Experiment: Isobutyl alcohol 0.6 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_2683 and PP_2684 are separated by 429 nucleotides PP_2684 and PP_2685 are separated by 224 nucleotides
PP_2683: PP_2683 - putative sensory box histidine kinase/response regulator, at 3,072,295 to 3,073,965
_2683
PP_2684: PP_2684 - conserved membrane protein of unknown function, at 3,074,395 to 3,075,105
_2684
PP_2685: PP_2685 - conserved protein of unknown function, at 3,075,330 to 3,076,052
_2685
Position (kb)
3074
3075
3076 Strain fitness (log2 ratio)
-2
-1
0
1 at 3073.526 kb on + strand, within PP_2683 at 3073.637 kb on + strand at 3073.638 kb on - strand, within PP_2683 at 3073.756 kb on + strand, within PP_2683 at 3073.757 kb on - strand, within PP_2683 at 3073.775 kb on + strand, within PP_2683 at 3073.799 kb on - strand at 3073.966 kb on + strand at 3073.967 kb on - strand at 3073.971 kb on + strand at 3073.972 kb on - strand at 3074.003 kb on + strand at 3074.096 kb on + strand at 3074.352 kb on - strand at 3074.416 kb on - strand at 3074.422 kb on - strand at 3074.429 kb on + strand at 3074.463 kb on + strand at 3074.464 kb on - strand at 3074.464 kb on - strand at 3074.519 kb on - strand, within PP_2684 at 3074.529 kb on - strand, within PP_2684 at 3074.563 kb on - strand, within PP_2684 at 3074.813 kb on + strand, within PP_2684 at 3074.817 kb on - strand, within PP_2684 at 3074.864 kb on + strand, within PP_2684 at 3075.186 kb on + strand at 3075.263 kb on + strand at 3075.338 kb on - strand at 3075.338 kb on - strand at 3075.406 kb on + strand, within PP_2685 at 3075.406 kb on + strand, within PP_2685 at 3075.407 kb on - strand, within PP_2685 at 3075.409 kb on + strand, within PP_2685 at 3075.410 kb on - strand, within PP_2685 at 3075.410 kb on - strand, within PP_2685 at 3075.568 kb on + strand, within PP_2685 at 3075.601 kb on + strand, within PP_2685 at 3075.667 kb on + strand, within PP_2685 at 3075.667 kb on + strand, within PP_2685 at 3075.668 kb on - strand, within PP_2685 at 3075.676 kb on + strand, within PP_2685 at 3075.728 kb on + strand, within PP_2685 at 3075.728 kb on + strand, within PP_2685 at 3075.729 kb on - strand, within PP_2685 at 3075.811 kb on + strand, within PP_2685 at 3075.812 kb on - strand, within PP_2685 at 3075.873 kb on + strand, within PP_2685 at 3075.874 kb on - strand, within PP_2685 at 3075.990 kb on - strand at 3075.990 kb on - strand at 3075.990 kb on - strand at 3076.046 kb on - strand at 3076.046 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Isobutyl alcohol 0.6 vol% remove 3,073,526 + PP_2683 0.74 +0.9 3,073,637 + +1.6 3,073,638 - PP_2683 0.80 +1.4 3,073,756 + PP_2683 0.87 +0.5 3,073,757 - PP_2683 0.87 +0.6 3,073,775 + PP_2683 0.89 +0.7 3,073,799 - -0.3 3,073,966 + -0.4 3,073,967 - -0.7 3,073,971 + +0.0 3,073,972 - -2.2 3,074,003 + -0.4 3,074,096 + -0.8 3,074,352 - -0.1 3,074,416 - -0.9 3,074,422 - +1.4 3,074,429 + -0.6 3,074,463 + -1.1 3,074,464 - +1.2 3,074,464 - -0.3 3,074,519 - PP_2684 0.17 -1.2 3,074,529 - PP_2684 0.19 +0.0 3,074,563 - PP_2684 0.24 -2.2 3,074,813 + PP_2684 0.59 -0.3 3,074,817 - PP_2684 0.59 -0.8 3,074,864 + PP_2684 0.66 -1.7 3,075,186 + +1.1 3,075,263 + -0.3 3,075,338 - +0.2 3,075,338 - +0.3 3,075,406 + PP_2685 0.11 -0.6 3,075,406 + PP_2685 0.11 +0.2 3,075,407 - PP_2685 0.11 +1.0 3,075,409 + PP_2685 0.11 +0.5 3,075,410 - PP_2685 0.11 +0.1 3,075,410 - PP_2685 0.11 +0.3 3,075,568 + PP_2685 0.33 +0.4 3,075,601 + PP_2685 0.37 -0.0 3,075,667 + PP_2685 0.47 -0.3 3,075,667 + PP_2685 0.47 -1.5 3,075,668 - PP_2685 0.47 -0.7 3,075,676 + PP_2685 0.48 -0.3 3,075,728 + PP_2685 0.55 -1.0 3,075,728 + PP_2685 0.55 -1.7 3,075,729 - PP_2685 0.55 -0.1 3,075,811 + PP_2685 0.67 +0.1 3,075,812 - PP_2685 0.67 -0.2 3,075,873 + PP_2685 0.75 -0.1 3,075,874 - PP_2685 0.75 +1.4 3,075,990 - -0.4 3,075,990 - +0.5 3,075,990 - -0.7 3,076,046 - -0.0 3,076,046 - -0.5
Or see this region's nucleotide sequence