Experiment: 5-Aminolevulinic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3860 and Atu3861 are separated by 168 nucleotides Atu3861 and Atu3862 are separated by 134 nucleotides Atu3862 and Atu3863 are separated by 41 nucleotides Atu3863 and Atu3864 are separated by 130 nucleotides Atu3864 and Atu3865 are separated by 213 nucleotides
Atu3860: Atu3860 - hypothetical protein, at 948,602 to 950,845
Atu3860
Atu3861: Atu3861 - acyl-CoA hydrolase, at 951,014 to 951,403
Atu3861
Atu3862: Atu3862 - hypothetical protein, at 951,538 to 951,771
Atu3862
Atu3863: Atu3863 - ABC transporter permease, at 951,813 to 953,294
Atu3863
Atu3864: Atu3864 - hypothetical protein, at 953,425 to 953,697
Atu3864
Atu3865: Atu3865 - hypothetical protein, at 953,911 to 957,237
Atu3865
Position (kb) 951
952
953
954 Strain fitness (log2 ratio) -2
-1
0
1
2 at 950.824 kb on + strand at 950.830 kb on + strand at 950.840 kb on + strand at 950.863 kb on + strand at 950.924 kb on + strand at 951.003 kb on + strand at 951.020 kb on - strand at 951.029 kb on - strand at 951.041 kb on - strand at 951.060 kb on - strand, within Atu3861 at 951.089 kb on - strand, within Atu3861 at 951.096 kb on + strand, within Atu3861 at 951.218 kb on + strand, within Atu3861 at 951.244 kb on + strand, within Atu3861 at 951.246 kb on - strand, within Atu3861 at 951.327 kb on - strand, within Atu3861 at 951.438 kb on + strand at 951.451 kb on - strand at 951.451 kb on - strand at 951.490 kb on + strand at 951.498 kb on - strand at 951.569 kb on - strand, within Atu3862 at 951.588 kb on - strand, within Atu3862 at 951.613 kb on - strand, within Atu3862 at 951.677 kb on + strand, within Atu3862 at 951.677 kb on + strand, within Atu3862 at 951.677 kb on + strand, within Atu3862 at 951.677 kb on + strand, within Atu3862 at 951.677 kb on + strand, within Atu3862 at 951.677 kb on + strand, within Atu3862 at 951.685 kb on - strand, within Atu3862 at 951.685 kb on - strand, within Atu3862 at 951.746 kb on - strand, within Atu3862 at 951.778 kb on - strand at 951.786 kb on - strand at 951.790 kb on + strand at 951.790 kb on + strand at 951.798 kb on - strand at 951.798 kb on - strand at 951.812 kb on + strand at 951.852 kb on - strand at 951.927 kb on - strand at 951.964 kb on + strand, within Atu3863 at 952.228 kb on + strand, within Atu3863 at 952.233 kb on - strand, within Atu3863 at 952.241 kb on - strand, within Atu3863 at 952.250 kb on + strand, within Atu3863 at 952.291 kb on - strand, within Atu3863 at 952.331 kb on + strand, within Atu3863 at 952.373 kb on + strand, within Atu3863 at 952.493 kb on - strand, within Atu3863 at 952.617 kb on - strand, within Atu3863 at 952.619 kb on + strand, within Atu3863 at 952.624 kb on + strand, within Atu3863 at 952.624 kb on + strand, within Atu3863 at 952.624 kb on + strand, within Atu3863 at 952.624 kb on + strand, within Atu3863 at 952.627 kb on - strand, within Atu3863 at 952.632 kb on - strand, within Atu3863 at 952.632 kb on - strand, within Atu3863 at 952.729 kb on + strand, within Atu3863 at 952.729 kb on + strand, within Atu3863 at 952.764 kb on + strand, within Atu3863 at 952.799 kb on + strand, within Atu3863 at 952.904 kb on + strand, within Atu3863 at 952.954 kb on + strand, within Atu3863 at 952.960 kb on + strand, within Atu3863 at 952.995 kb on - strand, within Atu3863 at 952.995 kb on - strand, within Atu3863 at 953.026 kb on + strand, within Atu3863 at 953.143 kb on - strand, within Atu3863 at 