Strain Fitness in Pseudomonas putida KT2440 around PP_3315

Experiment: Isobutyl alcohol 0.6 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Isobutyl alcohol 0.6 vol%
3,749,564	-		PP_3313	0.21	+0.0
3,749,645	+		PP_3313	0.43	+1.6
3,749,896	+				+0.2
3,749,897	-				+0.8
3,749,898	+				+0.1
3,749,898	+				-0.2
3,749,899	-				-0.1
3,749,899	-				+0.7
3,749,899	-				+0.1
3,749,899	-				-0.5
3,749,899	-				-0.3
3,750,026	+		PP_3314	0.31	+0.6
3,750,100	+		PP_3314	0.47	+0.5
3,750,162	-		PP_3314	0.61	-0.2
3,750,162	-		PP_3314	0.61	-0.7
3,750,162	-		PP_3314	0.61	+0.8
3,750,321	+				+0.9
3,750,321	+				-1.1
3,750,322	-				+0.3
3,750,322	-				-0.3
3,750,322	-				-0.1
3,750,335	+				+1.0
3,750,335	+				+0.9
3,750,336	-				-2.2
3,750,421	-				+0.4
3,750,421	-				+0.0
3,750,471	+				+1.3
3,750,472	-				+0.7
3,750,472	-				+0.7
3,750,530	+				+0.8
3,750,531	-				-0.7
3,750,841	+		PP_3315	0.66	-0.4
3,750,841	+		PP_3315	0.66	-0.9
3,750,856	+		PP_3315	0.69	+0.0
3,750,856	+		PP_3315	0.69	-0.6
3,750,929	+		PP_3315	0.85	-3.3
3,751,259	+				-0.6
3,751,525	-		PP_3316	0.16	+0.4
3,751,525	-		PP_3316	0.16	-0.7
3,751,525	-		PP_3316	0.16	-0.3
3,751,557	+		PP_3316	0.18	+0.4
3,751,637	+		PP_3316	0.20	-0.2
3,751,637	+		PP_3316	0.20	+0.4
3,751,638	-		PP_3316	0.20	+1.1
3,751,684	-		PP_3316	0.22	+0.3
3,751,684	-		PP_3316	0.22	+0.8
3,751,730	+		PP_3316	0.24	-1.1
3,751,739	+		PP_3316	0.24	-1.4
3,751,788	-		PP_3316	0.26	-0.8
3,751,804	-		PP_3316	0.26	-0.5
3,751,804	-				+1.8