Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3141

Experiment: L-Valine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (N)
3,516,888	+		PfGW456L13_3140	0.41	-0.1
3,516,888	+		PfGW456L13_3140	0.41	-0.8
3,516,888	+		PfGW456L13_3140	0.41	-1.0
3,516,888	+		PfGW456L13_3140	0.41	+0.7
3,516,889	-		PfGW456L13_3140	0.41	+0.2
3,516,889	-		PfGW456L13_3140	0.41	-0.1
3,516,889	-		PfGW456L13_3140	0.41	+0.0
3,517,005	+		PfGW456L13_3140	0.50	+0.8
3,517,005	+				+1.7
3,517,005	+		PfGW456L13_3140	0.50	+0.0
3,517,005	+		PfGW456L13_3140	0.50	+0.2
3,517,005	+		PfGW456L13_3140	0.50	+0.0
3,517,005	+		PfGW456L13_3140	0.50	+0.4
3,517,005	+		PfGW456L13_3140	0.50	+0.3
3,517,005	+		PfGW456L13_3140	0.50	-1.6
3,517,005	+		PfGW456L13_3140	0.50	-1.3
3,517,005	+		PfGW456L13_3140	0.50	-0.6
3,517,005	+		PfGW456L13_3140	0.50	-0.3
3,517,005	+		PfGW456L13_3140	0.50	-0.5
3,517,006	-		PfGW456L13_3140	0.50	-0.6
3,517,006	-		PfGW456L13_3140	0.50	-0.5
3,517,006	-		PfGW456L13_3140	0.50	-1.9
3,517,006	-		PfGW456L13_3140	0.50	-0.9
3,517,006	-		PfGW456L13_3140	0.50	+0.6
3,517,006	-		PfGW456L13_3140	0.50	+0.4
3,517,006	-		PfGW456L13_3140	0.50	+0.6
3,517,006	-		PfGW456L13_3140	0.50	-0.4
3,517,006	-		PfGW456L13_3140	0.50	-0.2
3,517,006	-		PfGW456L13_3140	0.50	-0.5
3,517,006	-		PfGW456L13_3140	0.50	+0.7
3,517,008	+		PfGW456L13_3140	0.50	-0.5
3,517,009	-		PfGW456L13_3140	0.50	-0.0
3,517,009	-		PfGW456L13_3140	0.50	+0.4
3,517,026	+		PfGW456L13_3140	0.52	-1.0
3,517,026	+		PfGW456L13_3140	0.52	-1.4
3,517,026	+		PfGW456L13_3140	0.52	+0.7
3,517,026	+		PfGW456L13_3140	0.52	-0.4
3,517,113	+		PfGW456L13_3140	0.58	+2.3
3,517,113	+		PfGW456L13_3140	0.58	-0.7
3,517,113	+		PfGW456L13_3140	0.58	-0.2
3,517,113	+		PfGW456L13_3140	0.58	+0.8
3,517,114	-		PfGW456L13_3140	0.58	+0.2
3,517,114	-		PfGW456L13_3140	0.58	+1.2
3,517,114	-		PfGW456L13_3140	0.58	+0.3
3,517,114	-		PfGW456L13_3140	0.58	-0.3
3,517,114	-		PfGW456L13_3140	0.58	+1.1
3,517,158	+		PfGW456L13_3140	0.62	+0.1
3,517,201	-		PfGW456L13_3140	0.65	-1.8
3,517,201	-		PfGW456L13_3140	0.65	-0.8
3,517,201	-		PfGW456L13_3140	0.65	+0.4
3,517,242	+		PfGW456L13_3140	0.68	+0.7
3,517,243	-		PfGW456L13_3140	0.68	-0.2
3,517,243	-		PfGW456L13_3140	0.68	-0.5
3,517,243	-		PfGW456L13_3140	0.68	-0.9
3,517,243	-		PfGW456L13_3140	0.68	+0.5
3,517,243	-		PfGW456L13_3140	0.68	+1.4
3,517,251	+		PfGW456L13_3140	0.69	+0.4
3,517,251	+		PfGW456L13_3140	0.69	+0.4
3,517,251	+		PfGW456L13_3140	0.69	+0.5
3,517,263	+		PfGW456L13_3140	0.70	-0.5
