Experiment: Isobutyl alcohol 0.6 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_2761 and PP_2762 are separated by 65 nucleotides PP_2762 and PP_2764 are separated by 194 nucleotides PP_2764 and PP_2765 are separated by 26 nucleotides
PP_2761: PP_2761 - putative Ribose ABC transporter, permease protein, at 3,145,578 to 3,146,564
_2761
PP_2762: PP_2762 - acyl-CoA dehydrogenase/oxidase family protein, at 3,146,630 to 3,147,868
_2762
PP_2764: PP_2764 - FMN reductase (NADPH), at 3,148,063 to 3,148,767
_2764
PP_2765: PP_2765 - putative Sulfonate monooxygenase MsuD, at 3,148,794 to 3,149,885
_2765
Position (kb)
3146
3147
3148 Strain fitness (log2 ratio)
-2
-1
0
1 at 3145.679 kb on - strand, within PP_2761 at 3145.738 kb on + strand, within PP_2761 at 3145.785 kb on + strand, within PP_2761 at 3145.884 kb on + strand, within PP_2761 at 3145.885 kb on - strand, within PP_2761 at 3145.885 kb on - strand, within PP_2761 at 3145.961 kb on + strand, within PP_2761 at 3145.961 kb on + strand, within PP_2761 at 3145.962 kb on - strand, within PP_2761 at 3146.047 kb on - strand, within PP_2761 at 3146.047 kb on - strand, within PP_2761 at 3146.149 kb on + strand, within PP_2761 at 3146.431 kb on + strand, within PP_2761 at 3146.432 kb on - strand, within PP_2761 at 3146.432 kb on - strand, within PP_2761 at 3146.611 kb on + strand at 3146.663 kb on + strand at 3146.663 kb on + strand at 3146.663 kb on + strand at 3146.663 kb on + strand at 3146.664 kb on - strand at 3146.664 kb on - strand at 3146.667 kb on + strand at 3146.668 kb on - strand at 3146.718 kb on + strand at 3146.834 kb on + strand, within PP_2762 at 3146.835 kb on - strand, within PP_2762 at 3146.835 kb on - strand, within PP_2762 at 3146.835 kb on - strand, within PP_2762 at 3146.937 kb on + strand, within PP_2762 at 3146.988 kb on + strand, within PP_2762 at 3146.989 kb on - strand, within PP_2762 at 3147.157 kb on - strand, within PP_2762 at 3147.157 kb on - strand, within PP_2762 at 3147.393 kb on + strand, within PP_2762 at 3147.396 kb on + strand, within PP_2762 at 3147.822 kb on + strand at 3147.836 kb on - strand at 3148.221 kb on + strand, within PP_2764 at 3148.222 kb on - strand, within PP_2764 at 3148.474 kb on + strand, within PP_2764 at 3148.636 kb on + strand, within PP_2764 at 3148.830 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Isobutyl alcohol 0.6 vol% remove 3,145,679 - PP_2761 0.10 +1.0 3,145,738 + PP_2761 0.16 +0.1 3,145,785 + PP_2761 0.21 +0.6 3,145,884 + PP_2761 0.31 -0.9 3,145,885 - PP_2761 0.31 +0.4 3,145,885 - PP_2761 0.31 +0.3 3,145,961 + PP_2761 0.39 +1.7 3,145,961 + PP_2761 0.39 +0.1 3,145,962 - PP_2761 0.39 -0.7 3,146,047 - PP_2761 0.48 -0.9 3,146,047 - PP_2761 0.48 -0.5 3,146,149 + PP_2761 0.58 +1.0 3,146,431 + PP_2761 0.86 +0.4 3,146,432 - PP_2761 0.87 +0.0 3,146,432 - PP_2761 0.87 -0.9 3,146,611 + -2.0 3,146,663 + +0.3 3,146,663 + -0.7 3,146,663 + +1.1 3,146,663 + -0.6 3,146,664 - +0.8 3,146,664 - -0.0 3,146,667 + -0.1 3,146,668 - -1.6 3,146,718 + +0.3 3,146,834 + PP_2762 0.16 -0.8 3,146,835 - PP_2762 0.17 -1.0 3,146,835 - PP_2762 0.17 -0.1 3,146,835 - PP_2762 0.17 -0.6 3,146,937 + PP_2762 0.25 +0.3 3,146,988 + PP_2762 0.29 -1.1 3,146,989 - PP_2762 0.29 -1.0 3,147,157 - PP_2762 0.43 -0.9 3,147,157 - PP_2762 0.43 -0.3 3,147,393 + PP_2762 0.62 -0.5 3,147,396 + PP_2762 0.62 +0.2 3,147,822 + -0.6 3,147,836 - +0.0 3,148,221 + PP_2764 0.22 -0.1 3,148,222 - PP_2764 0.23 -1.4 3,148,474 + PP_2764 0.58 +0.2 3,148,636 + PP_2764 0.81 -1.1 3,148,830 - +0.5
Or see this region's nucleotide sequence