Strain Fitness in Pseudomonas putida KT2440 around PP_2684

Experiment: Isobutyl alcohol 0.6 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Isobutyl alcohol 0.6 vol%
3,073,526	+		PP_2683	0.74	+0.9
3,073,637	+				+1.6
3,073,638	-		PP_2683	0.80	+1.4
3,073,756	+		PP_2683	0.87	+0.5
3,073,757	-		PP_2683	0.87	+0.6
3,073,775	+		PP_2683	0.89	+0.7
3,073,799	-				-0.3
3,073,966	+				-0.4
3,073,967	-				-0.7
3,073,971	+				+0.0
3,073,972	-				-2.2
3,074,003	+				-0.4
3,074,096	+				-0.8
3,074,352	-				-0.1
3,074,416	-				-0.9
3,074,422	-				+1.4
3,074,429	+				-0.6
3,074,463	+				-1.1
3,074,464	-				+1.2
3,074,464	-				-0.3
3,074,519	-		PP_2684	0.17	-1.2
3,074,529	-		PP_2684	0.19	+0.0
3,074,563	-		PP_2684	0.24	-2.2
3,074,813	+		PP_2684	0.59	-0.3
3,074,817	-		PP_2684	0.59	-0.8
3,074,864	+		PP_2684	0.66	-1.7
3,075,186	+				+1.1
3,075,263	+				-0.3
3,075,338	-				+0.2
3,075,338	-				+0.3
3,075,406	+		PP_2685	0.11	-0.6
3,075,406	+		PP_2685	0.11	+0.2
3,075,407	-		PP_2685	0.11	+1.0
3,075,409	+		PP_2685	0.11	+0.5
3,075,410	-		PP_2685	0.11	+0.1
3,075,410	-		PP_2685	0.11	+0.3
3,075,568	+		PP_2685	0.33	+0.4
3,075,601	+		PP_2685	0.37	-0.0
3,075,667	+		PP_2685	0.47	-0.3
3,075,667	+		PP_2685	0.47	-1.5
3,075,668	-		PP_2685	0.47	-0.7
3,075,676	+		PP_2685	0.48	-0.3
3,075,728	+		PP_2685	0.55	-1.0
3,075,728	+		PP_2685	0.55	-1.7
3,075,729	-		PP_2685	0.55	-0.1
3,075,811	+		PP_2685	0.67	+0.1
3,075,812	-		PP_2685	0.67	-0.2
3,075,873	+		PP_2685	0.75	-0.1
3,075,874	-		PP_2685	0.75	+1.4
3,075,990	-				-0.4
3,075,990	-				+0.5
3,075,990	-				-0.7
3,076,046	-				-0.0
3,076,046	-				-0.5