3,517,264	-		PfGW456L13_3140	0.70	+0.1
3,517,264	-		PfGW456L13_3140	0.70	+0.4
3,517,318	+		PfGW456L13_3140	0.74	-0.5
3,517,318	+		PfGW456L13_3140	0.74	+0.2
3,517,318	+		PfGW456L13_3140	0.74	-0.5
3,517,319	-		PfGW456L13_3140	0.74	-0.1
3,517,319	-		PfGW456L13_3140	0.74	+0.9
3,517,341	+		PfGW456L13_3140	0.76	+0.5
3,517,341	+		PfGW456L13_3140	0.76	-0.3
3,517,342	-		PfGW456L13_3140	0.76	-2.5
3,517,384	-		PfGW456L13_3140	0.79	+0.8
3,517,384	-		PfGW456L13_3140	0.79	-0.5
3,517,384	-		PfGW456L13_3140	0.79	+0.6
3,517,402	-		PfGW456L13_3140	0.80	-0.3
3,517,444	-		PfGW456L13_3140	0.83	+0.5
3,517,444	-		PfGW456L13_3140	0.83	-0.2
3,517,462	+		PfGW456L13_3140	0.85	-0.2
3,517,462	+		PfGW456L13_3140	0.85	+0.3
3,517,462	+		PfGW456L13_3140	0.85	-1.2
3,517,462	+		PfGW456L13_3140	0.85	+1.0
3,517,464	+		PfGW456L13_3140	0.85	+0.1
3,517,497	+		PfGW456L13_3140	0.87	-0.7
3,517,536	+				-0.2
3,517,536	+				-0.3
3,517,536	+				+0.2
3,517,537	-				-0.3
3,517,537	-				+0.4
3,517,537	-				-0.7
3,517,537	-				-0.9
3,517,557	+				-0.0
3,517,557	+				-0.6
3,517,557	+				+1.1
3,517,557	+				-0.5
3,517,557	+				-0.3
3,517,557	+				-0.1
3,517,558	-				+0.0
3,517,558	-				+0.9
3,517,558	-				+0.2
3,517,558	-				+0.5
3,517,558	-				-0.6
3,517,558	-				-0.0
3,517,558	-				+0.9
3,517,702	+				+0.7
3,517,703	-				+0.5
3,517,768	+				+1.0
3,517,773	+				+0.8
3,517,773	+				+0.5
3,517,815	+				-0.3
3,517,815	+				-0.1
3,517,816	-				+0.3
3,517,869	+				-0.7
3,517,869	+				+0.5
3,517,870	-				-0.1
3,517,870	-				-0.5
3,517,870	-				-0.7
3,517,977	+		PfGW456L13_3141	0.14	-0.6
3,517,977	+		PfGW456L13_3141	0.14	-0.9
3,517,978	-		PfGW456L13_3141	0.14	-0.6
3,517,978	-		PfGW456L13_3141	0.14	-0.4
3,517,978	-		PfGW456L13_3141	0.14	-0.8
3,517,978	-		PfGW456L13_3141	0.14	-0.3
3,517,998	+		PfGW456L13_3141	0.15	+0.1
3,517,998	+		PfGW456L13_3141	0.15	-0.4
3,517,998	+		PfGW456L13_3141	0.15	+1.3
3,517,999	-		PfGW456L13_3141	0.15	-0.7
3,517,999	-		PfGW456L13_3141	0.15	-1.0
3,517,999	-		PfGW456L13_3141	0.15	-0.2
3,517,999	-		PfGW456L13_3141	0.15	-1.0
3,518,047	+		PfGW456L13_3141	0.18	+1.3
3,518,047	+		PfGW456L13_3141	0.18	+0.4
3,518,048	-		PfGW456L13_3141	0.18	-1.1
3,518,048	-		PfGW456L13_3141	0.18	+0.5
3,518,048	-		PfGW456L13_3141	0.18	-0.7
3,518,060	+		PfGW456L13_3141	0.19	+0.3
3,518,061	-		PfGW456L13_3141	0.19	+0.8
3,518,105	+		PfGW456L13_3141	0.22	-0.7
3,518,105	+		PfGW456L13_3141	0.22	-0.4
3,518,105	+		PfGW456L13_3141	0.22	-0.2
3,518,105	+		PfGW456L13_3141	0.22	-0.7
3,518,106	-		PfGW456L13_3141	0.22	+0.7
