Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0670

Experiment: m.b. 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0668 and B158DRAFT_0669 overlap by 20 nucleotidesB158DRAFT_0669 and B158DRAFT_0670 are separated by 13 nucleotidesB158DRAFT_0670 and B158DRAFT_0671 overlap by 8 nucleotidesB158DRAFT_0671 and B158DRAFT_0672 are separated by 18 nucleotides B158DRAFT_0668: B158DRAFT_0668 - Uncharacterized conserved protein, at 671,475 to 672,260 _0668 B158DRAFT_0669: B158DRAFT_0669 - hypothetical protein, at 672,241 to 672,852 _0669 B158DRAFT_0670: B158DRAFT_0670 - Uncharacterized protein required for cytochrome oxidase assembly, at 672,866 to 673,975 _0670 B158DRAFT_0671: B158DRAFT_0671 - protoheme IX farnesyltransferase, at 673,968 to 674,915 _0671 B158DRAFT_0672: B158DRAFT_0672 - Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems, at 674,934 to 675,584 _0672 Position (kb) 672 673 674Strain fitness (log2 ratio) -2 -1 0 1at 671.913 kb on + strand, within B158DRAFT_0668at 671.921 kb on - strand, within B158DRAFT_0668at 671.921 kb on - strand, within B158DRAFT_0668at 671.928 kb on + strand, within B158DRAFT_0668at 671.928 kb on - strand, within B158DRAFT_0668at 671.950 kb on + strand, within B158DRAFT_0668at 672.057 kb on - strand, within B158DRAFT_0668at 672.098 kb on + strand, within B158DRAFT_0668at 672.100 kb on - strand, within B158DRAFT_0668at 672.104 kb on - strand, within B158DRAFT_0668at 672.141 kb on + strand, within B158DRAFT_0668at 672.168 kb on + strand, within B158DRAFT_0668at 672.235 kb on + strandat 672.312 kb on - strand, within B158DRAFT_0669at 672.348 kb on + strand, within B158DRAFT_0669at 672.368 kb on - strand, within B158DRAFT_0669at 672.386 kb on + strand, within B158DRAFT_0669at 672.409 kb on - strand, within B158DRAFT_0669at 672.466 kb on - strand, within B158DRAFT_0669at 672.478 kb on + strand, within B158DRAFT_0669at 672.545 kb on + strand, within B158DRAFT_0669at 672.545 kb on + strand, within B158DRAFT_0669at 672.550 kb on + strand, within B158DRAFT_0669at 672.550 kb on + strand, within B158DRAFT_0669at 672.550 kb on + strand, within B158DRAFT_0669at 672.550 kb on + strand, within B158DRAFT_0669at 672.551 kb on + strand, within B158DRAFT_0669at 672.553 kb on - strand, within B158DRAFT_0669at 672.553 kb on - strand, within B158DRAFT_0669at 672.553 kb on - strand, within B158DRAFT_0669at 672.558 kb on - strand, within B158DRAFT_0669at 672.558 kb on - strand, within B158DRAFT_0669at 672.637 kb on + strand, within B158DRAFT_0669at 672.637 kb on + strand, within B158DRAFT_0669at 672.637 kb on + strand, within B158DRAFT_0669at 672.637 kb on + strand, within B158DRAFT_0669at 672.637 kb on + strand, within B158DRAFT_0669at 672.637 kb on + strand, within B158DRAFT_0669at 672.645 kb on - strand, within B158DRAFT_0669at 672.645 kb on - strand, within B158DRAFT_0669at 672.645 kb on - strand, within B158DRAFT_0669at 672.645 kb on - strand, within B158DRAFT_0669at 672.645 kb on - strand, within B158DRAFT_0669at 672.645 kb on - strand, within B158DRAFT_0669at 672.685 kb on + strand, within B158DRAFT_0669at 672.688 kb on - strand, within B158DRAFT_0669at 672.690 kb on + strand, within B158DRAFT_0669at 672.705 kb on + strand, within B158DRAFT_0669at 672.798 kb on + strandat 672.806 kb on - strandat 672.808 kb on - strandat 672.813 kb on - strandat 672.832 kb on + strandat 672.837 kb on + strandat 672.837 kb on + strandat 672.837 kb on + strandat 672.837 kb on + strandat 672.947 kb on + strandat 672.962 kb on + strandat 672.962 