Strain Fitness in Pseudomonas putida KT2440 around PP_4598

Experiment: Butanol 0.6 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Butanol 0.6 vol%
5,217,024	+				+0.4
5,217,024	+				+0.1
5,217,024	+				+1.4
5,217,025	-				-0.7
5,217,025	-				+0.1
5,217,025	-				-0.3
5,217,157	+		PP_4597	0.23	-0.8
5,217,157	+		PP_4597	0.23	+0.4
5,217,157	+		PP_4597	0.23	-1.2
5,217,352	+		PP_4597	0.42	+0.1
5,217,353	-		PP_4597	0.42	+1.2
5,217,353	-		PP_4597	0.42	+0.6
5,217,362	-		PP_4597	0.43	-2.5
5,217,571	+		PP_4597	0.64	+0.8
5,217,639	+		PP_4597	0.71	+0.8
5,218,094	+		PP_4598	0.16	-0.7
5,218,094	+		PP_4598	0.16	+0.2
5,218,099	-		PP_4598	0.16	-1.3
5,218,481	+		PP_4598	0.59	+1.5
5,218,482	-		PP_4598	0.59	-0.2
5,218,588	+		PP_4598	0.71	+0.6
5,218,588	+		PP_4598	0.71	+1.2
5,218,588	+		PP_4598	0.71	-1.8
5,218,589	-		PP_4598	0.71	-0.0
5,218,589	-		PP_4598	0.71	-0.2
5,218,589	-		PP_4598	0.71	+0.4
5,218,589	-		PP_4598	0.71	-2.3
5,218,591	+		PP_4598	0.71	-0.8
5,218,592	-		PP_4598	0.71	-1.4
5,218,592	-		PP_4598	0.71	-0.6
5,218,592	-		PP_4598	0.71	-1.4
5,218,595	+		PP_4598	0.71	-1.1
5,218,595	+		PP_4598	0.71	-1.5
5,218,838	+				-1.4
5,218,839	-				-1.0
5,218,839	-				+1.0
5,218,839	-				+0.8
5,218,901	-				+0.8
5,218,901	-				-1.4
5,218,906	-				+0.7