Experiment: Isobutyl alcohol 0.6 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_3383 and PP_3384 are separated by 3 nucleotides PP_3384 and PP_3385 are separated by 350 nucleotides
PP_3383: PP_3383 - gluconate 2-dehydrogenase flavoprotein subunit, at 3,829,595 to 3,831,379
_3383
PP_3384: PP_3384 - gluconate 2-dehydrogenase gamma subunit, at 3,831,383 to 3,832,123
_3384
PP_3385: PP_3385 - conserved protein of unknown function, at 3,832,474 to 3,833,322
_3385
Position (kb)
3831
3832
3833 Strain fitness (log2 ratio)
-2
-1
0
1 at 3830.491 kb on - strand, within PP_3383 at 3830.597 kb on - strand, within PP_3383 at 3830.622 kb on + strand, within PP_3383 at 3830.623 kb on - strand, within PP_3383 at 3830.623 kb on - strand, within PP_3383 at 3830.623 kb on - strand, within PP_3383 at 3830.628 kb on + strand, within PP_3383 at 3830.628 kb on + strand, within PP_3383 at 3830.628 kb on + strand, within PP_3383 at 3830.629 kb on - strand, within PP_3383 at 3830.629 kb on - strand, within PP_3383 at 3830.629 kb on - strand, within PP_3383 at 3830.629 kb on - strand, within PP_3383 at 3830.629 kb on - strand, within PP_3383 at 3830.629 kb on - strand, within PP_3383 at 3830.638 kb on - strand, within PP_3383 at 3830.698 kb on - strand, within PP_3383 at 3830.698 kb on - strand, within PP_3383 at 3830.698 kb on - strand, within PP_3383 at 3830.698 kb on - strand, within PP_3383 at 3830.730 kb on + strand, within PP_3383 at 3830.730 kb on + strand, within PP_3383 at 3830.731 kb on - strand, within PP_3383 at 3830.731 kb on - strand, within PP_3383 at 3830.739 kb on + strand, within PP_3383 at 3830.740 kb on - strand, within PP_3383 at 3830.780 kb on + strand, within PP_3383 at 3830.926 kb on - strand, within PP_3383 at 3830.926 kb on - strand, within PP_3383 at 3830.926 kb on - strand, within PP_3383 at 3830.944 kb on - strand, within PP_3383 at 3830.965 kb on + strand, within PP_3383 at 3831.010 kb on - strand, within PP_3383 at 3831.173 kb on + strand, within PP_3383 at 3831.174 kb on - strand, within PP_3383 at 3831.204 kb on + strand at 3831.204 kb on + strand at 3831.232 kb on - strand at 3831.250 kb on + strand at 3831.250 kb on + strand at 3831.407 kb on + strand at 3831.748 kb on - strand, within PP_3384 at 3831.792 kb on + strand, within PP_3384 at 3831.793 kb on - strand, within PP_3384 at 3831.793 kb on - strand, within PP_3384 at 3831.793 kb on - strand, within PP_3384 at 3831.793 kb on - strand, within PP_3384 at 3832.158 kb on - strand at 3832.223 kb on + strand at 3832.224 kb on - strand at 3832.224 kb on - strand at 3832.272 kb on - strand at 3832.309 kb on + strand at 3832.585 kb on + strand, within PP_3385 at 3832.606 kb on + strand, within PP_3385 at 3832.607 kb on - strand, within PP_3385 at 3832.761 kb on + strand, within PP_3385 at 3832.764 kb on + strand, within PP_3385 at 3832.765 kb on - strand, within PP_3385 at 3832.793 kb on - strand, within PP_3385 at 3832.816 kb on + strand, within PP_3385 at 3832.817 kb on - strand, within PP_3385 at 3833.041 kb on + strand, within PP_3385 at 3833.041 kb on + strand at 3833.041 kb on + strand, within PP_3385 at 3833.041 kb on + strand, within PP_3385
Per-strain Table
Position Strand Gene LocusTag Fraction Isobutyl alcohol 0.6 vol% remove 3,830,491 - PP_3383 0.50 -1.0 3,830,597 - PP_3383 0.56 -0.1 3,830,622 + PP_3383 0.58 +0.4 3,830,623 - PP_3383 0.58 -0.8 3,830,623 - PP_3383 0.58 -1.1 3,830,623 - PP_3383 0.58 -0.0 3,830,628 + PP_3383 0.58 -0.6 3,830,628 + PP_3383 0.58 -0.4 3,830,628 + PP_3383 0.58 -0.4 3,830,629 - PP_3383 0.58 -1.9 3,830,629 - PP_3383 0.58 +0.7 3,830,629 - PP_3383 0.58 +0.5 3,830,629 - PP_3383 0.58 +0.2 3,830,629 - PP_3383 0.58 +0.2 3,830,629 - PP_3383 0.58 +1.7 3,830,638 - PP_3383 0.58 +0.7 3,830,698 - PP_3383 0.62 +0.6 3,830,698 - PP_3383 0.62 +1.4 3,830,698 - PP_3383 0.62 -1.2 3,830,698 - PP_3383 0.62 +1.1 3,830,730 + PP_3383 0.64 -0.5 3,830,730 + PP_3383 0.64 -0.2 3,830,731 - PP_3383 0.64 +0.3 3,830,731 - PP_3383 0.64 +0.3 3,830,739 + PP_3383 0.64 +0.1 3,830,740 - PP_3383 0.64 -0.9 3,830,780 + PP_3383 0.66 -0.4 3,830,926 - PP_3383 0.75 -0.5 3,830,926 - PP_3383 0.75 -0.2 3,830,926 - PP_3383 0.75 -1.7 3,830,944 - PP_3383 0.76 +1.4 3,830,965 + PP_3383 0.77 -1.8 3,831,010 - PP_3383 0.79 +1.1 3,831,173 + PP_3383 0.88 +0.2 3,831,174 - PP_3383 0.88 +0.1 3,831,204 + -0.0 3,831,204 + +0.7 3,831,232 - -0.2 3,831,250 + +0.3 3,831,250 + +0.5 3,831,407 + +0.2 3,831,748 - PP_3384 0.49 -1.4 3,831,792 + PP_3384 0.55 -1.2 3,831,793 - PP_3384 0.55 -1.1 3,831,793 - PP_3384 0.55 +0.1 3,831,793 - PP_3384 0.55 -0.3 3,831,793 - PP_3384 0.55 -0.3 3,832,158 - -0.2 3,832,223 + +0.7 3,832,224 - -1.3 3,832,224 - +0.8 3,832,272 - +0.7 3,832,309 + +0.5 3,832,585 + PP_3385 0.13 +0.5 3,832,606 + PP_3385 0.16 +0.3 3,832,607 - PP_3385 0.16 +0.6 3,832,761 + PP_3385 0.34 -1.8 3,832,764 + PP_3385 0.34 +0.5 3,832,765 - PP_3385 0.34 +0.1 3,832,793 - PP_3385 0.38 -0.7 3,832,816 + PP_3385 0.40 -0.5 3,832,817 - PP_3385 0.40 -0.5 3,833,041 + PP_3385 0.67 +0.1 3,833,041 + +0.8 3,833,041 + PP_3385 0.67 +0.5 3,833,041 + PP_3385 0.67 -0.5
Or see this region's nucleotide sequence