Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4204 and PfGW456L13_4205 are separated by 34 nucleotides PfGW456L13_4205 and PfGW456L13_4206 are separated by 114 nucleotides PfGW456L13_4206 and PfGW456L13_4207 are separated by 369 nucleotides
PfGW456L13_4204 - ABC transporter, ATP-binding protein, at 4,715,232 to 4,716,221
_4204
PfGW456L13_4205 - Phosphoserine phosphatase (EC 3.1.3.3), at 4,716,256 to 4,716,909
_4205
PfGW456L13_4206 - Quinone oxidoreductase (EC 1.6.5.5), at 4,717,024 to 4,717,722
_4206
PfGW456L13_4207 - Periplasmic protease, at 4,718,092 to 4,720,206
_4207
Position (kb)
4717
4718 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4716.214 kb on + strand at 4716.215 kb on - strand at 4716.215 kb on - strand at 4716.424 kb on + strand, within PfGW456L13_4205 at 4716.424 kb on + strand, within PfGW456L13_4205 at 4716.424 kb on + strand, within PfGW456L13_4205 at 4716.424 kb on + strand, within PfGW456L13_4205 at 4716.424 kb on + strand, within PfGW456L13_4205 at 4716.424 kb on + strand, within PfGW456L13_4205 at 4716.424 kb on + strand, within PfGW456L13_4205 at 4716.425 kb on - strand, within PfGW456L13_4205 at 4716.425 kb on - strand, within PfGW456L13_4205 at 4716.425 kb on - strand, within PfGW456L13_4205 at 4716.425 kb on - strand, within PfGW456L13_4205 at 4716.425 kb on - strand, within PfGW456L13_4205 at 4716.425 kb on - strand, within PfGW456L13_4205 at 4716.425 kb on - strand, within PfGW456L13_4205 at 4716.425 kb on - strand, within PfGW456L13_4205 at 4716.679 kb on + strand, within PfGW456L13_4205 at 4716.679 kb on + strand, within PfGW456L13_4205 at 4716.680 kb on - strand, within PfGW456L13_4205 at 4716.784 kb on + strand, within PfGW456L13_4205 at 4716.785 kb on - strand, within PfGW456L13_4205 at 4716.897 kb on + strand at 4716.898 kb on - strand at 4716.908 kb on - strand at 4717.071 kb on + strand at 4717.071 kb on + strand at 4717.071 kb on + strand at 4717.072 kb on - strand at 4717.075 kb on - strand at 4717.075 kb on - strand at 4717.075 kb on - strand at 4717.075 kb on - strand at 4717.358 kb on + strand, within PfGW456L13_4206 at 4717.359 kb on - strand, within PfGW456L13_4206 at 4717.359 kb on - strand, within PfGW456L13_4206 at 4717.466 kb on + strand, within PfGW456L13_4206 at 4717.466 kb on + strand, within PfGW456L13_4206 at 4717.810 kb on + strand at 4717.810 kb on + strand at 4717.903 kb on + strand at 4717.903 kb on + strand at 4717.903 kb on + strand at 4717.903 kb on + strand at 4717.904 kb on - strand at 4717.904 kb on - strand at 4717.904 kb on - strand at 4717.904 kb on - strand at 4717.905 kb on + strand at 4717.905 kb on + strand at 4717.905 kb on + strand at 4717.906 kb on - strand at 4717.906 kb on - strand at 4717.952 kb on - strand at 4718.023 kb on + strand at 4718.023 kb on + strand at 4718.024 kb on - strand at 4718.088 kb on + strand at 4718.089 kb on - strand at 4718.089 kb on - strand at 4718.089 kb on - strand at 4718.091 kb on + strand at 4718.091 kb on + strand at 4718.091 kb on + strand at 4718.091 kb on + strand at 4718.091 kb on + strand at 4718.091 kb on + strand at 