kb on + strandat 672.962 kb on + strandat 672.962 kb on + strandat 672.962 kb on + strandat 672.962 kb on + strandat 672.970 kb on - strandat 672.970 kb on - strandat 672.970 kb on - strandat 672.970 kb on - strandat 672.970 kb on - strandat 672.970 kb on - strandat 672.970 kb on - strandat 672.998 kb on - strand, within B158DRAFT_0670at 673.017 kb on + strand, within B158DRAFT_0670at 673.070 kb on + strand, within B158DRAFT_0670at 673.104 kb on + strand, within B158DRAFT_0670at 673.118 kb on + strand, within B158DRAFT_0670at 673.128 kb on + strand, within B158DRAFT_0670at 673.169 kb on + strand, within B158DRAFT_0670at 673.202 kb on - strand, within B158DRAFT_0670at 673.270 kb on - strand, within B158DRAFT_0670at 673.299 kb on - strand, within B158DRAFT_0670at 673.412 kb on - strand, within B158DRAFT_0670at 673.412 kb on - strand, within B158DRAFT_0670at 673.412 kb on - strand, within B158DRAFT_0670at 673.412 kb on - strand, within B158DRAFT_0670at 673.412 kb on - strand, within B158DRAFT_0670at 673.550 kb on + strand, within B158DRAFT_0670at 673.558 kb on - strand, within B158DRAFT_0670at 673.567 kb on + strand, within B158DRAFT_0670at 673.575 kb on - strand, within B158DRAFT_0670at 673.606 kb on + strand, within B158DRAFT_0670at 673.606 kb on + strand, within B158DRAFT_0670at 673.618 kb on + strand, within B158DRAFT_0670at 673.621 kb on - strand, within B158DRAFT_0670at 673.725 kb on + strand, within B158DRAFT_0670at 673.771 kb on - strand, within B158DRAFT_0670at 673.771 kb on - strand, within B158DRAFT_0670at 673.771 kb on - strand, within B158DRAFT_0670at 673.771 kb on - strand, within B158DRAFT_0670at 673.771 kb on - strand, within B158DRAFT_0670at 673.771 kb on - strand, within B158DRAFT_0670at 673.789 kb on - strand, within B158DRAFT_0670at 673.798 kb on + strand, within B158DRAFT_0670at 673.798 kb on + strand, within B158DRAFT_0670at 673.798 kb on + strand, within B158DRAFT_0670at 673.806 kb on - strand, within B158DRAFT_0670at 673.806 kb on - strand, within B158DRAFT_0670at 673.806 kb on - strand, within B158DRAFT_0670at 673.806 kb on - strand, within B158DRAFT_0670at 673.959 kb on + strandat 674.024 kb on - strandat 674.063 kb on + strand, within B158DRAFT_0671at 674.100 kb on - strand, within B158DRAFT_0671at 674.116 kb on - strand, within B158DRAFT_0671at 674.162 kb on - strand, within B158DRAFT_0671at 674.169 kb on + strand, within B158DRAFT_0671at 674.177 kb on - strand, within B158DRAFT_0671at 674.214 kb on + strand, within B158DRAFT_0671at 674.231 kb on + strand, within B158DRAFT_0671at 674.254 kb on - strand, within B158DRAFT_0671at 674.373 kb on + strand, within B158DRAFT_0671at 674.374 kb on + strand, within B158DRAFT_0671at 674.397 kb on + strand, within B158DRAFT_0671at 674.527 kb on - strand, within B158DRAFT_0671at 674.527 kb on - strand, within B158DRAFT_0671at 674.766 kb on - strand, within B158DRAFT_0671at 674.830 kb on + strandat 674.838 kb on - strandat 674.838 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 30C
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671,913 + B158DRAFT_0668 0.56 +0.4
671,921 - B158DRAFT_0668 0.57 -1.5
671,921 - B158DRAFT_0668 0.57 +0.3
671,928 + B158DRAFT_0668 0.58 -1.7
671,928 - B158DRAFT_0668 0.58 -1.2
671,950 + B158DRAFT_0668 0.60 -0.2
672,057 - B158DRAFT_0668 0.74 -1.2
672,098 + B158DRAFT_0668 0.79 -0.7
672,100 - B158DRAFT_0668 0.80 -0.7
672,104 - B158DRAFT_0668 0.80 -1.6
672,141 + B158DRAFT_0668 0.85 -1.6
672,168 + B158DRAFT_0668 0.88 -0.8
672,235 + -0.5
672,312 - B158DRAFT_0669 0.12 -0.9