3,518,106	-		PfGW456L13_3141	0.22	+1.0
3,518,106	-		PfGW456L13_3141	0.22	+0.2
3,518,123	-		PfGW456L13_3141	0.23	+0.7
3,518,199	+		PfGW456L13_3141	0.29	-0.2
3,518,199	+		PfGW456L13_3141	0.29	+0.7
3,518,199	+		PfGW456L13_3141	0.29	-0.6
3,518,200	-		PfGW456L13_3141	0.29	-0.8
3,518,200	-		PfGW456L13_3141	0.29	-1.3
3,518,200	-		PfGW456L13_3141	0.29	+1.0
3,518,200	-		PfGW456L13_3141	0.29	+0.5
3,518,502	+		PfGW456L13_3141	0.49	+0.3
3,518,502	+		PfGW456L13_3141	0.49	-0.8
3,518,506	+		PfGW456L13_3141	0.49	-0.4
3,518,507	-		PfGW456L13_3141	0.49	-0.7
3,518,507	-		PfGW456L13_3141	0.49	-0.4
3,518,586	-		PfGW456L13_3141	0.54	+1.0
3,518,586	-		PfGW456L13_3141	0.54	-0.7
3,518,851	-		PfGW456L13_3141	0.72	-0.7
3,518,851	-		PfGW456L13_3141	0.72	-0.1
3,518,851	-		PfGW456L13_3141	0.72	+0.4
3,519,025	+		PfGW456L13_3141	0.84	-0.5
3,519,037	+		PfGW456L13_3141	0.85	-1.4
3,519,181	-				+0.5
3,519,181	-				-0.7
3,519,181	-				+0.3
3,519,240	+				+0.4
3,519,241	-				-0.2
3,519,241	-				+0.6
3,519,347	+				-0.7
3,519,348	-				-0.7
3,519,348	-				+0.4
3,519,370	+		PfGW456L13_3142	0.12	-0.5
3,519,371	-		PfGW456L13_3142	0.12	-1.6
3,519,371	-		PfGW456L13_3142	0.12	+0.2
3,519,371	-		PfGW456L13_3142	0.12	+1.2
3,519,371	-		PfGW456L13_3142	0.12	+0.5
3,519,371	-		PfGW456L13_3142	0.12	+0.7
3,519,518	+		PfGW456L13_3142	0.28	-0.2
3,519,770	+		PfGW456L13_3142	0.56	+0.9
3,519,770	+		PfGW456L13_3142	0.56	+0.2
3,519,770	+		PfGW456L13_3142	0.56	+1.4
3,519,770	+		PfGW456L13_3142	0.56	+0.1
3,519,770	+		PfGW456L13_3142	0.56	+0.6
3,519,770	+		PfGW456L13_3142	0.56	+1.2
3,519,771	-		PfGW456L13_3142	0.56	-0.5
3,519,848	+		PfGW456L13_3142	0.64	+0.5
3,519,848	+		PfGW456L13_3142	0.64	-0.3
3,519,848	+		PfGW456L13_3142	0.64	+0.1
3,519,848	+		PfGW456L13_3142	0.64	+1.2
3,519,849	-		PfGW456L13_3142	0.64	-0.4
3,519,905	+		PfGW456L13_3142	0.71	+0.5
3,519,905	+		PfGW456L13_3142	0.71	+0.1
3,519,906	-		PfGW456L13_3142	0.71	-0.2
3,520,022	+		PfGW456L13_3142	0.84	-0.7
3,520,023	-		PfGW456L13_3142	0.84	+0.3
3,520,025	+		PfGW456L13_3142	0.84	+1.5
3,520,050	+		PfGW456L13_3142	0.87	+2.3
3,520,051	-		PfGW456L13_3142	0.87	+0.5
3,520,079	+		PfGW456L13_3142	0.90	+0.8
3,520,138	-				+0.1
3,520,149	+				-0.0
3,520,151	+				+0.8
3,520,151	+				-1.1
3,520,151	+				-0.1
3,520,151	+				-0.7
3,520,151	+				+0.1
3,520,152	-				-0.6
3,520,152	-				-0.6
3,520,152	-				-2.1
3,520,152	-				-0.8
3,520,152	-				+0.8
3,520,189	-				-0.0
3,520,200	-				+0.4
3,520,226	-				+0.8
3,520,226	-				-0.6