Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3941

Experiment: L-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (N)
4,417,338	-				+1.4
4,417,410	-				-0.8
4,417,438	-				-1.0
4,417,438	-				+0.4
4,417,438	-				-0.8
4,417,438	-				+0.1
4,417,505	+				-3.8
4,417,506	-				-1.5
4,417,506	-				-2.2
4,417,506	-				-2.6
4,417,506	-				-0.0
4,417,506	-				-0.8
4,417,577	-		PfGW456L13_3940	0.16	-2.4
4,417,577	-		PfGW456L13_3940	0.16	-2.0
4,417,663	-		PfGW456L13_3940	0.30	-1.9
4,417,714	+		PfGW456L13_3940	0.38	-2.7
4,417,714	+		PfGW456L13_3940	0.38	-2.9
4,417,714	+		PfGW456L13_3940	0.38	-3.6
4,417,714	+		PfGW456L13_3940	0.38	-3.4
4,417,714	+		PfGW456L13_3940	0.38	-4.1
4,417,714	+		PfGW456L13_3940	0.38	-2.0
4,417,714	+		PfGW456L13_3940	0.38	-4.0
4,417,714	+		PfGW456L13_3940	0.38	-4.8
4,417,714	+		PfGW456L13_3940	0.38	-5.0
4,417,714	+		PfGW456L13_3940	0.38	-3.0
4,417,715	-		PfGW456L13_3940	0.38	-1.2
4,417,715	-		PfGW456L13_3940	0.38	-3.4
4,417,715	-		PfGW456L13_3940	0.38	-4.8
4,417,715	-		PfGW456L13_3940	0.38	-3.8
4,417,715	-		PfGW456L13_3940	0.38	-1.7
4,417,715	-		PfGW456L13_3940	0.38	-2.2
4,417,718	+		PfGW456L13_3940	0.39	-3.4
4,417,747	+		PfGW456L13_3940	0.43	-1.2
4,417,747	+		PfGW456L13_3940	0.43	-2.0
4,417,747	+		PfGW456L13_3940	0.43	-2.6
4,417,747	+		PfGW456L13_3940	0.43	-2.4
4,417,748	-		PfGW456L13_3940	0.43	-3.7
4,417,748	-		PfGW456L13_3940	0.43	-3.7
4,417,748	-		PfGW456L13_3940	0.43	-2.7
4,417,804	+		PfGW456L13_3940	0.52	-2.7
4,417,804	+		PfGW456L13_3940	0.52	-3.2
4,417,804	+		PfGW456L13_3940	0.52	-1.4
4,417,805	-		PfGW456L13_3940	0.52	-2.6
4,417,805	-		PfGW456L13_3940	0.52	-4.0
4,418,005	+		PfGW456L13_3940	0.84	-3.3
4,418,006	-		PfGW456L13_3940	0.85	-3.3
4,418,061	+				-2.8
4,418,061	+				-2.8
4,418,061	+				-2.3
4,418,062	-				+1.1
4,418,062	-				-3.0
4,418,108	+				-3.1
4,418,108	+				-2.4
4,418,109	-				+0.3
4,418,212	+				-1.6
4,418,260	+		PfGW456L13_3941	0.11	-1.0
4,418,260	+		PfGW456L13_3941	0.11	-0.7
4,418,261	-		PfGW456L13_3941	0.11	+0.6
4,418,261	-		PfGW456L13_3941	0.11	-0.5
4,418,261	-		PfGW456L13_3941	0.11	-0.5
4,418,261	-		PfGW456L13_3941	0.11	-1.9
4,418,261	-		PfGW456L13_3941	0.11	-1.1
4,418,261	-		PfGW456L13_3941	0.11	-0.3
4,418,390	+		PfGW456L13_3941	0.26	-0.1
4,418,390	+		PfGW456L13_3941	0.26	-0.7
4,418,390	+		PfGW456L13_3941	0.26	-0.8
4,418,390	+		PfGW456L13_3941	0.26	-3.4
4,418,390	+		PfGW456L13_3941	0.26	-1.3
4,418,390	+		PfGW456L13_3941	0.26	-1.3
4,418,390	+		PfGW456L13_3941	0.26	-0.4
4,418,390	+		PfGW456L13_3941	0.26	-1.2
4,418,390	+		PfGW456L13_3941	0.26	+0.0
