Experiment: 5-Aminolevulinic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu5080 and Atu5081 overlap by 4 nucleotides Atu5081 and Atu5082 are separated by 28 nucleotides
Atu5080: Atu5080 - ABC transporter membrane spanning protein (sugar), at 80,926 to 81,861
Atu5080
Atu5081: Atu5081 - ABC transporter membrane spanning protein (sugar), at 81,858 to 82,736
Atu5081
Atu5082: Atu5082 - hypothetical protein, at 82,765 to 84,528
Atu5082
Position (kb)
80
81
82 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 79.937 kb on + strand at 79.937 kb on + strand at 79.962 kb on + strand at 79.962 kb on + strand at 79.971 kb on - strand at 80.023 kb on + strand at 80.028 kb on + strand at 80.036 kb on - strand at 80.064 kb on + strand at 80.064 kb on + strand at 80.072 kb on - strand at 80.122 kb on + strand at 80.122 kb on + strand at 80.122 kb on + strand at 80.132 kb on + strand at 80.198 kb on + strand at 80.206 kb on - strand at 80.211 kb on - strand at 80.224 kb on - strand at 80.255 kb on - strand at 80.303 kb on + strand at 80.308 kb on + strand at 80.316 kb on - strand at 80.451 kb on + strand at 80.651 kb on + strand at 80.651 kb on + strand at 80.656 kb on + strand at 80.659 kb on - strand at 80.689 kb on + strand at 80.697 kb on - strand at 80.709 kb on + strand at 80.770 kb on - strand at 80.774 kb on + strand at 80.795 kb on - strand at 80.797 kb on + strand at 80.809 kb on + strand at 80.817 kb on - strand at 80.894 kb on - strand at 80.917 kb on - strand at 80.919 kb on - strand at 80.919 kb on - strand at 80.929 kb on - strand at 80.956 kb on + strand at 80.985 kb on + strand at 80.985 kb on + strand at 81.013 kb on - strand at 81.018 kb on - strand at 81.148 kb on + strand, within Atu5080 at 81.203 kb on - strand, within Atu5080 at 81.263 kb on + strand, within Atu5080 at 81.263 kb on + strand, within Atu5080 at 81.271 kb on - strand, within Atu5080 at 81.271 kb on - strand, within Atu5080 at 81.271 kb on - strand, within Atu5080 at 81.347 kb on - strand, within Atu5080 at 81.384 kb on - strand, within Atu5080 at 81.395 kb on + strand, within Atu5080 at 81.442 kb on + strand, within Atu5080 at 81.442 kb on + strand, within Atu5080 at 81.442 kb on + strand, within Atu5080 at 81.770 kb on - strand at 81.808 kb on + strand at 81.816 kb on - strand at 81.820 kb on + strand at 81.820 kb on + strand at 81.820 kb on + strand at 81.828 kb on - strand at 81.839 kb on + strand at 81.867 kb on + strand at 81.875 kb on - strand at 81.949 kb on - strand, within Atu5081 at 82.114 kb on + strand, within Atu5081 at 82.127 kb on - strand, within Atu5081 at 82.212 kb on - strand, within Atu5081 at 82.272 kb on - strand, within Atu5081 at 82.326 kb on + strand, within Atu5081 at 82.326 kb on + strand, within Atu5081 at 82.380 kb on + strand, within Atu5081 at 82.452 kb on + strand, within Atu5081 at 82.452 kb on + strand, within Atu5081 at 82.460 kb on - strand, within Atu5081 at 82.460 kb on - strand, within Atu5081 at 82.475 kb on - strand, within Atu5081 at 82.557 kb on + strand, within Atu5081 at 82.565 kb on - strand, within Atu5081 at 82.565 kb on - strand, within Atu5081 at 82.575 kb on + strand, within Atu5081 at 82.591 kb on - strand, within Atu5081 at 82.651 kb on + strand at 82.669 kb on + strand at 82.669 kb on + strand at 82.669 kb on + strand at 82.677 kb on - strand at 82.719 kb on - strand at 82.733 kb on - strand at 82.792 kb on - strand at 82.801 kb on - strand at 82.815 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 5-Aminolevulinic (N) remove 79,937 + +1.6 79,937 + +1.2 79,962 + +2.7 79,962 + +0.3 79,971 - +0.8 80,023 + -0.0 80,028 + -0.1 80,036 - +1.0 80,064 + -1.9 80,064 + -0.3 80,072 - -0.1 80,122 + +0.7 80,122 + +1.6 80,122 + +0.1 80,132 + +0.8 80,198 + -0.1 80,206 - -0.0 80,211 - +1.3 80,224 - -1.0 80,255 - +0.8 80,303 + +1.4 80,308 + +1.3 80,316 - +0.0 80,451 + +0.3 80,651 + +3.3 80,651 + +0.6 80,656 + -1.0 80,659 - -1.0 80,689 + -0.4 80,697 - +1.2 80,709 + -0.6 80,770 - -0.8 80,774 + +1.5 80,795 - -0.4 80,797 + -1.0 80,809 + +0.7 80,817 - -0.1 80,894 - +0.8 80,917 - -0.8 80,919 - -1.2 80,919 - +0.8 80,929 - +0.9 80,956 + -0.5 80,985 + +2.7 80,985 + -0.3 81,013 - +0.7 81,018 - -0.4 81,148 + Atu5080 0.24 -1.1 81,203 - Atu5080 0.30 -0.1 81,263 + Atu5080 0.36 -0.4 81,263 + Atu5080 0.36 +0.8 81,271 - Atu5080 0.37 +1.7 81,271 - Atu5080 0.37 -0.7 81,271 - Atu5080 0.37 -0.8 81,347 - Atu5080 0.45 +0.3 81,384 - Atu5080 0.49 -0.1 81,395 + Atu5080 0.50 +0.0 81,442 + Atu5080 0.55 +1.4 81,442 + Atu5080 0.55 +0.5 81,442 + Atu5080 0.55 -0.4 81,770 - +2.0 81,808 + -0.8 81,816 - +0.3 81,820 + -0.2 81,820 + -0.9 81,820 + -1.1 81,828 - -0.5 81,839 + +1.2 81,867 + +0.2 81,875 - +0.1 81,949 - Atu5081 0.10 +0.7 82,114 + Atu5081 0.29 +0.0 82,127 - Atu5081 0.31 +1.2 82,212 - Atu5081 0.40 +0.2 82,272 - Atu5081 0.47 +2.3 82,326 + Atu5081 0.53 +1.7 82,326 + Atu5081 0.53 -0.5 82,380 + Atu5081 0.59 -0.2 82,452 + Atu5081 0.68 +2.5 82,452 + Atu5081 0.68 +0.4 82,460 - Atu5081 0.68 +0.1 82,460 - Atu5081 0.68 +0.1 82,475 - Atu5081 0.70 +0.3 82,557 + Atu5081 0.80 +0.2 82,565 - Atu5081 0.80 +0.5 82,565 - Atu5081 0.80 +2.3 82,575 + Atu5081 0.82 -0.6 82,591 - Atu5081 0.83 +1.3 82,651 + -0.1 82,669 + +0.0 82,669 + -0.8 82,669 + +0.1 82,677 - +0.6 82,719 - -0.6 82,733 - -0.3 82,792 - -1.6 82,801 - +1.7 82,815 - +2.2
Or see this region's nucleotide sequence