Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_476 and PfGW456L13_477 overlap by 4 nucleotides PfGW456L13_477 and PfGW456L13_478 are separated by 15 nucleotides
PfGW456L13_476 - Alkanesulfonates transport system permease protein, at 546,157 to 547,755
_476
PfGW456L13_477 - Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB, at 547,752 to 548,567
_477
PfGW456L13_478 - Arylsulfatase (EC 3.1.6.1), at 548,583 to 550,193
_478
Position (kb) 547
548
549 Strain fitness (log2 ratio) -2
-1
0
1
2 at 546.832 kb on + strand, within PfGW456L13_476 at 547.310 kb on + strand, within PfGW456L13_476 at 547.502 kb on + strand, within PfGW456L13_476 at 547.503 kb on - strand, within PfGW456L13_476 at 547.503 kb on - strand, within PfGW456L13_476 at 547.503 kb on - strand, within PfGW456L13_476 at 547.551 kb on + strand, within PfGW456L13_476 at 547.555 kb on + strand, within PfGW456L13_476 at 547.555 kb on + strand, within PfGW456L13_476 at 547.555 kb on + strand, within PfGW456L13_476 at 547.556 kb on - strand, within PfGW456L13_476 at 547.556 kb on - strand, within PfGW456L13_476 at 547.585 kb on + strand, within PfGW456L13_476 at 547.585 kb on + strand, within PfGW456L13_476 at 547.585 kb on + strand, within PfGW456L13_476 at 547.585 kb on + strand, within PfGW456L13_476 at 547.586 kb on - strand, within PfGW456L13_476 at 547.586 kb on - strand, within PfGW456L13_476 at 548.468 kb on - strand, within PfGW456L13_477 at 548.508 kb on + strand at 548.509 kb on - strand at 549.027 kb on + strand, within PfGW456L13_478 at 549.027 kb on + strand, within PfGW456L13_478 at 549.028 kb on - strand, within PfGW456L13_478 at 549.072 kb on + strand, within PfGW456L13_478 at 549.073 kb on - strand, within PfGW456L13_478 at 549.073 kb on - strand, within PfGW456L13_478 at 549.073 kb on - strand, within PfGW456L13_478 at 549.112 kb on - strand, within PfGW456L13_478 at 549.117 kb on + strand, within PfGW456L13_478 at 549.117 kb on + strand, within PfGW456L13_478 at 549.153 kb on + strand, within PfGW456L13_478 at 549.154 kb on - strand, within PfGW456L13_478 at 549.154 kb on - strand, within PfGW456L13_478 at 549.192 kb on + strand, within PfGW456L13_478 at 549.193 kb on - strand, within PfGW456L13_478 at 549.283 kb on + strand, within PfGW456L13_478 at 549.283 kb on + strand, within PfGW456L13_478 at 549.283 kb on + strand, within PfGW456L13_478 at 549.283 kb on + strand, within PfGW456L13_478 at 549.284 kb on - strand, within PfGW456L13_478 at 549.284 kb on - strand, within PfGW456L13_478 at 549.430 kb on - strand, within PfGW456L13_478 at 549.480 kb on + strand, within PfGW456L13_478 at 549.481 kb on - strand, within PfGW456L13_478 at 549.481 kb on - strand, within PfGW456L13_478
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 546,832 + PfGW456L13_476 0.42 +0.6 547,310 + PfGW456L13_476 0.72 +0.2 547,502 + PfGW456L13_476 0.84 -0.4 547,503 - PfGW456L13_476 0.84 -0.9 547,503 - PfGW456L13_476 0.84 +0.3 547,503 - PfGW456L13_476 0.84 -0.9 547,551 + PfGW456L13_476 0.87 +0.9 547,555 + PfGW456L13_476 0.87 -1.9 547,555 + PfGW456L13_476 0.87 -0.0 547,555 + PfGW456L13_476 0.87 -0.1 547,556 - PfGW456L13_476 0.87 +0.1 547,556 - PfGW456L13_476 0.87 -0.8 547,585 + PfGW456L13_476 0.89 +0.4 547,585 + PfGW456L13_476 0.89 -0.5 547,585 + PfGW456L13_476 0.89 -1.2 547,585 + PfGW456L13_476 0.89 -0.5 547,586 - PfGW456L13_476 0.89 +1.9 547,586 - PfGW456L13_476 0.89 -2.4 548,468 - PfGW456L13_477 0.88 -1.8 548,508 + +0.5 548,509 - +0.3 549,027 + PfGW456L13_478 0.28 +0.5 549,027 + PfGW456L13_478 0.28 -0.1 549,028 - PfGW456L13_478 0.28 +0.3 549,072 + PfGW456L13_478 0.30 +0.5 549,073 - PfGW456L13_478 0.30 +0.3 549,073 - PfGW456L13_478 0.30 -0.6 549,073 - PfGW456L13_478 0.30 +0.1 549,112 - PfGW456L13_478 0.33 +1.2 549,117 + PfGW456L13_478 0.33 +0.7 549,117 + PfGW456L13_478 0.33 -0.2 549,153 + PfGW456L13_478 0.35 -0.7 549,154 - PfGW456L13_478 0.35 -0.1 549,154 - PfGW456L13_478 0.35 +1.3 549,192 + PfGW456L13_478 0.38 -0.8 549,193 - PfGW456L13_478 0.38 +0.2 549,283 + PfGW456L13_478 0.43 +0.8 549,283 + PfGW456L13_478 0.43 +0.3 549,283 + PfGW456L13_478 0.43 +1.1 549,283 + PfGW456L13_478 0.43 -0.1 549,284 - PfGW456L13_478 0.44 -0.4 549,284 - PfGW456L13_478 0.44 -2.1 549,430 - PfGW456L13_478 0.53 -0.4 549,480 + PfGW456L13_478 0.56 +0.7 549,481 - PfGW456L13_478 0.56 +0.3 549,481 - PfGW456L13_478 0.56 +0.6
Or see this region's nucleotide sequence