4,418,390	+		PfGW456L13_3941	0.26	+0.6
4,418,390	+		PfGW456L13_3941	0.26	+0.1
4,418,390	+		PfGW456L13_3941	0.26	-1.4
4,418,390	+		PfGW456L13_3941	0.26	-1.2
4,418,390	+		PfGW456L13_3941	0.26	-0.1
4,418,391	-		PfGW456L13_3941	0.26	+0.1
4,418,391	-		PfGW456L13_3941	0.26	-0.4
4,418,391	-		PfGW456L13_3941	0.26	-1.2
4,418,391	-		PfGW456L13_3941	0.26	-0.5
4,418,391	-		PfGW456L13_3941	0.26	-1.5
4,418,391	-		PfGW456L13_3941	0.26	-0.8
4,418,391	-		PfGW456L13_3941	0.26	+0.1
4,418,391	-		PfGW456L13_3941	0.26	-1.4
4,418,417	+		PfGW456L13_3941	0.29	-1.6
4,418,537	-		PfGW456L13_3941	0.43	-1.3
4,418,629	+		PfGW456L13_3941	0.54	-0.1
4,418,630	-		PfGW456L13_3941	0.54	-0.5
4,418,630	-		PfGW456L13_3941	0.54	-1.0
4,418,630	-		PfGW456L13_3941	0.54	-1.4
4,418,630	-		PfGW456L13_3941	0.54	-0.4
4,418,630	-		PfGW456L13_3941	0.54	-3.2
4,418,638	+		PfGW456L13_3941	0.55	-1.3
4,418,639	-		PfGW456L13_3941	0.55	-0.2
4,418,947	+				-0.4
4,418,948	-				-1.2
4,419,005	+				-2.6
4,419,006	-				-0.4
4,419,009	+				+1.1
4,419,009	+				+0.4
4,419,009	+				-0.7
4,419,009	+				-0.0
4,419,009	+				+0.7
4,419,009	+				-0.1
4,419,010	-				-0.4
4,419,010	-				-0.3
4,419,010	-				-1.2
4,419,010	-				-0.3
4,419,010	-				+0.8
4,419,010	-				-0.8
4,419,010	-				-0.7
4,419,010	-				-1.7
4,419,010	-				+0.6
4,419,011	+				-0.8
4,419,011	+				+0.6
4,419,012	-				+0.7
4,419,012	-				+0.3
4,419,012	-				+0.7
4,419,012	-				-0.3
4,419,012	-				+0.1
4,419,041	+				-0.4
4,419,041	+				-0.3
4,419,042	-				-0.1
4,419,042	-				+1.0
4,419,042	-				-0.2
4,419,057	+				-1.9
4,419,057	+				+1.3
4,419,057	+				-0.2
4,419,058	-				+0.8
4,419,058	-				+0.3
4,419,058	-				-0.2
4,419,058	-				+0.6
4,419,058	-				-0.3
4,419,058	-				+1.1
4,419,059	+				-0.4
4,419,059	+				-0.1
4,419,059	+				+0.2
4,419,060	-				+0.4
4,419,060	-				-0.8
4,419,060	-				-0.2
4,419,060	-				+0.7
4,419,060	-				-0.4
4,419,152	+				+0.3
4,419,152	+				+0.6
4,419,152	+				-0.1
4,419,152	+				+0.3
4,419,152	+				+1.0
4,419,152	+				-0.4
4,419,152	+				-0.5
4,419,153	-				-0.4
4,419,153	-				-0.3
4,419,153	-				+0.5
4,419,153	-				+0.1
4,419,153	-				+0.0
4,419,153	-				+0.4
4,419,153	-				-0.5
4,419,153	-				+0.7
4,419,153	-				+0.6
4,419,153	-				-0.6
4,419,208	+				+0.4
4,419,208	+				+0.2
4,419,208	+				-0.5
4,419,208	+				+0.7
4,419,209	-				-0.1
4,419,331	+				-0.9
4,419,332	-				+0.0
4,419,383	+				-0.8
4,419,383	+				+0.3
4,419,383	+				-0.3
4,419,383	+				-1.6
4,419,383	+				+0.3
4,419,384	-				+0.4
4,419,384	-				+0.0
4,419,384	-				-0.8
4,419,384	-				+0.2
4,419,384	-				-0.0
4,419,384	-				-0.1
4,419,409	-				-0.7