Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4252 and PfGW456L13_4253 overlap by 1 nucleotides PfGW456L13_4253 and PfGW456L13_4254 are separated by 8 nucleotides PfGW456L13_4254 and PfGW456L13_4255 are separated by 201 nucleotides
PfGW456L13_4252 - Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1), at 4,765,815 to 4,766,954
_4252
PfGW456L13_4253 - Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2), at 4,766,954 to 4,767,604
_4253
PfGW456L13_4254 - FIG00955360: hypothetical protein, at 4,767,613 to 4,768,326
_4254
PfGW456L13_4255 - FIG00964480: hypothetical protein, at 4,768,528 to 4,768,944
_4255
Position (kb) 4766
4767
4768 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 4766.959 kb on + strand at 4766.959 kb on + strand at 4766.959 kb on + strand at 4767.086 kb on + strand, within PfGW456L13_4253 at 4767.115 kb on + strand, within PfGW456L13_4253 at 4767.308 kb on + strand, within PfGW456L13_4253 at 4767.318 kb on + strand, within PfGW456L13_4253 at 4767.319 kb on - strand, within PfGW456L13_4253 at 4767.426 kb on + strand, within PfGW456L13_4253 at 4767.427 kb on - strand, within PfGW456L13_4253 at 4767.432 kb on + strand, within PfGW456L13_4253 at 4767.570 kb on + strand at 4767.602 kb on + strand at 4767.613 kb on - strand at 4767.698 kb on - strand, within PfGW456L13_4254 at 4767.698 kb on - strand, within PfGW456L13_4254 at 4767.753 kb on + strand, within PfGW456L13_4254 at 4767.865 kb on + strand, within PfGW456L13_4254 at 4767.865 kb on + strand, within PfGW456L13_4254 at 4768.006 kb on + strand, within PfGW456L13_4254 at 4768.006 kb on + strand, within PfGW456L13_4254 at 4768.007 kb on - strand, within PfGW456L13_4254 at 4768.057 kb on + strand, within PfGW456L13_4254 at 4768.058 kb on - strand, within PfGW456L13_4254 at 4768.086 kb on + strand, within PfGW456L13_4254 at 4768.087 kb on - strand, within PfGW456L13_4254 at 4768.090 kb on + strand, within PfGW456L13_4254 at 4768.090 kb on + strand, within PfGW456L13_4254 at 4768.090 kb on + strand, within PfGW456L13_4254 at 4768.090 kb on + strand, within PfGW456L13_4254 at 4768.090 kb on + strand, within PfGW456L13_4254 at 4768.090 kb on + strand, within PfGW456L13_4254 at 4768.090 kb on + strand, within PfGW456L13_4254 at 4768.091 kb on - strand, within PfGW456L13_4254 at 4768.091 kb on - strand, within PfGW456L13_4254 at 4768.091 kb on - strand, within PfGW456L13_4254 at 4768.091 kb on - strand, within PfGW456L13_4254 at 4768.091 kb on - strand, within PfGW456L13_4254 at 4768.091 kb on - strand, within PfGW456L13_4254 at 4768.091 kb on - strand, within PfGW456L13_4254 at 4768.091 kb on - strand, within PfGW456L13_4254 at 4768.225 kb on + strand, within PfGW456L13_4254 at 4768.270 kb on + strand at 4768.270 kb on + strand at 4768.343 kb on + strand at 4768.344 kb on - strand at 4768.371 kb on + strand at 4768.394 kb on + strand at 4768.395 kb on - strand at 4768.471 kb on - strand at 4768.471 kb on - strand at 4768.471 kb on - strand at 4768.471 kb on - strand at 4768.536 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 4,766,959 + -0.6 4,766,959 + -0.1 4,766,959 + -0.4 4,767,086 + PfGW456L13_4253 0.20 -0.6 4,767,115 + PfGW456L13_4253 0.25 -1.3 4,767,308 + PfGW456L13_4253 0.54 -1.6 4,767,318 + PfGW456L13_4253 0.56 -1.1 4,767,319 - PfGW456L13_4253 0.56 -0.6 4,767,426 + PfGW456L13_4253 0.73 -2.6 4,767,427 - PfGW456L13_4253 0.73 -0.3 4,767,432 + PfGW456L13_4253 0.73 -0.8 4,767,570 + -1.0 4,767,602 + -0.6 4,767,613 - -1.6 4,767,698 - PfGW456L13_4254 0.12 -1.8 4,767,698 - PfGW456L13_4254 0.12 -2.2 4,767,753 + PfGW456L13_4254 0.20 -1.4 4,767,865 + PfGW456L13_4254 0.35 -0.8 4,767,865 + PfGW456L13_4254 0.35 -3.6 4,768,006 + PfGW456L13_4254 0.55 -0.6 4,768,006 + PfGW456L13_4254 0.55 -1.7 4,768,007 - PfGW456L13_4254 0.55 -0.4 4,768,057 + PfGW456L13_4254 0.62 -1.9 4,768,058 - PfGW456L13_4254 0.62 -0.8 4,768,086 + PfGW456L13_4254 0.66 -0.2 4,768,087 - PfGW456L13_4254 0.66 +0.1 4,768,090 + PfGW456L13_4254 0.67 -2.1 4,768,090 + PfGW456L13_4254 0.67 -2.2 4,768,090 + PfGW456L13_4254 0.67 +1.8 4,768,090 + PfGW456L13_4254 0.67 -0.1 4,768,090 + PfGW456L13_4254 0.67 -1.8 4,768,090 + PfGW456L13_4254 0.67 -0.3 4,768,090 + PfGW456L13_4254 0.67 -4.1 4,768,091 - PfGW456L13_4254 0.67 -1.3 4,768,091 - PfGW456L13_4254 0.67 -0.5 4,768,091 - PfGW456L13_4254 0.67 -0.4 4,768,091 - PfGW456L13_4254 0.67 +0.2 4,768,091 - PfGW456L13_4254 0.67 -2.8 4,768,091 - PfGW456L13_4254 0.67 +0.5 4,768,091 - PfGW456L13_4254 0.67 -0.5 4,768,091 - PfGW456L13_4254 0.67 -1.2 4,768,225 + PfGW456L13_4254 0.86 +0.5 4,768,270 + -1.7 4,768,270 + -1.5 4,768,343 + -0.2 4,768,344 - -0.3 4,768,371 + -0.2 4,768,394 + +1.5 4,768,395 - -0.0 4,768,471 - +0.2 4,768,471 - -0.8 4,768,471 - +0.4 4,768,471 - -0.1 4,768,536 + +0.7
Or see this region's nucleotide sequence