Strain Fitness in Pseudomonas putida KT2440 around PP_2254

Experiment: Butanol 0.6 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Butanol 0.6 vol%
2,569,455	+				+0.2
2,569,455	+				-0.5
2,569,456	-				-0.7
2,569,588	+				-0.7
2,569,588	+				+0.9
2,569,590	+				+0.2
2,569,590	+				-0.8
2,569,590	+				+0.4
2,569,590	+				-1.1
2,569,591	-				+0.5
2,569,591	-				-0.3
2,570,000	-		PP_2253	0.45	-0.0
2,570,295	+		PP_2253	0.89	-0.7
2,570,297	+		PP_2253	0.89	-1.0
2,570,411	-				-0.7
2,570,411	-				+0.3
2,570,661	+		PP_2254	0.40	+0.4
2,570,661	+		PP_2254	0.40	-0.7
2,570,661	+		PP_2254	0.40	-1.0
2,570,661	+		PP_2254	0.40	-0.9
2,570,661	+		PP_2254	0.40	-0.0
2,570,662	-		PP_2254	0.40	-1.1
2,570,662	-		PP_2254	0.40	-0.8
2,571,511	+		PP_2255	0.29	+0.8
2,571,511	+		PP_2255	0.29	-0.1
2,571,511	+		PP_2255	0.29	-0.8
2,571,512	-		PP_2255	0.29	-0.6
2,571,670	+		PP_2255	0.41	-0.2
2,571,671	-		PP_2255	0.42	-1.1
2,571,754	+		PP_2255	0.48	-0.3
2,571,755	-		PP_2255	0.48	-0.7
2,571,803	-		PP_2255	0.52	+0.4