Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_874 and PfGW456L13_875 are separated by 166 nucleotides PfGW456L13_875 and PfGW456L13_876 are separated by 234 nucleotides PfGW456L13_876 and PfGW456L13_877 overlap by 14 nucleotides
PfGW456L13_874 - Polyphosphate kinase (EC 2.7.4.1), at 980,683 to 982,911
_874
PfGW456L13_875 - Exopolyphosphatase (EC 3.6.1.11), at 983,078 to 984,580
_875
PfGW456L13_876 - Glutamate transport ATP-binding protein, at 984,815 to 985,552
_876
PfGW456L13_877 - Putative amino acid ABC transporter, permease protein, at 985,539 to 986,189
_877
Position (kb) 983
984
985 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 982.117 kb on + strand, within PfGW456L13_874 at 982.117 kb on + strand, within PfGW456L13_874 at 982.117 kb on + strand, within PfGW456L13_874 at 982.117 kb on + strand, within PfGW456L13_874 at 982.117 kb on + strand, within PfGW456L13_874 at 982.117 kb on + strand, within PfGW456L13_874 at 982.117 kb on + strand, within PfGW456L13_874 at 982.117 kb on + strand, within PfGW456L13_874 at 982.117 kb on + strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.118 kb on - strand, within PfGW456L13_874 at 982.212 kb on + strand, within PfGW456L13_874 at 982.216 kb on + strand, within PfGW456L13_874 at 982.216 kb on + strand, within PfGW456L13_874 at 982.216 kb on + strand, within PfGW456L13_874 at 982.216 kb on + strand, within PfGW456L13_874 at 982.216 kb on + strand, within PfGW456L13_874 at 982.216 kb on + strand, within PfGW456L13_874 at 982.216 kb on + strand, within PfGW456L13_874 at 982.216 kb on + strand, within PfGW456L13_874 at 982.216 kb on + strand, within PfGW456L13_874 at 982.216 kb on + strand, within PfGW456L13_874 at 982.217 kb on - strand, within PfGW456L13_874 at 982.217 kb on - strand, within PfGW456L13_874 at 982.217 kb on - strand, within PfGW456L13_874 at 982.217 kb on - strand, within PfGW456L13_874 at 982.217 kb on - strand, within PfGW456L13_874 at 982.217 kb on - strand, within PfGW456L13_874 at 982.240 kb on + strand, within PfGW456L13_874 at 982.240 kb on + strand, within PfGW456L13_874 at 982.240 kb on + strand, within PfGW456L13_874 at 982.241 kb on - strand, within PfGW456L13_874 at 982.241 kb on - strand, within PfGW456L13_874 at 982.241 kb on - strand, within PfGW456L13_874 at 982.241 kb on - strand, within PfGW456L13_874 at 982.250 kb on - strand, within PfGW456L13_874 at 982.250 kb on - strand, within PfGW456L13_874 at 982.250 kb on - strand, within PfGW456L13_874 at 982.250 kb on - strand, within PfGW456L13_874 at 982.250 kb on - strand, within PfGW456L13_874 at 982.324 kb on - strand, within PfGW456L13_874 at 982.324 kb on - strand, within PfGW456L13_874 at 982.486 kb on + strand, within PfGW456L13_874 at 982.486 kb on + strand, within PfGW456L13_874 at 982.486 kb on + strand, within PfGW456L13_874 at 982.486 kb on + strand, within PfGW456L13_874 at 982.486 kb on + strand, within PfGW456L13_874 at 982.486 kb on + strand, within PfGW456L13_874 at 982.486 kb on + strand, within PfGW456L13_874 