0.63 -0.6
1,172,890 + B158DRAFT_1134 0.87 -0.3
1,172,890 + B158DRAFT_1134 0.87 -0.1
1,172,890 + B158DRAFT_1134 0.87 +0.6
1,172,890 + B158DRAFT_1134 0.87 -0.4
1,172,890 + B158DRAFT_1134 0.87 -0.4
1,172,890 + B158DRAFT_1134 0.87 -0.1
1,172,890 + B158DRAFT_1134 0.87 -0.5
1,172,890 + B158DRAFT_1134 0.87 -0.1
1,172,903 + B158DRAFT_1134 0.89 -0.1
1,172,911 - -0.4
1,173,003 + -0.2
1,173,011 - -0.2
1,173,212 + -0.6
1,173,212 + -0.1
1,173,255 + -1.1
1,173,327 - -0.2
1,173,343 - -0.3
1,173,366 + -0.0
1,173,391 - -0.3
1,173,491 + B158DRAFT_1135 0.13 -0.5
1,173,493 + B158DRAFT_1135 0.13 -0.2
1,173,501 - B158DRAFT_1135 0.14 +0.2
1,173,503 + B158DRAFT_1135 0.14 -0.6
1,173,503 + B158DRAFT_1135 0.14 -0.5
1,173,506 - B158DRAFT_1135 0.14 +0.0
1,173,539 + B158DRAFT_1135 0.16 +0.2
1,173,614 + B158DRAFT_1135 0.19 -1.1
1,173,642 - B158DRAFT_1135 0.21 -0.2
1,173,643 - B158DRAFT_1135 0.21 -0.4
1,173,649 + B158DRAFT_1135 0.21 +0.0
1,173,667 + B158DRAFT_1135 0.22 +0.9
1,173,676 - B158DRAFT_1135 0.23 -0.0
1,173,704 - B158DRAFT_1135 0.24 -0.3
1,173,704 - B158DRAFT_1135 0.24 -0.1
1,173,743 + B158DRAFT_1135 0.26 +0.2
1,173,744 + B158DRAFT_1135 0.26 -0.7
1,173,744 + B158DRAFT_1135 0.26 -0.4
1,173,744 + B158DRAFT_1135 0.26 -0.0
1,173,752 - B158DRAFT_1135 0.26 +0.0
1,173,752 - B158DRAFT_1135 0.26 -0.1
1,173,752 - B158DRAFT_1135 0.26 +0.2
1,173,752 - B158DRAFT_1135 0.26 -0.2
1,173,752 - B158DRAFT_1135 0.26 -0.1
1,173,805 - B158DRAFT_1135 0.29 -0.2
1,173,928 - B158DRAFT_1135 0.35 -0.7
1,174,037 + B158DRAFT_1135 0.41 -0.2
1,174,039 - B158DRAFT_1135 0.41 -0.4
1,174,040 - B158DRAFT_1135 0.41 -0.2
1,174,040 - B158DRAFT_1135 0.41 -0.5
1,174,052 + B158DRAFT_1135 0.42 -0.1
1,174,058 + B158DRAFT_1135 0.42 -0.1
1,174,060 - B158DRAFT_1135 0.42 -0.1
1,174,066 - B158DRAFT_1135 0.43 -1.0
1,174,094 + B158DRAFT_1135 0.44 -0.2
1,174,134 + B158DRAFT_1135 0.46 -0.3
1,174,134 + B158DRAFT_1135 0.46 -0.3
1,174,134 + B158DRAFT_1135 0.46 -0.3
1,174,161 - B158DRAFT_1135 0.47 -0.0
1,174,207 - B158DRAFT_1135 0.50 -0.1
1,174,207 - B158DRAFT_1135 0.50 -0.1
1,174,296 - B158DRAFT_1135 0.54 -0.4
1,174,296 - B158DRAFT_1135 0.54 +0.2
1,174,307 + B158DRAFT_1135 0.55 -0.2
1,174,310 - B158DRAFT_1135 0.55 -0.6
1,174,348 - B158DRAFT_1135 0.57 -0.5
1,174,376 + B158DRAFT_1135 0.58 -0.0
1,174,376 - B158DRAFT_1135 0.58 -0.2
1,174,428 - B158DRAFT_1135 0.61 -0.1
1,174,475 + B158DRAFT_1135 0.63 -0.0
1,174,482 - B158DRAFT_1135 0.64 -0.1
1,174,482 - B158DRAFT_1135 0.64 +0.4
1,174,490 + B158DRAFT_1135 0.64 -0.4
1,174,497 - B158DRAFT_1135 0.65 -0.1
1,174,531 - B158DRAFT_1135 0.66 -0.3
1,174,531 - B158DRAFT_1135 0.66 -0.0
1,174,587 + B158DRAFT_1135 0.69 -0.1
1,174,594 - B158DRAFT_1135 0.70 -0.2
1,174,625 + B158DRAFT_1135 0.71 +0.1