4718.092 kb on - strand at 4718.092 kb on - strand at 4718.160 kb on - strand at 4718.197 kb on - strand at 4718.197 kb on - strand at 4718.197 kb on - strand at 4718.197 kb on - strand at 4718.212 kb on - strand at 4718.212 kb on - strand at 4718.291 kb on - strand at 4718.333 kb on - strand, within PfGW456L13_4207 at 4718.333 kb on - strand, within PfGW456L13_4207 at 4718.333 kb on - strand, within PfGW456L13_4207 at 4718.341 kb on + strand, within PfGW456L13_4207 at 4718.342 kb on - strand, within PfGW456L13_4207 at 4718.342 kb on - strand, within PfGW456L13_4207 at 4718.371 kb on + strand, within PfGW456L13_4207 at 4718.467 kb on + strand, within PfGW456L13_4207 at 4718.468 kb on - strand, within PfGW456L13_4207 at 4718.511 kb on + strand, within PfGW456L13_4207
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 4,716,214 + -0.4 4,716,215 - +0.0 4,716,215 - +1.1 4,716,424 + PfGW456L13_4205 0.26 +1.5 4,716,424 + PfGW456L13_4205 0.26 +1.8 4,716,424 + PfGW456L13_4205 0.26 -0.8 4,716,424 + PfGW456L13_4205 0.26 +0.1 4,716,424 + PfGW456L13_4205 0.26 +0.7 4,716,424 + PfGW456L13_4205 0.26 +0.6 4,716,424 + PfGW456L13_4205 0.26 +0.5 4,716,425 - PfGW456L13_4205 0.26 +0.2 4,716,425 - PfGW456L13_4205 0.26 +0.5 4,716,425 - PfGW456L13_4205 0.26 -0.8 4,716,425 - PfGW456L13_4205 0.26 +0.7 4,716,425 - PfGW456L13_4205 0.26 -0.2 4,716,425 - PfGW456L13_4205 0.26 -0.4 4,716,425 - PfGW456L13_4205 0.26 -1.0 4,716,425 - PfGW456L13_4205 0.26 +0.1 4,716,679 + PfGW456L13_4205 0.65 +0.7 4,716,679 + PfGW456L13_4205 0.65 +0.2 4,716,680 - PfGW456L13_4205 0.65 +1.1 4,716,784 + PfGW456L13_4205 0.81 +0.3 4,716,785 - PfGW456L13_4205 0.81 -0.0 4,716,897 + +0.5 4,716,898 - -0.6 4,716,908 - +0.3 4,717,071 + -0.5 4,717,071 + -0.0 4,717,071 + -1.3 4,717,072 - +0.2 4,717,075 - +1.0 4,717,075 - +0.1 4,717,075 - +1.0 4,717,075 - +1.9 4,717,358 + PfGW456L13_4206 0.48 -0.8 4,717,359 - PfGW456L13_4206 0.48 -0.7 4,717,359 - PfGW456L13_4206 0.48 +1.6 4,717,466 + PfGW456L13_4206 0.63 +0.6 4,717,466 + PfGW456L13_4206 0.63 -0.9 4,717,810 + -2.2 4,717,810 + -0.7 4,717,903 + -2.0 4,717,903 + +0.3 4,717,903 + +0.3 4,717,903 + -1.5 4,717,904 - -0.0 4,717,904 - -1.0 4,717,904 - +0.7 4,717,904 - -0.4 4,717,905 + +1.9 4,717,905 + -0.4 4,717,905 + -0.8 4,717,906 - -0.1 4,717,906 - +1.3 4,717,952 - -1.1 4,718,023 + +0.7 4,718,023 + +0.7 4,718,024 - -0.5 4,718,088 + -0.1 4,718,089 - -0.9 4,718,089 - -1.1 4,718,089 - -0.0 4,718,091 + +1.2 4,718,091 + +1.0 4,718,091 + -0.3 4,718,091 + -0.3 4,718,091 + -0.8 4,718,091 + +0.7 4,718,092 - -1.2 4,718,092 - -0.8 4,718,160 - -0.2 4,718,197 - +0.1 4,718,197 - -0.4 4,718,197 - -0.0 4,718,197 - -1.4 4,718,212 - -1.1 4,718,212 - +1.0 4,718,291 - -0.4 4,718,333 - PfGW456L13_4207 0.11 +0.2 4,718,333 - PfGW456L13_4207 0.11 -0.8 4,718,333 - PfGW456L13_4207 0.11 -1.6 4,718,341 + PfGW456L13_4207 0.12 -1.8 4,718,342 - PfGW456L13_4207 0.12 +1.1 4,718,342 - PfGW456L13_4207 0.12 -1.4 4,718,371 + PfGW456L13_4207 0.13 -2.9 4,718,467 + PfGW456L13_4207 0.18 +1.6 4,718,468 - PfGW456L13_4207 0.18 -0.0 4,718,511 + PfGW456L13_4207 0.20 -2.5
Or see this region's nucleotide sequence