Experiment: Isobutyl alcohol 0.6 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_2206 and PP_2207 are separated by 186 nucleotides PP_2207 and PP_2208 are separated by 218 nucleotides
PP_2206: PP_2206 - putative peptidase, at 2,511,809 to 2,513,089
_2206
PP_2207: PP_2207 - conserved membrane protein of unknown function, at 2,513,276 to 2,514,340
_2207
PP_2208: PP_2208 - phosphonoacetaldehyde hydrolase, at 2,514,559 to 2,515,386
_2208
Position (kb)
2513
2514
2515 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2512.374 kb on + strand, within PP_2206 at 2512.375 kb on - strand, within PP_2206 at 2512.375 kb on - strand, within PP_2206 at 2512.375 kb on - strand, within PP_2206 at 2512.375 kb on - strand, within PP_2206 at 2512.375 kb on - strand, within PP_2206 at 2512.534 kb on - strand at 2512.590 kb on + strand, within PP_2206 at 2512.617 kb on + strand, within PP_2206 at 2512.617 kb on + strand, within PP_2206 at 2512.947 kb on + strand at 2512.947 kb on + strand, within PP_2206 at 2512.948 kb on - strand, within PP_2206 at 2513.053 kb on - strand at 2513.174 kb on - strand at 2513.245 kb on + strand at 2513.246 kb on - strand at 2513.246 kb on - strand at 2513.255 kb on + strand at 2513.256 kb on - strand at 2513.293 kb on - strand at 2513.361 kb on - strand at 2513.361 kb on - strand at 2513.550 kb on - strand, within PP_2207 at 2513.712 kb on + strand, within PP_2207 at 2513.783 kb on + strand, within PP_2207 at 2513.783 kb on + strand, within PP_2207 at 2513.784 kb on - strand, within PP_2207 at 2514.197 kb on + strand, within PP_2207 at 2514.197 kb on + strand, within PP_2207 at 2514.198 kb on - strand, within PP_2207 at 2514.198 kb on - strand, within PP_2207 at 2514.338 kb on + strand at 2514.338 kb on + strand at 2514.338 kb on + strand at 2514.339 kb on - strand at 2514.339 kb on - strand at 2514.513 kb on + strand at 2514.513 kb on + strand at 2514.540 kb on + strand at 2514.540 kb on + strand at 2514.540 kb on + strand at 2514.540 kb on + strand at 2514.540 kb on + strand at 2514.541 kb on - strand at 2514.541 kb on - strand at 2514.541 kb on - strand at 2514.648 kb on - strand, within PP_2208 at 2514.844 kb on + strand at 2514.845 kb on - strand, within PP_2208 at 2514.928 kb on + strand, within PP_2208 at 2514.929 kb on - strand, within PP_2208 at 2514.929 kb on - strand, within PP_2208 at 2514.929 kb on - strand, within PP_2208 at 2514.944 kb on + strand, within PP_2208 at 2514.944 kb on + strand, within PP_2208 at 2514.945 kb on - strand, within PP_2208 at 2515.118 kb on + strand, within PP_2208 at 2515.119 kb on - strand, within PP_2208 at 2515.119 kb on - strand, within PP_2208 at 2515.209 kb on + strand, within PP_2208 at 2515.210 kb on - strand, within PP_2208
Per-strain Table
Position Strand Gene LocusTag Fraction Isobutyl alcohol 0.6 vol% remove 2,512,374 + PP_2206 0.44 +0.4 2,512,375 - PP_2206 0.44 +0.7 2,512,375 - PP_2206 0.44 -0.6 2,512,375 - PP_2206 0.44 +1.8 2,512,375 - PP_2206 0.44 +0.1 2,512,375 - PP_2206 0.44 -1.2 2,512,534 - +0.3 2,512,590 + PP_2206 0.61 -1.6 2,512,617 + PP_2206 0.63 +0.0 2,512,617 + PP_2206 0.63 -0.1 2,512,947 + +2.3 2,512,947 + PP_2206 0.89 +0.4 2,512,948 - PP_2206 0.89 +0.1 2,513,053 - -1.2 2,513,174 - -0.1 2,513,245 + +0.8 2,513,246 - +0.7 2,513,246 - -0.5 2,513,255 + -0.9 2,513,256 - -0.2 2,513,293 - -0.5 2,513,361 - -0.8 2,513,361 - -0.4 2,513,550 - PP_2207 0.26 -0.7 2,513,712 + PP_2207 0.41 -2.1 2,513,783 + PP_2207 0.48 +0.5 2,513,783 + PP_2207 0.48 -0.5 2,513,784 - PP_2207 0.48 -1.6 2,514,197 + PP_2207 0.86 +0.1 2,514,197 + PP_2207 0.86 -0.7 2,514,198 - PP_2207 0.87 -0.5 2,514,198 - PP_2207 0.87 -0.2 2,514,338 + -2.0 2,514,338 + -0.6 2,514,338 + -0.6 2,514,339 - +0.9 2,514,339 - +0.4 2,514,513 + -0.3 2,514,513 + -0.3 2,514,540 + +0.0 2,514,540 + -0.4 2,514,540 + +0.3 2,514,540 + +0.3 2,514,540 + -0.9 2,514,541 - -0.5 2,514,541 - +0.4 2,514,541 - +1.0 2,514,648 - PP_2208 0.11 -1.1 2,514,844 + +1.3 2,514,845 - PP_2208 0.35 -0.8 2,514,928 + PP_2208 0.45 +0.2 2,514,929 - PP_2208 0.45 +0.5 2,514,929 - PP_2208 0.45 -0.6 2,514,929 - PP_2208 0.45 +0.2 2,514,944 + PP_2208 0.46 -0.6 2,514,944 + PP_2208 0.46 +0.4 2,514,945 - PP_2208 0.47 +0.5 2,515,118 + PP_2208 0.68 -1.0 2,515,119 - PP_2208 0.68 -0.1 2,515,119 - PP_2208 0.68 -1.0 2,515,209 + PP_2208 0.79 -0.3 2,515,210 - PP_2208 0.79 -0.7
Or see this region's nucleotide sequence