1,174,715 + B158DRAFT_1135 0.76 -0.5
1,174,723 - B158DRAFT_1135 0.76 -0.1
1,174,736 + B158DRAFT_1135 0.77 +0.8
1,174,744 - B158DRAFT_1135 0.77 -0.2
1,174,744 - B158DRAFT_1135 0.77 -0.1
1,174,775 + B158DRAFT_1135 0.79 -0.1
1,174,783 - B158DRAFT_1135 0.79 -0.2
1,174,783 - B158DRAFT_1135 0.79 +0.1
1,174,790 + B158DRAFT_1135 0.80 -0.4
1,174,790 + B158DRAFT_1135 0.80 -0.2
1,174,790 + B158DRAFT_1135 0.80 +0.0
1,174,790 + B158DRAFT_1135 0.80 -0.0
1,174,790 + B158DRAFT_1135 0.80 +0.3
1,174,798 - B158DRAFT_1135 0.80 -0.2
1,174,798 - B158DRAFT_1135 0.80 +0.3
1,174,798 - B158DRAFT_1135 0.80 +0.7
1,174,798 - B158DRAFT_1135 0.80 +0.2
1,174,798 - B158DRAFT_1135 0.80 -0.5
1,174,822 + B158DRAFT_1135 0.81 -0.2
1,174,926 + B158DRAFT_1135 0.87 -0.0
1,174,926 + B158DRAFT_1135 0.87 -0.2
1,174,934 - B158DRAFT_1135 0.87 +0.6
1,174,934 - B158DRAFT_1135 0.87 +0.0
1,174,934 - B158DRAFT_1135 0.87 -0.3
1,174,968 + B158DRAFT_1135 0.89 -0.2
1,174,969 - B158DRAFT_1135 0.89 -0.2
1,174,969 - B158DRAFT_1135 0.89 -0.5
1,174,969 - B158DRAFT_1135 0.89 -0.0
1,175,026 + +0.1
1,175,026 + -0.5
1,175,034 - -0.1
1,175,035 - -0.3
1,175,047 + +0.5
1,175,062 + -0.1
1,175,091 + -0.4
1,175,103 + -0.0
1,175,103 + -0.0
1,175,110 + -0.1
1,175,110 + +0.3
1,175,110 + +0.2
1,175,111 - -0.6
1,175,118 - -0.1
1,175,118 - +0.2
1,175,118 - -0.1
1,175,118 - -0.0
1,175,142 + -0.3
1,175,148 - -0.3
1,175,259 + -2.9
1,175,283 + -2.4
1,175,459 + B158DRAFT_1136 0.16 +0.1
1,175,479 - B158DRAFT_1136 0.18 -0.3
1,175,564 - B158DRAFT_1136 0.26 -2.7
1,175,564 - B158DRAFT_1136 0.26 -3.3
1,175,564 - B158DRAFT_1136 0.26 -1.8
1,175,564 - B158DRAFT_1136 0.26 +0.5
1,175,565 - B158DRAFT_1136 0.26 -1.0
1,175,607 + B158DRAFT_1136 0.30 -1.9
1,175,607 + B158DRAFT_1136 0.30 -2.0
1,175,607 + B158DRAFT_1136 0.30 -3.4
1,175,610 - B158DRAFT_1136 0.30 -2.6
1,175,615 - B158DRAFT_1136 0.31 -1.2
1,175,615 - B158DRAFT_1136 0.31 -0.6
1,175,615 - B158DRAFT_1136 0.31 -1.9
1,175,615 - B158DRAFT_1136 0.31 +0.4
1,175,627 - B158DRAFT_1136 0.32 -1.7
1,175,649 + B158DRAFT_1136 0.34 -3.8
1,175,657 - B158DRAFT_1136 0.35 -1.3
1,175,682 - B158DRAFT_1136 0.37 -1.9
1,175,795 + B158DRAFT_1136 0.49 -2.0
1,175,795 + B158DRAFT_1136 0.49 -0.8
1,175,795 + B158DRAFT_1136 0.49 -0.7
1,175,795 + B158DRAFT_1136 0.49 -2.1
1,175,831 + B158DRAFT_1136 0.52 -1.0
1,175,831 + B158DRAFT_1136 0.52 -0.6
1,175,839 - B158DRAFT_1136 0.53 -0.8
1,175,839 - B158DRAFT_1136 0.53 -2.1
1,176,060 - B158DRAFT_1136 0.75 -2.9
1,176,077 + B158DRAFT_1136 0.76 -2.7
1,176,085 - B158DRAFT_1136 0.77 -1.6
1,176,116 + B158DRAFT_1136 0.80 -2.9
1,176,134 + B158DRAFT_1136 0.82 -0.8
1,176,134 + B158DRAFT_1136 0.82 -1.9
1,176,142 - B158DRAFT_1136 0.83 -1.5

Or see this region's nucleotide sequence