Strain Fitness in Pseudomonas putida KT2440 around PP_2762

Experiment: Isobutyl alcohol 0.6 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Isobutyl alcohol 0.6 vol%
3,145,679	-		PP_2761	0.10	+1.0
3,145,738	+		PP_2761	0.16	+0.1
3,145,785	+		PP_2761	0.21	+0.6
3,145,884	+		PP_2761	0.31	-0.9
3,145,885	-		PP_2761	0.31	+0.4
3,145,885	-		PP_2761	0.31	+0.3
3,145,961	+		PP_2761	0.39	+1.7
3,145,961	+		PP_2761	0.39	+0.1
3,145,962	-		PP_2761	0.39	-0.7
3,146,047	-		PP_2761	0.48	-0.9
3,146,047	-		PP_2761	0.48	-0.5
3,146,149	+		PP_2761	0.58	+1.0
3,146,431	+		PP_2761	0.86	+0.4
3,146,432	-		PP_2761	0.87	+0.0
3,146,432	-		PP_2761	0.87	-0.9
3,146,611	+				-2.0
3,146,663	+				+0.3
3,146,663	+				-0.7
3,146,663	+				+1.1
3,146,663	+				-0.6
3,146,664	-				+0.8
3,146,664	-				-0.0
3,146,667	+				-0.1
3,146,668	-				-1.6
3,146,718	+				+0.3
3,146,834	+		PP_2762	0.16	-0.8
3,146,835	-		PP_2762	0.17	-1.0
3,146,835	-		PP_2762	0.17	-0.1
3,146,835	-		PP_2762	0.17	-0.6
3,146,937	+		PP_2762	0.25	+0.3
3,146,988	+		PP_2762	0.29	-1.1
3,146,989	-		PP_2762	0.29	-1.0
3,147,157	-		PP_2762	0.43	-0.9
3,147,157	-		PP_2762	0.43	-0.3
3,147,393	+		PP_2762	0.62	-0.5
3,147,396	+		PP_2762	0.62	+0.2
3,147,822	+				-0.6
3,147,836	-				+0.0
3,148,221	+		PP_2764	0.22	-0.1
3,148,222	-		PP_2764	0.23	-1.4
3,148,474	+		PP_2764	0.58	+0.2
3,148,636	+		PP_2764	0.81	-1.1
3,148,830	-				+0.5