Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2517 and PfGW456L13_2518 are separated by 247 nucleotides PfGW456L13_2518 and PfGW456L13_2519 overlap by 2 nucleotides
PfGW456L13_2517 - FIG067310: hypothetical protein, at 2,782,533 to 2,784,014
_2517
PfGW456L13_2518 - hypothetical protein, at 2,784,262 to 2,784,378
_2518
PfGW456L13_2519 - 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4), at 2,784,377 to 2,786,119
_2519
Position (kb)
2784
2785 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2783.263 kb on + strand, within PfGW456L13_2517 at 2783.362 kb on + strand, within PfGW456L13_2517 at 2783.362 kb on + strand, within PfGW456L13_2517 at 2783.362 kb on + strand, within PfGW456L13_2517 at 2783.362 kb on + strand, within PfGW456L13_2517 at 2783.363 kb on - strand, within PfGW456L13_2517 at 2783.363 kb on - strand, within PfGW456L13_2517 at 2783.363 kb on - strand, within PfGW456L13_2517 at 2783.366 kb on + strand, within PfGW456L13_2517 at 2783.367 kb on - strand, within PfGW456L13_2517 at 2783.367 kb on - strand, within PfGW456L13_2517 at 2783.367 kb on - strand, within PfGW456L13_2517 at 2783.401 kb on + strand, within PfGW456L13_2517 at 2783.402 kb on - strand, within PfGW456L13_2517 at 2783.402 kb on - strand, within PfGW456L13_2517 at 2783.402 kb on - strand, within PfGW456L13_2517 at 2783.402 kb on - strand, within PfGW456L13_2517 at 2783.402 kb on - strand, within PfGW456L13_2517 at 2783.402 kb on - strand, within PfGW456L13_2517 at 2783.407 kb on + strand, within PfGW456L13_2517 at 2783.410 kb on + strand, within PfGW456L13_2517 at 2783.632 kb on + strand, within PfGW456L13_2517 at 2783.632 kb on + strand, within PfGW456L13_2517 at 2783.638 kb on + strand, within PfGW456L13_2517 at 2783.639 kb on - strand, within PfGW456L13_2517 at 2783.639 kb on - strand, within PfGW456L13_2517 at 2783.639 kb on - strand, within PfGW456L13_2517 at 2783.641 kb on + strand, within PfGW456L13_2517 at 2783.780 kb on - strand, within PfGW456L13_2517 at 2783.809 kb on + strand, within PfGW456L13_2517 at 2783.810 kb on - strand, within PfGW456L13_2517 at 2783.959 kb on + strand at 2784.054 kb on + strand at 2784.054 kb on + strand at 2784.055 kb on - strand at 2784.055 kb on - strand at 2784.096 kb on + strand at 2784.105 kb on + strand at 2784.106 kb on - strand at 2784.181 kb on + strand at 2784.181 kb on + strand at 2784.233 kb on - strand at 2784.264 kb on - strand at 2784.614 kb on + strand, within PfGW456L13_2519 at 2784.614 kb on + strand, within PfGW456L13_2519 at 2784.614 kb on + strand, within PfGW456L13_2519 at 2784.615 kb on - strand, within PfGW456L13_2519 at 2784.615 kb on - strand, within PfGW456L13_2519 at 2784.615 kb on - strand, within PfGW456L13_2519 at 2784.615 kb on - strand, within PfGW456L13_2519 at 2784.665 kb on + strand, within PfGW456L13_2519 at 2784.665 kb on + strand, within PfGW456L13_2519 at 2784.749 kb on + strand, within PfGW456L13_2519 at 2784.750 kb on - strand, within PfGW456L13_2519 at 2784.750 kb on - strand, within PfGW456L13_2519 at 2784.750 kb on - strand, within PfGW456L13_2519 at 2784.752 kb on + strand, within PfGW456L13_2519 at 2785.236 kb on - strand, within PfGW456L13_2519 at 2785.368 kb on - strand, within PfGW456L13_2519 at 2785.368 kb on - strand, within PfGW456L13_2519 at 2785.368 kb on - strand, within PfGW456L13_2519 at 2785.368 kb on - strand, within PfGW456L13_2519
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 2,783,263 + PfGW456L13_2517 0.49 -2.6 2,783,362 + PfGW456L13_2517 0.56 -0.2 2,783,362 + PfGW456L13_2517 0.56 +0.7 2,783,362 + PfGW456L13_2517 0.56 -1.0 2,783,362 + PfGW456L13_2517 0.56 -0.3 2,783,363 - PfGW456L13_2517 0.56 -2.2 2,783,363 - PfGW456L13_2517 0.56 -0.4 2,783,363 - PfGW456L13_2517 0.56 -0.1 2,783,366 + PfGW456L13_2517 0.56 +0.0 2,783,367 - PfGW456L13_2517 0.56 -2.8 2,783,367 - PfGW456L13_2517 0.56 -0.7 2,783,367 - PfGW456L13_2517 0.56 -1.7 2,783,401 + PfGW456L13_2517 0.59 -1.6 2,783,402 - PfGW456L13_2517 0.59 -0.5 2,783,402 - PfGW456L13_2517 0.59 +0.8 2,783,402 - PfGW456L13_2517 0.59 +0.6 2,783,402 - PfGW456L13_2517 0.59 -1.9 2,783,402 - PfGW456L13_2517 0.59 +1.5 2,783,402 - PfGW456L13_2517 0.59 -2.5 2,783,407 + PfGW456L13_2517 0.59 -0.7 2,783,410 + PfGW456L13_2517 0.59 -0.6 2,783,632 + PfGW456L13_2517 0.74 +1.3 2,783,632 + PfGW456L13_2517 0.74 +0.3 2,783,638 + PfGW456L13_2517 0.75 +0.8 2,783,639 - PfGW456L13_2517 0.75 -0.3 2,783,639 - PfGW456L13_2517 0.75 +0.6 2,783,639 - PfGW456L13_2517 0.75 +0.2 2,783,641 + PfGW456L13_2517 0.75 -0.4 2,783,780 - PfGW456L13_2517 0.84 -0.2 2,783,809 + PfGW456L13_2517 0.86 -0.5 2,783,810 - PfGW456L13_2517 0.86 -0.1 2,783,959 + -1.0 2,784,054 + +0.3 2,784,054 + +0.9 2,784,055 - -0.0 2,784,055 - +0.9 2,784,096 + +0.9 2,784,105 + -0.4 2,784,106 - +0.5 2,784,181 + -0.0 2,784,181 + -0.6 2,784,233 - +0.5 2,784,264 - -1.0 2,784,614 + PfGW456L13_2519 0.14 +0.8 2,784,614 + PfGW456L13_2519 0.14 -0.8 2,784,614 + PfGW456L13_2519 0.14 -0.4 2,784,615 - PfGW456L13_2519 0.14 -0.1 2,784,615 - PfGW456L13_2519 0.14 +0.8 2,784,615 - PfGW456L13_2519 0.14 -1.0 2,784,615 - PfGW456L13_2519 0.14 +1.0 2,784,665 + PfGW456L13_2519 0.17 -1.4 2,784,665 + PfGW456L13_2519 0.17 +0.8 2,784,749 + PfGW456L13_2519 0.21 -0.4 2,784,750 - PfGW456L13_2519 0.21 +0.5 2,784,750 - PfGW456L13_2519 0.21 +0.9 2,784,750 - PfGW456L13_2519 0.21 +0.2 2,784,752 + PfGW456L13_2519 0.22 -2.1 2,785,236 - PfGW456L13_2519 0.49 -1.7 2,785,368 - PfGW456L13_2519 0.57 -0.0 2,785,368 - PfGW456L13_2519 0.57 -0.3 2,785,368 - PfGW456L13_2519 0.57 -0.7 2,785,368 - PfGW456L13_2519 0.57 -0.1
Or see this region's nucleotide sequence