Experiment: Isobutyl alcohol 0.6 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4952 and PP_4953 are separated by 122 nucleotides PP_4953 and PP_4954 are separated by 128 nucleotides
PP_4952: PP_4952 - ATP-dependent RNA helicase, specific for 23S rRNA, at 5,641,830 to 5,643,215
_4952
PP_4953: PP_4953 - putative oxidoreductase with FAD/NAD(P)-binding domain, at 5,643,338 to 5,644,519
_4953
PP_4954: PP_4954 - conserved membrane protein of unknown function, at 5,644,648 to 5,646,831
_4954
Position (kb)
5643
5644
5645 Strain fitness (log2 ratio)
-2
-1
0
1 at 5642.398 kb on - strand, within PP_4952 at 5642.921 kb on + strand, within PP_4952 at 5643.210 kb on - strand at 5643.213 kb on + strand at 5643.214 kb on - strand at 5643.214 kb on - strand at 5643.235 kb on + strand at 5643.504 kb on - strand, within PP_4953 at 5643.615 kb on - strand, within PP_4953 at 5644.259 kb on + strand, within PP_4953 at 5644.259 kb on + strand, within PP_4953 at 5644.259 kb on + strand, within PP_4953 at 5644.311 kb on + strand, within PP_4953 at 5644.311 kb on + strand, within PP_4953 at 5644.311 kb on + strand, within PP_4953 at 5644.312 kb on - strand, within PP_4953 at 5644.312 kb on - strand, within PP_4953 at 5644.421 kb on + strand at 5644.421 kb on + strand at 5644.422 kb on - strand at 5644.518 kb on - strand at 5644.522 kb on + strand at 5644.522 kb on + strand at 5644.523 kb on - strand at 5644.523 kb on - strand at 5644.523 kb on - strand at 5644.576 kb on + strand at 5644.617 kb on + strand at 5644.617 kb on + strand at 5644.708 kb on + strand at 5644.708 kb on + strand at 5644.708 kb on + strand at 5644.708 kb on + strand at 5644.760 kb on - strand at 5644.760 kb on - strand at 5644.910 kb on + strand, within PP_4954 at 5644.910 kb on + strand, within PP_4954 at 5644.911 kb on - strand, within PP_4954 at 5644.911 kb on - strand, within PP_4954 at 5645.032 kb on + strand, within PP_4954 at 5645.033 kb on - strand, within PP_4954 at 5645.033 kb on - strand, within PP_4954 at 5645.209 kb on + strand, within PP_4954 at 5645.210 kb on - strand, within PP_4954 at 5645.373 kb on - strand, within PP_4954 at 5645.381 kb on - strand, within PP_4954 at 5645.393 kb on - strand, within PP_4954 at 5645.393 kb on - strand, within PP_4954 at 5645.443 kb on + strand, within PP_4954
Per-strain Table
Position Strand Gene LocusTag Fraction Isobutyl alcohol 0.6 vol% remove 5,642,398 - PP_4952 0.41 +0.7 5,642,921 + PP_4952 0.79 -0.4 5,643,210 - -0.4 5,643,213 + +1.3 5,643,214 - +0.3 5,643,214 - +0.3 5,643,235 + -0.8 5,643,504 - PP_4953 0.14 -1.0 5,643,615 - PP_4953 0.23 +0.5 5,644,259 + PP_4953 0.78 -0.4 5,644,259 + PP_4953 0.78 -0.4 5,644,259 + PP_4953 0.78 +1.0 5,644,311 + PP_4953 0.82 -0.1 5,644,311 + PP_4953 0.82 -2.4 5,644,311 + PP_4953 0.82 -1.7 5,644,312 - PP_4953 0.82 -0.8 5,644,312 - PP_4953 0.82 -0.5 5,644,421 + +1.5 5,644,421 + -0.4 5,644,422 - -0.0 5,644,518 - +0.5 5,644,522 + +0.3 5,644,522 + -0.6 5,644,523 - -0.5 5,644,523 - -0.6 5,644,523 - +0.4 5,644,576 + +0.4 5,644,617 + -0.9 5,644,617 + -0.8 5,644,708 + +0.2 5,644,708 + +1.0 5,644,708 + +1.1 5,644,708 + +0.7 5,644,760 - +0.4 5,644,760 - -0.7 5,644,910 + PP_4954 0.12 +0.1 5,644,910 + PP_4954 0.12 -1.3 5,644,911 - PP_4954 0.12 -1.4 5,644,911 - PP_4954 0.12 +0.1 5,645,032 + PP_4954 0.18 +0.0 5,645,033 - PP_4954 0.18 -0.2 5,645,033 - PP_4954 0.18 -0.2 5,645,209 + PP_4954 0.26 -0.4 5,645,210 - PP_4954 0.26 +0.4 5,645,373 - PP_4954 0.33 -1.0 5,645,381 - PP_4954 0.34 +0.7 5,645,393 - PP_4954 0.34 +1.2 5,645,393 - PP_4954 0.34 -0.6 5,645,443 + PP_4954 0.36 +0.5
Or see this region's nucleotide sequence