953.180 kb on + strand at 953.180 kb on + strand at 953.180 kb on + strand at 953.188 kb on - strand at 953.251 kb on + strand at 953.251 kb on + strand at 953.265 kb on - strand at 953.280 kb on + strand at 953.412 kb on - strand at 953.439 kb on - strand at 953.472 kb on - strand, within Atu3864 at 953.515 kb on + strand, within Atu3864 at 953.515 kb on + strand, within Atu3864 at 953.595 kb on - strand, within Atu3864 at 953.595 kb on - strand, within Atu3864 at 953.674 kb on - strand at 953.709 kb on - strand at 953.709 kb on - strand at 953.711 kb on + strand at 953.752 kb on + strand at 953.752 kb on + strand at 953.774 kb on - strand at 953.788 kb on - strand at 953.808 kb on - strand at 953.859 kb on + strand at 953.909 kb on - strand at 953.914 kb on - strand at 953.914 kb on - strand at 953.978 kb on - strand at 954.006 kb on + strand at 954.009 kb on + strand at 954.017 kb on - strand at 954.058 kb on + strand at 954.140 kb on - strand at 954.168 kb on - strand at 954.284 kb on - strand, within Atu3865
Per-strain Table
Position Strand Gene LocusTag Fraction 5-Aminolevulinic (N) remove 950,824 + -1.2 950,830 + -0.0 950,840 + -0.0 950,863 + +0.7 950,924 + -0.2 951,003 + -1.9 951,020 - +1.1 951,029 - -0.0 951,041 - -0.5 951,060 - Atu3861 0.12 -0.5 951,089 - Atu3861 0.19 +0.1 951,096 + Atu3861 0.21 +0.2 951,218 + Atu3861 0.52 +0.0 951,244 + Atu3861 0.59 -0.1 951,246 - Atu3861 0.59 +0.7 951,327 - Atu3861 0.80 -0.3 951,438 + +0.6 951,451 - +0.2 951,451 - -0.2 951,490 + -0.0 951,498 - +0.1 951,569 - Atu3862 0.13 +0.8 951,588 - Atu3862 0.21 +0.9 951,613 - Atu3862 0.32 -0.4 951,677 + Atu3862 0.59 +0.4 951,677 + Atu3862 0.59 +0.2 951,677 + Atu3862 0.59 +0.3 951,677 + Atu3862 0.59 -0.3 951,677 + Atu3862 0.59 +0.2 951,677 + Atu3862 0.59 +0.3 951,685 - Atu3862 0.63 +0.1 951,685 - Atu3862 0.63 -0.8 951,746 - Atu3862 0.89 +0.4 951,778 - +0.0 951,786 - +0.3 951,790 + -0.1 951,790 + -0.0 951,798 - +1.0 951,798 - +0.0 951,812 + -0.0 951,852 - +0.7 951,927 - -0.1 951,964 + Atu3863 0.10 +0.2 952,228 + Atu3863 0.28 -0.6 952,233 - Atu3863 0.28 -1.9 952,241 - Atu3863 0.29 -0.0 952,250 + Atu3863 0.29 +0.7 952,291 - Atu3863 0.32 -0.4 952,331 + Atu3863 0.35 -0.1 952,373 + Atu3863 0.38 -0.0 952,493 - Atu3863 0.46 -0.7 952,617 - Atu3863 0.54 -1.0 952,619 + Atu3863 0.54 -1.9 952,624 + Atu3863 0.55 +0.0 952,624 + Atu3863 0.55 +0.6 952,624 + Atu3863 0.55 -0.2 952,624 + Atu3863 0.55 -0.1 952,627 - Atu3863 0.55 -1.4 952,632 - Atu3863 0.55 -0.2 952,632 - Atu3863 0.55 -0.3 952,729 + Atu3863 0.62 +0.1 952,729 + Atu3863 0.62 -1.2 952,764 + Atu3863 0.64 -1.1 952,799 + Atu3863 0.67 +0.1 952,904 + Atu3863 0.74 -1.1 952,954 + Atu3863 0.77 +0.2 952,960 + Atu3863 0.77 -0.5 952,995 - Atu3863 0.80 -0.5 952,995 - Atu3863 0.80 -0.1 953,026 + Atu3863 0.82 -0.3 953,143 - Atu3863 0.90 -0.1 953,180 + +0.4 953,180 + -0.1 953,180 + +0.0 953,188 - +0.4 953,251 + +0.0 953,251 + +0.4 953,265 - -0.1 953,280 + +0.2 953,412 - +0.5 953,439 - +0.5 953,472 - Atu3864 0.17 -0.7 953,515 + Atu3864 0.33 -0.4 953,515 + Atu3864 0.33 +0.4 953,595 - Atu3864 0.62 +0.5 953,595 - Atu3864 0.62 -0.0 953,674 - +1.0 953,709 - -0.3 953,709 - -0.5 953,711 + -0.0 953,752 + -0.0 953,752 + +1.3 953,774 - +0.4 953,788 - -0.5 953,808 - +0.2 953,859 + +1.5 953,909 - +2.5 953,914 - +0.2 953,914 - -0.5 953,978 - +0.1 954,006 + +0.0 954,009 + +0.4 954,017 - +0.0 954,058 + +0.1 954,140 - -0.0 954,168 - +0.8 954,284 - Atu3865 0.11 +0.0
Or see this region's nucleotide sequence