672,348 + B158DRAFT_0669 0.17 -0.3
672,368 - B158DRAFT_0669 0.21 -0.4
672,386 + B158DRAFT_0669 0.24 -0.4
672,409 - B158DRAFT_0669 0.27 -0.9
672,466 - B158DRAFT_0669 0.37 -0.9
672,478 + B158DRAFT_0669 0.39 -0.2
672,545 + B158DRAFT_0669 0.50 -0.9
672,545 + B158DRAFT_0669 0.50 -0.9
672,550 + B158DRAFT_0669 0.50 +0.3
672,550 + B158DRAFT_0669 0.50 -2.0
672,550 + B158DRAFT_0669 0.50 -0.3
672,550 + B158DRAFT_0669 0.50 -1.1
672,551 + B158DRAFT_0669 0.51 -0.4
672,553 - B158DRAFT_0669 0.51 -0.5
672,553 - B158DRAFT_0669 0.51 +0.6
672,553 - B158DRAFT_0669 0.51 -0.6
672,558 - B158DRAFT_0669 0.52 -0.7
672,558 - B158DRAFT_0669 0.52 -0.7
672,637 + B158DRAFT_0669 0.65 -0.3
672,637 + B158DRAFT_0669 0.65 -0.3
672,637 + B158DRAFT_0669 0.65 -0.5
672,637 + B158DRAFT_0669 0.65 +0.5
672,637 + B158DRAFT_0669 0.65 -0.7
672,637 + B158DRAFT_0669 0.65 +0.4
672,645 - B158DRAFT_0669 0.66 -0.6
672,645 - B158DRAFT_0669 0.66 -1.0
672,645 - B158DRAFT_0669 0.66 -0.9
672,645 - B158DRAFT_0669 0.66 -1.5
672,645 - B158DRAFT_0669 0.66 -0.1
672,645 - B158DRAFT_0669 0.66 -2.3
672,685 + B158DRAFT_0669 0.73 -0.5
672,688 - B158DRAFT_0669 0.73 -2.3
672,690 + B158DRAFT_0669 0.73 -0.0
672,705 + B158DRAFT_0669 0.76 -0.4
672,798 + -1.1
672,806 - -1.2
672,808 - -0.8
672,813 - -0.8
672,832 + -0.3
672,837 + -0.4
672,837 + -0.5
672,837 + +0.0
672,837 + +0.2
672,947 + -0.2
672,962 + +0.2
672,962 + -0.6
672,962 + +0.1
672,962 + -0.4
672,962 + -0.9
672,962 + +0.6
672,970 - -0.9
672,970 - -0.4
672,970 - -0.2
672,970 - -0.4
672,970 - -1.0
672,970 - -0.8
672,970 - -0.7
672,998 - B158DRAFT_0670 0.12 -0.8
673,017 + B158DRAFT_0670 0.14 -2.5
673,070 + B158DRAFT_0670 0.18 -1.1
673,104 + B158DRAFT_0670 0.21 +0.4
673,118 + B158DRAFT_0670 0.23 -0.8
673,128 + B158DRAFT_0670 0.24 -1.2
673,169 + B158DRAFT_0670 0.27 -0.3
673,202 - B158DRAFT_0670 0.30 -0.9
673,270 - B158DRAFT_0670 0.36 +0.1
673,299 - B158DRAFT_0670 0.39 -0.4
673,412 - B158DRAFT_0670 0.49 +0.0
673,412 - B158DRAFT_0670 0.49 -0.9
673,412 - B158DRAFT_0670 0.49 -0.8
673,412 - B158DRAFT_0670 0.49 -0.7
673,412 - B158DRAFT_0670 0.49 -0.3
673,550 + B158DRAFT_0670 0.62 -1.4
673,558 - B158DRAFT_0670 0.62 -1.6
673,567 + B158DRAFT_0670 0.63 -0.0
673,575 - B158DRAFT_0670 0.64 +0.0
673,606 + B158DRAFT_0670 0.67 -1.8
673,606 + B158DRAFT_0670 0.67 -0.6
673,618 + B158DRAFT_0670 0.68 -0.4
673,621 - B158DRAFT_0670 0.68 -1.4
673,725 + B158DRAFT_0670 0.77 -0.6
673,771 - B158DRAFT_0670 0.82 -0.3
673,771 - B158DRAFT_0670 0.82 -0.4
673,771 - B158DRAFT_0670 0.82 -1.3
673,771 - B158DRAFT_0670 0.82 -0.7
673,771 - B158DRAFT_0670 0.82 -1.3
673,771 - B158DRAFT_0670 0.82 -1.2
673,789 - B158DRAFT_0670 0.83 +0.1
673,798 + B158DRAFT_0670 0.84 -2.2
673,798 + B158DRAFT_0670 0.84 -1.7
673,798 + B158DRAFT_0670 0.84 -2.0
673,806 - B158DRAFT_0670 0.85 -0.5
673,806 - B158DRAFT_0670 0.85 -1.7
673,806 - B158DRAFT_0670 0.85 -0.9
673,806 - B158DRAFT_0670 0.85 -0.9
673,959 + -0.1
674,024 - -0.6
674,063 + B158DRAFT_0671 0.10 +0.2
674,100 - B158DRAFT_0671 0.14 -1.5
674,116 - B158DRAFT_0671 0.16 -0.8
674,162 - B158DRAFT_0671 0.20 +0.0
674,169 + B158DRAFT_0671 0.21 -0.8
674,177 - B158DRAFT_0671 0.22 -1.6
674,214 + B158DRAFT_0671 0.26 -0.6
674,231 + B158DRAFT_0671 0.28 -0.3
674,254 - B158DRAFT_0671 0.30 +0.2
674,373 + B158DRAFT_0671 0.43 -0.8
674,374 + B158DRAFT_0671 0.43 -1.9
674,397 + B158DRAFT_0671 0.45 -1.2
674,527 - B158DRAFT_0671 0.59 -1.3
674,527 - B158DRAFT_0671 0.59 -0.7
674,766 - B158DRAFT_0671 0.84 -1.6
674,830 + -0.5
674,838 - -1.0
674,838 - -0.3

Or see this region's nucleotide sequence