Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2374 and PfGW456L13_2375 are separated by 72 nucleotides PfGW456L13_2375 and PfGW456L13_2376 are separated by 11 nucleotides
PfGW456L13_2374 - Non-ribosomal peptide synthetase modules, pyoverdine, at 2,608,638 to 2,617,844
_2374
PfGW456L13_2375 - SyrP-like protein, at 2,617,917 to 2,618,975
_2375
PfGW456L13_2376 - Peptide synthetase, at 2,618,987 to 2,622,085
_2376
Position (kb)
2617
2618
2619 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2617.242 kb on - strand at 2617.312 kb on + strand at 2617.312 kb on + strand at 2617.313 kb on - strand at 2617.313 kb on - strand at 2617.313 kb on - strand at 2617.316 kb on - strand at 2617.489 kb on - strand at 2617.591 kb on - strand at 2617.916 kb on + strand at 2617.916 kb on + strand at 2618.214 kb on + strand, within PfGW456L13_2375 at 2618.214 kb on + strand, within PfGW456L13_2375 at 2618.214 kb on + strand, within PfGW456L13_2375 at 2618.215 kb on - strand, within PfGW456L13_2375 at 2618.265 kb on + strand, within PfGW456L13_2375 at 2618.265 kb on + strand, within PfGW456L13_2375 at 2618.265 kb on + strand, within PfGW456L13_2375 at 2618.265 kb on + strand, within PfGW456L13_2375 at 2618.266 kb on - strand, within PfGW456L13_2375 at 2618.266 kb on - strand, within PfGW456L13_2375 at 2618.266 kb on - strand, within PfGW456L13_2375 at 2618.266 kb on - strand, within PfGW456L13_2375 at 2618.266 kb on - strand, within PfGW456L13_2375 at 2618.266 kb on - strand, within PfGW456L13_2375 at 2618.281 kb on - strand, within PfGW456L13_2375 at 2618.350 kb on - strand, within PfGW456L13_2375 at 2618.355 kb on + strand, within PfGW456L13_2375 at 2618.355 kb on + strand, within PfGW456L13_2375 at 2618.356 kb on - strand, within PfGW456L13_2375 at 2618.356 kb on - strand, within PfGW456L13_2375 at 2618.469 kb on + strand, within PfGW456L13_2375 at 2618.469 kb on + strand, within PfGW456L13_2375 at 2618.469 kb on + strand, within PfGW456L13_2375 at 2618.469 kb on + strand, within PfGW456L13_2375 at 2618.470 kb on - strand, within PfGW456L13_2375 at 2618.470 kb on - strand, within PfGW456L13_2375 at 2618.470 kb on - strand, within PfGW456L13_2375 at 2618.470 kb on - strand, within PfGW456L13_2375 at 2618.470 kb on - strand, within PfGW456L13_2375 at 2618.470 kb on - strand, within PfGW456L13_2375 at 2618.481 kb on + strand, within PfGW456L13_2375 at 2618.481 kb on + strand, within PfGW456L13_2375 at 2618.550 kb on + strand at 2618.550 kb on + strand, within PfGW456L13_2375 at 2618.817 kb on + strand, within PfGW456L13_2375 at 2618.818 kb on - strand, within PfGW456L13_2375 at 2618.818 kb on - strand, within PfGW456L13_2375 at 2618.973 kb on + strand at 2618.973 kb on + strand at 2618.973 kb on + strand at 2619.015 kb on + strand at 2619.015 kb on + strand at 2619.016 kb on - strand at 2619.021 kb on + strand at 2619.021 kb on + strand at 2619.022 kb on - strand at 2619.022 kb on - strand at 2619.050 kb on + strand at 2619.051 kb on - strand at 2619.051 kb on - strand at 2619.498 kb on - strand, within PfGW456L13_2376
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 2,617,242 - -0.1 2,617,312 + -0.6 2,617,312 + +0.3 2,617,313 - +0.3 2,617,313 - +0.7 2,617,313 - -0.0 2,617,316 - +0.0 2,617,489 - -1.4 2,617,591 - +0.8 2,617,916 + +2.0 2,617,916 + +1.8 2,618,214 + PfGW456L13_2375 0.28 +0.5 2,618,214 + PfGW456L13_2375 0.28 -0.0 2,618,214 + PfGW456L13_2375 0.28 -0.4 2,618,215 - PfGW456L13_2375 0.28 -0.1 2,618,265 + PfGW456L13_2375 0.33 -1.9 2,618,265 + PfGW456L13_2375 0.33 -0.1 2,618,265 + PfGW456L13_2375 0.33 +1.2 2,618,265 + PfGW456L13_2375 0.33 -0.3 2,618,266 - PfGW456L13_2375 0.33 -0.4 2,618,266 - PfGW456L13_2375 0.33 -0.4 2,618,266 - PfGW456L13_2375 0.33 +1.2 2,618,266 - PfGW456L13_2375 0.33 +0.0 2,618,266 - PfGW456L13_2375 0.33 -0.6 2,618,266 - PfGW456L13_2375 0.33 -1.3 2,618,281 - PfGW456L13_2375 0.34 -0.3 2,618,350 - PfGW456L13_2375 0.41 +0.3 2,618,355 + PfGW456L13_2375 0.41 -0.6 2,618,355 + PfGW456L13_2375 0.41 +1.5 2,618,356 - PfGW456L13_2375 0.41 -0.1 2,618,356 - PfGW456L13_2375 0.41 +0.3 2,618,469 + PfGW456L13_2375 0.52 -0.4 2,618,469 + PfGW456L13_2375 0.52 +0.2 2,618,469 + PfGW456L13_2375 0.52 +0.5 2,618,469 + PfGW456L13_2375 0.52 -0.4 2,618,470 - PfGW456L13_2375 0.52 +0.6 2,618,470 - PfGW456L13_2375 0.52 +0.6 2,618,470 - PfGW456L13_2375 0.52 +0.2 2,618,470 - PfGW456L13_2375 0.52 -1.1 2,618,470 - PfGW456L13_2375 0.52 -0.2 2,618,470 - PfGW456L13_2375 0.52 +0.3 2,618,481 + PfGW456L13_2375 0.53 +0.1 2,618,481 + PfGW456L13_2375 0.53 -1.3 2,618,550 + -1.1 2,618,550 + PfGW456L13_2375 0.60 +1.0 2,618,817 + PfGW456L13_2375 0.85 -0.6 2,618,818 - PfGW456L13_2375 0.85 +1.5 2,618,818 - PfGW456L13_2375 0.85 -0.1 2,618,973 + -2.8 2,618,973 + +1.1 2,618,973 + -1.1 2,619,015 + +1.2 2,619,015 + -1.1 2,619,016 - -0.1 2,619,021 + -0.5 2,619,021 + +0.5 2,619,022 - +0.8 2,619,022 - +0.5 2,619,050 + -0.1 2,619,051 - -0.1 2,619,051 - -0.3 2,619,498 - PfGW456L13_2376 0.16 -0.1
Or see this region's nucleotide sequence