at 982.486 kb on + strand, within PfGW456L13_874 at 982.486 kb on + strand, within PfGW456L13_874 at 982.486 kb on + strand, within PfGW456L13_874 at 982.486 kb on + strand, within PfGW456L13_874 at 982.487 kb on - strand, within PfGW456L13_874 at 982.487 kb on - strand, within PfGW456L13_874 at 982.487 kb on - strand, within PfGW456L13_874 at 982.487 kb on - strand, within PfGW456L13_874 at 982.487 kb on - strand, within PfGW456L13_874 at 982.487 kb on - strand, within PfGW456L13_874 at 982.487 kb on - strand, within PfGW456L13_874 at 982.627 kb on + strand, within PfGW456L13_874 at 982.627 kb on + strand, within PfGW456L13_874 at 982.627 kb on + strand, within PfGW456L13_874 at 982.768 kb on + strand at 982.768 kb on + strand at 982.768 kb on + strand at 982.768 kb on + strand at 982.769 kb on - strand at 982.769 kb on - strand at 982.769 kb on - strand at 982.769 kb on - strand at 982.769 kb on - strand at 982.816 kb on + strand at 982.816 kb on + strand at 982.817 kb on - strand at 982.817 kb on - strand at 982.817 kb on - strand at 982.824 kb on + strand at 982.824 kb on + strand at 983.017 kb on + strand at 983.018 kb on - strand at 983.277 kb on - strand, within PfGW456L13_875 at 983.448 kb on + strand, within PfGW456L13_875 at 983.580 kb on - strand, within PfGW456L13_875 at 983.673 kb on + strand, within PfGW456L13_875 at 983.673 kb on + strand, within PfGW456L13_875 at 983.794 kb on + strand, within PfGW456L13_875 at 984.009 kb on + strand, within PfGW456L13_875 at 984.066 kb on + strand, within PfGW456L13_875 at 984.066 kb on + strand, within PfGW456L13_875 at 984.066 kb on + strand, within PfGW456L13_875 at 984.067 kb on - strand, within PfGW456L13_875 at 984.207 kb on + strand, within PfGW456L13_875 at 984.208 kb on - strand, within PfGW456L13_875 at 984.208 kb on - strand, within PfGW456L13_875 at 984.350 kb on - strand, within PfGW456L13_875 at 984.350 kb on - strand, within PfGW456L13_875 at 984.738 kb on + strand at 984.739 kb on - strand at 984.739 kb on - strand at 984.881 kb on + strand at 984.881 kb on + strand at 984.881 kb on + strand at 984.881 kb on + strand at 984.881 kb on + strand at 984.881 kb on + strand at 984.934 kb on + strand, within PfGW456L13_876 at 984.934 kb on + strand, within PfGW456L13_876 at 984.935 kb on - strand, within PfGW456L13_876 at 984.935 kb on - strand, within PfGW456L13_876 at 984.935 kb on - strand, within PfGW456L13_876 at 984.935 kb on - strand, within PfGW456L13_876 at 984.935 kb on - strand, within PfGW456L13_876 at 985.070 kb on + strand, within PfGW456L13_876 at 985.070 kb on + strand, within PfGW456L13_876 at 985.070 kb on + strand, within PfGW456L13_876 at 985.070 kb on + strand, within PfGW456L13_876 at 985.070 kb on + strand, within PfGW456L13_876 at 985.070 kb on + strand, within PfGW456L13_876 at 985.071 kb on - strand, within PfGW456L13_876 at 985.071 kb on - strand, within PfGW456L13_876 at 985.071 kb on - strand, within PfGW456L13_876 at 985.356 kb on + strand, within PfGW456L13_876 at 985.515 kb on + strand at 985.515 kb on + strand at 985.516 kb on - strand at 985.516 kb on - strand at 985.516 kb on - strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.518 kb on + strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.519 kb on - strand at 985.522 kb on + strand at 985.522 kb on + strand at 985.522 kb on + strand at 985.522 kb on + strand at 985.522 kb on + strand at 985.523 kb on - strand at 985.523 kb on - strand at 985.523 kb on - strand at 985.523 kb on - strand at 985.523 kb on - strand at 985.523 kb on - strand at 985.540 kb on + strand at 985.540 kb on + strand at 985.541 kb on - strand at 985.570 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 982,117 + PfGW456L13_874 0.64 -1.6 982,117 + PfGW456L13_874 0.64 -0.7 982,117 + PfGW456L13_874 0.64 -1.7 982,117 + PfGW456L13_874 0.64 -1.9 982,117 + PfGW456L13_874 0.64 -2.6 982,117 + PfGW456L13_874 0.64 -1.5 982,117 + PfGW456L13_874 0.64 -0.1 982,117 + PfGW456L13_874 0.64 -1.0 982,117 + PfGW456L13_874 0.64 -1.8 982,118 - PfGW456L13_874 0.64 -2.0 982,118 - PfGW456L13_874 0.64 -1.3 982,118 - PfGW456L13_874 0.64 +0.5 982,118 - PfGW456L13_874 0.64 -1.0 982,118 - PfGW456L13_874 0.64 -1.1 982,118 - PfGW456L13_874 0.64 -1.6 982,118 - PfGW456L13_874 0.64 -0.0 982,118 - PfGW456L13_874 0.64 -0.3 982,118 - PfGW456L13_874 0.64 -0.9 982,118 - PfGW456L13_874 0.64 -1.6 982,118 - PfGW456L13_874 0.64 -3.5 982,118 - PfGW456L13_874 0.64 +0.4 982,118 - PfGW456L13_874 0.64 -1.0 982,118 - PfGW456L13_874 0.64 -0.9 982,118 - PfGW456L13_874 0.64 -0.6 982,118 - PfGW456L13_874 0.64 -0.9 982,118 - PfGW456L13_874 0.64 -1.9 982,118 - PfGW456L13_874 0.64 -3.0 982,118 - PfGW456L13_874 0.64 -1.8 982,118 - PfGW456L13_874 0.64 -2.7 982,118 - PfGW456L13_874 0.64 -3.0 982,118 - PfGW456L13_874 0.64 -0.3 982,212 + PfGW456L13_874 0.69 -0.8 982,216 + PfGW456L13_874 0.69 -0.6 982,216 + PfGW456L13_874 0.69 -0.2 982,216 + PfGW456L13_874 0.69 -0.2 982,216 + PfGW456L13_874 0.69 -2.5 982,216 + PfGW456L13_874 0.69 -1.5 982,216 + PfGW456L13_874 0.69 -1.8 982,216 + PfGW456L13_874 0.69 +0.7 982,216 + PfGW456L13_874 0.69 -0.7 982,216 + PfGW456L13_874 0.69 -2.3 982,216 + PfGW456L13_874 0.69 -2.8 982,217 - PfGW456L13_874 0.69 -2.5 982,217 - PfGW456L13_874 0.69 +0.4 982,217 - PfGW456L13_874 0.69 -0.8 982,217 - PfGW456L13_874 0.69 -2.2 982,217 - PfGW456L13_874 0.69 -0.8 982,217 - PfGW456L13_874 0.69 -0.2 982,240 + PfGW456L13_874 0.70 -0.6 982,240 + PfGW456L13_874 0.70 -1.1 982,240 + PfGW456L13_874 0.70 -0.4 982,241 - PfGW456L13_874 0.70 -0.7 982,241 - PfGW456L13_874 0.70 -1.7 982,241 - PfGW456L13_874 0.70 -1.1 982,241 - PfGW456L13_874 0.70 -1.3 982,250 - PfGW456L13_874 0.70 -0.2 982,250 - PfGW456L13_874 0.70 -0.2 982,250 - PfGW456L13_874 0.70 -0.7 982,250 - PfGW456L13_874 0.70 -1.5 982,250 - PfGW456L13_874 0.70 -0.9 982,324 - PfGW456L13_874 0.74 -3.4 982,324 - PfGW456L13_874 0.74 -0.2 982,486 + PfGW456L13_874 0.81 -1.5 982,486 + PfGW456L13_874 0.81 -1.1 982,486 + PfGW456L13_874 0.81 -1.1 982,486 + PfGW456L13_874 0.81 -0.6 982,486 + PfGW456L13_874 0.81 -0.5 