Experiment: 5-Aminolevulinic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu5536 and Atu5537 are separated by 500 nucleotides Atu5537 and Atu5538 overlap by 4 nucleotides Atu5538 and Atu5539 are separated by 225 nucleotides
Atu5536: Atu5536 - amidohydrolase, at 529,906 to 531,645
Atu5536
Atu5537: Atu5537 - mercuric reductase, at 532,146 to 533,507
Atu5537
Atu5538: Atu5538 - hypothetical protein, at 533,504 to 533,965
Atu5538
Atu5539: Atu5539 - HlyD family secretion protein, at 534,191 to 535,066
Atu5539
Position (kb) 532
533
534 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 531.207 kb on + strand, within Atu5536 at 531.220 kb on - strand, within Atu5536 at 531.245 kb on + strand, within Atu5536 at 531.253 kb on - strand, within Atu5536 at 531.329 kb on - strand, within Atu5536 at 531.341 kb on + strand, within Atu5536 at 531.341 kb on + strand, within Atu5536 at 531.432 kb on + strand, within Atu5536 at 531.439 kb on - strand, within Atu5536 at 531.555 kb on + strand at 531.563 kb on - strand at 531.563 kb on - strand at 531.563 kb on - strand at 531.563 kb on - strand at 531.627 kb on + strand at 531.697 kb on + strand at 531.722 kb on - strand at 531.722 kb on - strand at 531.722 kb on - strand at 531.913 kb on + strand at 531.928 kb on + strand at 531.946 kb on - strand at 531.951 kb on - strand at 532.005 kb on - strand at 532.074 kb on - strand at 532.170 kb on - strand at 532.197 kb on - strand at 532.237 kb on + strand at 532.298 kb on + strand, within Atu5537 at 532.329 kb on - strand, within Atu5537 at 532.355 kb on + strand, within Atu5537 at 532.356 kb on + strand, within Atu5537 at 532.364 kb on - strand, within Atu5537 at 532.364 kb on - strand, within Atu5537 at 532.373 kb on - strand, within Atu5537 at 532.399 kb on - strand, within Atu5537 at 532.492 kb on - strand, within Atu5537 at 532.559 kb on - strand, within Atu5537 at 532.583 kb on - strand, within Atu5537 at 532.697 kb on - strand, within Atu5537 at 532.736 kb on + strand, within Atu5537 at 532.736 kb on + strand, within Atu5537 at 532.758 kb on + strand, within Atu5537 at 532.758 kb on + strand, within Atu5537 at 532.791 kb on + strand, within Atu5537 at 532.829 kb on + strand, within Atu5537 at 532.829 kb on + strand, within Atu5537 at 532.845 kb on + strand, within Atu5537 at 532.848 kb on - strand, within Atu5537 at 532.918 kb on + strand, within Atu5537 at 532.926 kb on - strand, within Atu5537 at 532.926 kb on - strand, within Atu5537 at 533.068 kb on + strand, within Atu5537 at 533.074 kb on - strand, within Atu5537 at 533.113 kb on + strand, within Atu5537 at 533.114 kb on - strand, within Atu5537 at 533.116 kb on + strand, within Atu5537 at 533.116 kb on + strand, within Atu5537 at 533.124 kb on - strand, within Atu5537 at 533.124 kb on - strand, within Atu5537 at 533.124 kb on - strand, within Atu5537 at 533.124 kb on - strand, within Atu5537 at 533.124 kb on - strand, within Atu5537 at 533.124 kb on - strand, within Atu5537 at 533.124 kb on - strand, within Atu5537 at 533.137 kb on + strand, within Atu5537 at 533.145 kb on + strand, within Atu5537 at 533.218 kb on - strand, within Atu5537 at 533.241 kb on - strand, within Atu5537 at 533.263 kb on + strand, within Atu5537 at 533.287 kb on + strand, within Atu5537 at 533.311 kb on + strand, within Atu5537 at 533.343 kb on - strand, within Atu5537 at 533.356 kb on - strand, within Atu5537 at 533.373 kb on - strand at 533.474 kb on - strand at 533.491 kb on + strand at 533.509 kb on - strand at 533.583 kb on - strand, within Atu5538 at 533.617 kb on - strand, within Atu5538 at 533.628 kb on + strand, within Atu5538 at 533.660 kb on - strand, within Atu5538 at 533.678 kb on + strand, within Atu5538 at 533.700 kb on + strand, within Atu5538 at 533.701 kb on - strand, within Atu5538 at 533.735 kb on + strand, within Atu5538 at 533.831 kb on - strand, within Atu5538 at 533.886 kb on + strand, within Atu5538 at 533.910 kb on + strand, within Atu5538 at 534.047 kb on + strand at 534.062 kb on - strand at 534.081 kb on + strand at 534.084 kb on - strand at 534.084 kb on - strand at 534.089 kb on - strand at 534.091 kb on + strand at 534.143 kb on + strand at 534.187 kb on - strand at 534.187 kb on - strand at 534.225 kb on - strand at 534.225 kb on - strand at 534.246 kb on - strand at 534.303 kb on - strand, within Atu5539 at 534.308 kb on - strand, within Atu5539 at 534.339 kb on + strand, within Atu5539 at 534.422 kb on - strand, within Atu5539 at 534.422 kb on - strand, within Atu5539 at 534.426 kb on + strand, within Atu5539 at 534.477 kb on - strand, within Atu5539
Per-strain Table
Position Strand Gene LocusTag Fraction 5-Aminolevulinic (N) remove 531,207 + Atu5536 0.75 +0.5 531,220 - Atu5536 0.76 +0.1 531,245 + Atu5536 0.77 +1.4 531,253 - Atu5536 0.77 +1.1 531,329 - Atu5536 0.82 +1.1 531,341 + Atu5536 0.82 -0.1 531,341 + Atu5536 0.82 -1.1 531,432 + Atu5536 0.88 +0.3 531,439 - Atu5536 0.88 -0.5 531,555 + +2.4 531,563 - +1.3 531,563 - +0.0 531,563 - +1.3 531,563 - +4.3 531,627 + +1.6 531,697 + +0.8 531,722 - +0.6 531,722 - +0.2 531,722 - +0.2 531,913 + +0.0 531,928 + +0.0 531,946 - +2.3 531,951 - +0.4 532,005 - -0.9 532,074 - -1.5 532,170 - -0.0 532,197 - +0.8 532,237 + +0.0 532,298 + Atu5537 0.11 +0.9 532,329 - Atu5537 0.13 +1.8 532,355 + Atu5537 0.15 +3.1 532,356 + Atu5537 0.15 -0.1 532,364 - Atu5537 0.16 +1.3 532,364 - Atu5537 0.16 +0.6 532,373 - Atu5537 0.17 +1.0 532,399 - Atu5537 0.19 -0.6 532,492 - Atu5537 0.25 -0.5 532,559 - Atu5537 0.30 +1.0 532,583 - Atu5537 0.32 +0.1 532,697 - Atu5537 0.40 -0.5 532,736 + Atu5537 0.43 +3.0 532,736 + Atu5537 0.43 -0.2 532,758 + Atu5537 0.45 +0.7 532,758 + Atu5537 0.45 -1.2 532,791 + Atu5537 0.47 +0.7 532,829 + Atu5537 0.50 +3.5 532,829 + Atu5537 0.50 +1.8 532,845 + Atu5537 0.51 +2.7 532,848 - Atu5537 0.52 -0.1 532,918 + Atu5537 0.57 +2.3 532,926 - Atu5537 0.57 -0.8 532,926 - Atu5537 0.57 +2.5 533,068 + Atu5537 0.68 -1.7 533,074 - Atu5537 0.68 -1.1 533,113 + Atu5537 0.71 +1.1 533,114 - Atu5537 0.71 +1.2 533,116 + Atu5537 0.71 +1.2 533,116 + Atu5537 0.71 +1.7 533,124 - Atu5537 0.72 +0.6 533,124 - Atu5537 0.72 +1.2 533,124 - Atu5537 0.72 +1.3 533,124 - Atu5537 0.72 +1.6 533,124 - Atu5537 0.72 +1.3 533,124 - Atu5537 0.72 +0.1 533,124 - Atu5537 0.72 +0.4 533,137 + Atu5537 0.73 +1.3 533,145 + Atu5537 0.73 -0.6 533,218 - Atu5537 0.79 +0.3 533,241 - Atu5537 0.80 +1.0 533,263 + Atu5537 0.82 -1.2 533,287 + Atu5537 0.84 +0.0 533,311 + Atu5537 0.86 -0.9 533,343 - Atu5537 0.88 +2.7 533,356 - Atu5537 0.89 +0.8 533,373 - +0.9 533,474 - +0.6 533,491 + +0.6 533,509 - +0.3 533,583 - Atu5538 0.17 +1.4 533,617 - Atu5538 0.24 +0.4 533,628 + Atu5538 0.27 -0.9 533,660 - Atu5538 0.34 -0.7 533,678 + Atu5538 0.38 +1.2 533,700 + Atu5538 0.42 -0.7 533,701 - Atu5538 0.43 +1.9 533,735 + Atu5538 0.50 +2.7 533,831 - Atu5538 0.71 +0.2 533,886 + Atu5538 0.83 -0.1 533,910 + Atu5538 0.88 +0.7 534,047 + +1.4 534,062 - -1.2 534,081 + -1.2 534,084 - -0.5 534,084 - -0.1 534,089 - -0.4 534,091 + -0.2 534,143 + +0.9 534,187 - +2.3 534,187 - +0.5 534,225 - +0.9 534,225 - -0.6 534,246 - +1.4 534,303 - Atu5539 0.13 +2.3 534,308 - Atu5539 0.13 +1.1 534,339 + Atu5539 0.17 +0.5 534,422 - Atu5539 0.26 +2.7 534,422 - Atu5539 0.26 +1.7 534,426 + Atu5539 0.27 +0.3 534,477 - Atu5539 0.33 +1.9
Or see this region's nucleotide sequence