Experiment: 5-Aminolevulinic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu2825 and Atu2826 overlap by 4 nucleotides Atu2826 and Atu2827 are separated by 116 nucleotides Atu2827 and Atu2828 are separated by 61 nucleotides
Atu2825: Atu2825 - Sun protein, at 2,829,891 to 2,831,276
Atu2825
Atu2826: Atu2826 - protease heat shock protein, at 2,831,273 to 2,832,238
Atu2826
Atu2827: Atu2827 - hypothetical protein, at 2,832,355 to 2,832,567
Atu2827
Atu2828: Atu2828 - chromosome Partitioning Protein, at 2,832,629 to 2,833,510
Atu2828
Position (kb)
2831
2832
2833 Strain fitness (log2 ratio)
-2
-1
0
1 at 2830.382 kb on + strand, within Atu2825 at 2830.382 kb on + strand, within Atu2825 at 2830.390 kb on - strand, within Atu2825 at 2830.455 kb on - strand, within Atu2825 at 2830.478 kb on + strand, within Atu2825 at 2830.556 kb on - strand, within Atu2825 at 2830.651 kb on + strand, within Atu2825 at 2830.654 kb on - strand, within Atu2825 at 2830.654 kb on - strand, within Atu2825 at 2830.660 kb on + strand, within Atu2825 at 2830.795 kb on + strand, within Atu2825 at 2830.807 kb on + strand, within Atu2825 at 2830.905 kb on + strand, within Atu2825 at 2830.928 kb on + strand, within Atu2825 at 2830.951 kb on - strand, within Atu2825 at 2830.958 kb on + strand, within Atu2825 at 2831.022 kb on + strand, within Atu2825 at 2831.032 kb on + strand, within Atu2825 at 2831.032 kb on + strand, within Atu2825 at 2831.068 kb on + strand, within Atu2825 at 2831.102 kb on - strand, within Atu2825 at 2831.277 kb on - strand at 2831.318 kb on - strand at 2831.478 kb on - strand, within Atu2826 at 2831.506 kb on - strand, within Atu2826 at 2831.578 kb on + strand, within Atu2826 at 2831.580 kb on - strand, within Atu2826 at 2831.667 kb on - strand, within Atu2826 at 2831.714 kb on + strand, within Atu2826 at 2831.714 kb on + strand, within Atu2826 at 2831.813 kb on + strand, within Atu2826 at 2831.828 kb on + strand, within Atu2826 at 2831.862 kb on - strand, within Atu2826 at 2831.890 kb on + strand, within Atu2826 at 2832.142 kb on - strand at 2832.191 kb on - strand at 2832.191 kb on - strand at 2832.397 kb on + strand, within Atu2827 at 2832.410 kb on - strand, within Atu2827 at 2832.410 kb on - strand, within Atu2827 at 2832.472 kb on + strand, within Atu2827
Per-strain Table
Position Strand Gene LocusTag Fraction 5-Aminolevulinic (N) remove 2,830,382 + Atu2825 0.35 -1.4 2,830,382 + Atu2825 0.35 -1.0 2,830,390 - Atu2825 0.36 +0.1 2,830,455 - Atu2825 0.41 -0.5 2,830,478 + Atu2825 0.42 -0.9 2,830,556 - Atu2825 0.48 +0.6 2,830,651 + Atu2825 0.55 +0.6 2,830,654 - Atu2825 0.55 -0.5 2,830,654 - Atu2825 0.55 +1.0 2,830,660 + Atu2825 0.55 -0.1 2,830,795 + Atu2825 0.65 -0.0 2,830,807 + Atu2825 0.66 +0.0 2,830,905 + Atu2825 0.73 -0.3 2,830,928 + Atu2825 0.75 +0.1 2,830,951 - Atu2825 0.76 +0.1 2,830,958 + Atu2825 0.77 -0.3 2,831,022 + Atu2825 0.82 +0.4 2,831,032 + Atu2825 0.82 -0.2 2,831,032 + Atu2825 0.82 -0.3 2,831,068 + Atu2825 0.85 -0.1 2,831,102 - Atu2825 0.87 -0.4 2,831,277 - -0.1 2,831,318 - -0.9 2,831,478 - Atu2826 0.21 -1.0 2,831,506 - Atu2826 0.24 -1.9 2,831,578 + Atu2826 0.32 +0.8 2,831,580 - Atu2826 0.32 -1.1 2,831,667 - Atu2826 0.41 -0.2 2,831,714 + Atu2826 0.46 -0.1 2,831,714 + Atu2826 0.46 -0.6 2,831,813 + Atu2826 0.56 +0.3 2,831,828 + Atu2826 0.57 -1.5 2,831,862 - Atu2826 0.61 +0.2 2,831,890 + Atu2826 0.64 +1.6 2,832,142 - -0.2 2,832,191 - +0.4 2,832,191 - +0.1 2,832,397 + Atu2827 0.20 +0.4 2,832,410 - Atu2827 0.26 +0.0 2,832,410 - Atu2827 0.26 +0.1 2,832,472 + Atu2827 0.55 +0.7
Or see this region's nucleotide sequence