982,486 + PfGW456L13_874 0.81 -1.2 982,486 + PfGW456L13_874 0.81 +0.7 982,486 + PfGW456L13_874 0.81 -2.3 982,486 + PfGW456L13_874 0.81 -2.6 982,486 + PfGW456L13_874 0.81 -1.6 982,486 + PfGW456L13_874 0.81 -0.7 982,487 - PfGW456L13_874 0.81 -1.0 982,487 - PfGW456L13_874 0.81 -0.7 982,487 - PfGW456L13_874 0.81 -1.2 982,487 - PfGW456L13_874 0.81 -0.8 982,487 - PfGW456L13_874 0.81 -2.7 982,487 - PfGW456L13_874 0.81 -1.0 982,487 - PfGW456L13_874 0.81 -1.5 982,627 + PfGW456L13_874 0.87 -1.6 982,627 + PfGW456L13_874 0.87 -0.0 982,627 + PfGW456L13_874 0.87 -1.5 982,768 + -2.8 982,768 + -2.4 982,768 + -2.7 982,768 + -2.4 982,769 - -2.2 982,769 - -1.5 982,769 - -1.3 982,769 - -0.6 982,769 - -0.5 982,816 + -3.1 982,816 + -1.5 982,817 - -1.0 982,817 - -0.9 982,817 - -0.4 982,824 + -0.0 982,824 + -1.1 983,017 + +1.0 983,018 - +0.5 983,277 - PfGW456L13_875 0.13 +0.8 983,448 + PfGW456L13_875 0.25 -1.0 983,580 - PfGW456L13_875 0.33 -0.6 983,673 + PfGW456L13_875 0.40 -1.9 983,673 + PfGW456L13_875 0.40 +0.0 983,794 + PfGW456L13_875 0.48 -2.1 984,009 + PfGW456L13_875 0.62 -1.2 984,066 + PfGW456L13_875 0.66 -0.5 984,066 + PfGW456L13_875 0.66 -2.4 984,066 + PfGW456L13_875 0.66 -3.6 984,067 - PfGW456L13_875 0.66 -0.8 984,207 + PfGW456L13_875 0.75 -2.5 984,208 - PfGW456L13_875 0.75 -0.8 984,208 - PfGW456L13_875 0.75 -0.2 984,350 - PfGW456L13_875 0.85 +1.0 984,350 - PfGW456L13_875 0.85 -1.9 984,738 + +0.3 984,739 - +0.5 984,739 - -0.1 984,881 + +0.6 984,881 + -0.5 984,881 + +0.4 984,881 + -0.1 984,881 + -0.6 984,881 + -0.6 984,934 + PfGW456L13_876 0.16 +0.4 984,934 + PfGW456L13_876 0.16 -1.5 984,935 - PfGW456L13_876 0.16 +0.1 984,935 - PfGW456L13_876 0.16 +0.3 984,935 - PfGW456L13_876 0.16 -1.1 984,935 - PfGW456L13_876 0.16 +0.2 984,935 - PfGW456L13_876 0.16 -0.5 985,070 + PfGW456L13_876 0.35 +0.6 985,070 + PfGW456L13_876 0.35 +0.1 985,070 + PfGW456L13_876 0.35 +0.3 985,070 + PfGW456L13_876 0.35 +1.4 985,070 + PfGW456L13_876 0.35 +0.3 985,070 + PfGW456L13_876 0.35 -0.2 985,071 - PfGW456L13_876 0.35 -0.1 985,071 - PfGW456L13_876 0.35 -0.8 985,071 - PfGW456L13_876 0.35 +0.1 985,356 + PfGW456L13_876 0.73 -0.1 985,515 + -0.4 985,515 + -0.1 985,516 - +0.1 985,516 - -0.3 985,516 - +3.0 985,518 + -0.3 985,518 + -0.2 985,518 + -1.3 985,518 + -0.0 985,518 + +0.5 985,518 + +0.8 985,518 + -0.2 985,518 + -0.3 985,518 + +0.1 985,518 + -0.9 985,518 + +0.2 985,518 + +0.3 985,518 + -1.6 985,518 + +0.5 985,518 + -0.3 985,518 + -0.3 985,519 - -1.7 985,519 - -0.1 985,519 - +0.0 985,519 - +0.5 985,519 - +0.2 985,519 - +1.8 985,519 - -0.7 985,519 - -0.7 985,519 - +0.4 985,519 - +0.8 985,519 - -0.2 985,519 - +0.4 985,519 - -0.7 985,519 - -0.0 985,519 - +0.6 985,519 - -0.4 985,519 - +0.6 985,519 - +0.2 985,519 - +0.3 985,519 - +0.0 985,519 - +0.1 985,519 - +0.1 985,522 + -0.6 985,522 + +0.5 985,522 + +0.3 985,522 + +0.8 985,522 + +0.4 985,523 - +0.1 985,523 - +0.0 985,523 - +0.7 985,523 - +0.4 985,523 - +0.6 985,523 - -0.2 985,540 + +0.9 985,540 + +0.3 985,541 - +1.5 985,570 + +0.4
Or see this region's nucleotide sequence